BGIOSGA034390

From RiceWiki
Revision as of 08:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034390| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034390, complete gene.| tag = OS11G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA034390

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034390, complete gene.

LocusTag

OS11G0180100

Ensembl Transcript ID

BGIOSGA034390-TA

Ensembl Protein ID

BGIOSGA034390-PA

Length

3151

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3808443..3811593

Sequence Coding Region

3811342..3811593,3810452..3810783),complement(3810250..3810342,3810054..3810144),complement(3809881..3809947
,3809685..3809782),complement(3809415..3809591,3809137..3809253),complement(3808956..3809032
,3808828..3808872),complement(3808443..3808731

Genome Context

<gbrowseImage1> name=IndicaChromosome11:3808443..3811593 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:3808443..3811593 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGATGAGTCGTTTCTGCTCTGTGGTTGGCATCGTTTGCGGCTCCCCGTCGTCTTCAGGCGATGAAGCTTTTGCTTCCCATGGCGAGCAGCAGCAGGCGACGACGACGACGACGGCGCAGTCTTCTGGGAAGAGCTCGAGCTCGAGGAGGAAGACGGCGCCGGAGGCCTCCGGCGAGCACAAGGCGGGCGGTGAAGCGCCGCCACCGGCATCCAAGAAGACAGCATTGCTCGACAAGGGCAAAGAGAAGGTATCAGAAATGGACACTTCTGTCAGGAGAACCAGCAAAGGAATATCAGGCAATCCATCAGAGGATTCCAACAAACCAGTGGCTAAATCTCCGACACTGAAGACCGTGATCGGCAGCATAAGGAACTATATTGCTACCAAAAAGGGTAGAAAAATAAAGATCCTGGCCTTTGAGGTAGCCAACACAATTGCCATGGGTTCCAACCTGATGAACTTCCTCTCCGAGGAAAACATAAGGTACCTGAAACGTGTTGTGCTTCAGAACCAAGGCGTCCAAAGTCTGATCTCAGATGATCAGAGCCAGTTGCTTGCTCTTGTTGGGGATGAAATTAGACAACAGTTCAAAGATTTTGCGGCATCTGTTGCTAGGCTTGGGAACATGTGCAGGGATCCCAAATGGCACAATCTTGATGAGCATTTCTCTGGATTGGAGTATGGTCCCATAACTCAGGAGTATTCCCATGAAAAAGCAGCATCCAAGATGGAGGATCTGATGGAACTTGTGACTAAGACAAAGATACTGTTTGAAGCATTGCGCCGATTGGGAGTCTCCGAGAAGATGTACAGGGAAGCCAAGCAGACAGGTATGCCACTTGAGACTTTCCAAAATGCGGTGAACATTGAAAAAGAAATCGTGCAAAGCGCAAAGAAGAAAGCACTTTGGGTCAAGAAGATTGAAAAAATTGTGGAGGAACTTGTGTACATTGTGCATTACTTGCCTTCTGAGATCAATTGTGTCTTCTACAAGGAACATGAAGAGGATAGATCTGTGAAGGCTAATGGGAGCCCTCAGCAAACTTTAGGGTCTGCTGATCTCCATCTGAATTACGCAAGGATCGTTATCGCCATACAAGTTTTGGTATCCGTCGCATCATCGGTTCCGCAATGTGCTGTAGATTCATTGTTCCATGCACTGCCTTATAGAATCAGATCAGTTTTGCTACCTAGGATGAGACACGGCGATTTTGACGACCAGAGGACAGAAACGCAGATCGCCGATGAGATGACCAGGAGACTTGAATGGCTCTACCCAATGGCAGAATTTACAATAAGGCTGTCTCAGCACACTGGAATGATCAGAGAATGCCTGGTATCAGGGAGCCTCAGTGACCGTGATCAACGTAAGATGCTCAAGGTTCAGACACTGTACCATGCTGATAAGATGAAGACTGATGGCTGCATCATTGACATGGTGATGGACCTTCATCTTCTCATAAAAGCCGCGAGACTGAGGGCTGATGCACCGCACCATAGCGGTCCTCTTGATCAACCAGTGAGTACCAGTGGATCATCAACCAGCTCGGCTAGCACAGGCATCAGTGGATCGACCAGCTTCGGTAACATTAGCACCACTTGGTCAGATATTGATGAAGATTTCATCGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MKMSRFCSVVGIVCGSPSSSGDEAFASHGEQQQATTTTTAQSSGKSSSSRRKTAPEASGEHKAGGEAPPPASKKTALLDKGKEKVSEMDTSVRRTSKGISGNPSEDSNKPVAKSPTLKTVIGSIRNYIATKKGRKIKILAFEVANTIAMGSNLMNFLSEENIRYLKRVVLQNQGVQSLISDDQSQLLALVGDEIRQQFKDFAASVARLGNMCRDPKWHNLDEHFSGLEYGPITQEYSHEKAASKMEDLMELVTKTKILFEALRRLGVSEKMYREAKQTGMPLETFQNAVNIEKEIVQSAKKKALWVKKIEKIVEELVYIVHYLPSEINCVFYKEHEEDRSVKANGSPQQTLGSADLHLNYARIVIAIQVLVSVASSVPQCAVDSLFHALPYRIRSVLLPRMRHGDFDDQRTETQIADEMTRRLEWLYPMAEFTIRLSQHTGMIRECLVSGSLSDRDQRKMLKVQTLYHADKMKTDGCIIDMVMDLHLLIKAARLRADAPHHSGPLDQPVSTSGSSTSSASTGISGSTSFGNISTTWSDIDEDFIA</aaseq>

Gene Sequence

<dnaseqindica>1..252#811..1142#1252..1344#1450..1540#1647..1713#1812..1909#2003..2179#2341..2457#2562..2638#2722..2766#2863..3151#ATGAAGATGAGTCGTTTCTGCTCTGTGGTTGGCATCGTTTGCGGCTCCCCGTCGTCTTCAGGCGATGAAGCTTTTGCTTCCCATGGCGAGCAGCAGCAGGCGACGACGACGACGACGGCGCAGTCTTCTGGGAAGAGCTCGAGCTCGAGGAGGAAGACGGCGCCGGAGGCCTCCGGCGAGCACAAGGCGGGCGGTGAAGCGCCGCCACCGGCATCCAAGAAGACAGCATTGCTCGACAAGGGCAAAGAGAAGGTATGATATCTATAGGTTACTACTCATGTTCGTCTTCATCTTCTTATTTGAAGAGCAGATGCTACTCTTTCTTGATGCTTGCTAATTTTGTGGTTAAAAACTGGATTTGATGCAGTGGTTTGATGCATTGATTTGATTTCTTTGGGATGAAAGTTTCAGAAATGGTGGTGTTCCAGGGAGAAGAATATGCTAGGGCATCATCATGCATATGCTGGGTTGAGATAAAAAGAAACATCATAAATGTGGGATTTAGGATCTACGTTTTAAACATATTCACATTTTTTTTTTTGCGGGGAAGACACATTCACAGTTTTTTAATTTGTGGGGAAGACATATTCAGCTTTGTGTGTGTGTGTGTGTGTGGAAGACATATTAATAGATTTTTTTTTTATTTGTGGGGAAGACATATTCACAGTTTGGTTATGTTTTTGCGGATCATTCATGAAAATGCACCATTTCCTTTTAAAAGGAACCTATCTATTTCAATATTTGTGATGTGGCTAATCAAGAACAATACATCGTGCATCAATTAGACTAAATCTTTCTTTGATCATTTAGGTATCAGAAATGGACACTTCTGTCAGGAGAACCAGCAAAGGAATATCAGGCAATCCATCAGAGGATTCCAACAAACCAGTGGCTAAATCTCCGACACTGAAGACCGTGATCGGCAGCATAAGGAACTATATTGCTACCAAAAAGGGTAGAAAAATAAAGATCCTGGCCTTTGAGGTAGCCAACACAATTGCCATGGGTTCCAACCTGATGAACTTCCTCTCCGAGGAAAACATAAGGTACCTGAAACGTGTTGTGCTTCAGAACCAAGGCGTCCAAAGTCTGATCTCAGATGATCAGAGCCAGTTGCTTGCTCTTGTTGGGGATGAAATTAGGTAATTAATGACTTTTTCTATAAATTTCAATGCTTTTACTATTTATATAAATTATTACTTATATGTGTTTTTCAAGATTTCTTACATTCATTGGGCTTGGTTTATGCAGACAACAGTTCAAAGATTTTGCGGCATCTGTTGCTAGGCTTGGGAACATGTGCAGGGATCCCAAATGGCACAATCTTGATGAGCATTTCTCTGGGTAAAATTTTAGCTGCCACCACATTACTGTTCTTGTATAATTCATGGCTCAATCATATTTTATTCTATCTGAGTGTTCATTTGTGTGCCTCTTGTCACTGCGCAGATTGGAGTATGGTCCCATAACTCAGGAGTATTCCCATGAAAAAGCAGCATCCAAGATGGAGGATCTGATGGAACTTGTGACTAAGACAAAGGTGTGTTAGTCACATATTTTCTAATGTCATTACCACTGTTGGTTCAACACATTTTCTTTTTAGGAACCACTGAAATGATGTTGCTGTTCTATTTTCTTCTGTGCAGATACTGTTTGAAGCATTGCGCCGATTGGGAGTCTCCGAGAAGATGTACAGGGAAGCCAAGCAGACAGGTGCTTCCCAAAACCATTTGTGTGATCAGCACAACTAATCAGAAATATGTCTATTTATGTTCTTCACATCAGTTCTTAACATTTTTTTATATGTGCAGGTATGCCACTTGAGACTTTCCAAAATGCGGTGAACATTGAAAAAGAAATCGTGCAAAGCGCAAAGAAGAAAGCACTTTGGGTCAAGAAGATTGAAAAAGTACGTAAAAACTGTGTGATATGATGATTAATGTTTATCACATTTTTCAATAACGAATTTATGTTAAATACACAAATGCTGTTTCTGTTGCAGATTGTGGAGGAACTTGTGTACATTGTGCATTACTTGCCTTCTGAGATCAATTGTGTCTTCTACAAGGAACATGAAGAGGATAGATCTGTGAAGGCTAATGGGAGCCCTCAGCAAACTTTAGGGTCTGCTGATCTCCATCTGAATTACGCAAGGATCGTTATCGCCATACAAGTTTTGGTAAGATTCTTTGACAGTCATTAGGCCATTGTTCTAGGATCTTGGTCATTGATCAAGTGTAGTCGTGCATGATATAAACATATTTCCGGTTTTCAGTTGATTTGGCACACTAACTGAAATGTCGAAACTGATTTTATTTGCTCATAAAGTTTCAATCGCAGGTATCCGTCGCATCATCGGTTCCGCAATGTGCTGTAGATTCATTGTTCCATGCACTGCCTTATAGAATCAGATCAGTTTTGCTACCTAGGATGAGACACGGCGATTTTGACGACCAGGTGACCACTCTTTTCTGTCAATTCCGATTACCTGACAAAAATGTGTATCCTGTATATACTGTTCATCTTCATTTCTTTCTGAACTTTGCATCTTCTTATTGCAGAGGACAGAAACGCAGATCGCCGATGAGATGACCAGGAGACTTGAATGGCTCTACCCAATGGCAGAATTTACAATAAGGTACTGTAATCTCTTGCCATATACACCAGGTTCATTCAATGAATAATAACCTGATGCTCACCTTGTACATATCTGAACATCAGGCTGTCTCAGCACACTGGAATGATCAGAGAATGCCTGGTATCAGGGTATATAACTATGACTGTCGTGTCTATTTTGTCATGAACAATATGCAAAAGCACAATTGCTGATTTCACTAATAATTCCTCATGAAATTCTTGTAGGAGCCTCAGTGACCGTGATCAACGTAAGATGCTCAAGGTTCAGACACTGTACCATGCTGATAAGATGAAGACTGATGGCTGCATCATTGACATGGTGATGGACCTTCATCTTCTCATAAAAGCCGCGAGACTGAGGGCTGATGCACCGCACCATAGCGGTCCTCTTGATCAACCAGTGAGTACCAGTGGATCATCAACCAGCTCGGCTAGCACAGGCATCAGTGGATCGACCAGCTTCGGTAACATTAGCACCACTTGGTCAGATATTGATGAAGATTTCATCGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034390