Os11g0203900

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Revision as of 09:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0203900| Description = Conserved hypothetical protein| Version = NM_001073981.2 GI:297611428 GeneID:4350016| Length = 2880 bp| Definition ...")
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Gene Name

Os11g0203900

Description

Conserved hypothetical protein

Version

NM_001073981.2 GI:297611428 GeneID:4350016

Length

2880 bp

Definition

Oryza sativa Japonica Group Os11g0203900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5234900..5237779

Sequence Coding Region

5234900..5235000,5235357..5235485,5235615..5235864,5235966..5237687,5237753..5237779

Expression

GEO Profiles:Os11g0203900

Genome Context

<gbrowseImage1> name=NC_008404:5234900..5237779 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:5234900..5237779 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcccccgcttcggcagattcacctaagctgtacgacgaggcggcgcggcggctgcccttggacgagatcccggagctcgtcgactgcctcggcgaggtcggacactgcttcggcctcgccgaccccgtcagcaacatcatcctcaacgccatcgcccacctctccggatcaccgcccctccaactccaagaccacccaccgccgctcccccggaagaggacccgcaggagctacagcgagtggtgggggttcatctcatccacctctctcaacggcctcatcgccttcatgaaggtctatttccgctacctcaccggcgaccaggccaggcgctacctctacctcgcctcctacgacctcctcctcgccatcaagctggtccaccatgaccgccatctcccactcccgccatcccccctcctccccgacggtggcaagatgaagaacgccctccggatcgccgcgctcaaagcaggccaccccgcgcccgacgacctggcgcgcaccatgaccgcgcagtacccctctcatctactctcccctatcgtccacaagcttcaggggtcggacctgctcaccacccatgacgtccagtccatcaaggacctgctcctcaacgcattccaatggcccccgcccaacatggacttcttgtgctgcccaaatggcgagtcttgtgctcaagccgcccccaatggcaccttactgctggcgacatgcattgggcgaggcacttttgctcgagtttcgatcgaaattgaaactccaaatcaagttctatccgaccaactccgacaccttcctgacataacatttgatagggtagtgatggagacaaagctatctaagtgcatagcgaaaatcacaacctgcagtgttgattgtgaagaacctcaggaagaaatgcattatgatgcttccccgccatgcgagcacataatttccctgaacatgtgcctcctcgacaccatccattgcttctacatcagggcacttgccgtgctgcccctgcctggcgactccatgcgccgtggccgcctcctccacgcacttattgagttcggatactgctatggccccttagaccctgtgtcgaacatcatcatcaacgctgtctggtacaacgcctacgatgatatggccttttttgatggttcgtacccacagcctccacaggaaggcgacgccaatgacaagtatgagttgcaacaggagatatctgacaccagcgccatgtgtcgcatggcatcccgtacccttgatggcctcatcgccctcctccgtgccatcaccccaaccaccactggtgcacctctatcaaagcacgaggctgtggaatacctttggtccaggcagtgcgacctccgcgacaaactgcagcagactgtgatgacgaaaaagaacccctacgctgctgcagtcaaggcatcgaagcagcagcagcacaccatgcttgaatctttcctcaaatccctctccggcaagaagcttgatcgcctgcacggcttgctgaaatccactagcaatggttctcactgtgttatctcaaatgctgattgggaggagctaaacgcaatgatcaaagtgcagctaaccgaaatcttatgcagaagaagaaatcgtatgtttgattgtcaaacctcgacagcatcgtcaatgaaaagttcagaatatctgaaccagcagaagtttgttcgcagcaagctggaagaattgctagtcgcatactcgggacaacatccttgggaaccaagatataagcttgacctcatctgtggagtggaggaacctcaatcctaccactggagatgctaccatgctaacttcttggcaagcacccatggcactgtgctcaaactagatggtgaggcaaccacaacaccaaaccctgtgcgcacactcttcttcgctcaattctgggactcgcaacctggtcgattcaatgaatcaaactcaaagaccatctgctgccctgttcaagttagcacatgttttggtcgttgcaccttttgtgatgaagcaagcaaaattttacatccaccatgtctatctggaagttatcctgatgatggtgatgatgccgtcattcatgactacgatgttactgatgccattcttatgtatgctggaagtgaaagggatcgtatttcactaaaggctttgttcggctactatggatggattcacacagggagatccatatactgctaccatatatggatatga</cdnaseq>

Protein Sequence

<aaseq>MAPASADSPKLYDEAARRLPLDEIPELVDCLGEVGHCFGLADPV SNIILNAIAHLSGSPPLQLQDHPPPLPRKRTRRSYSEWWGFISSTSLNGLIAFMKVYF RYLTGDQARRYLYLASYDLLLAIKLVHHDRHLPLPPSPLLPDGGKMKNALRIAALKAG HPAPDDLARTMTAQYPSHLLSPIVHKLQGSDLLTTHDVQSIKDLLLNAFQWPPPNMDF LCCPNGESCAQAAPNGTLLLATCIGRGTFARVSIEIETPNQVLSDQLRHLPDITFDRV VMETKLSKCIAKITTCSVDCEEPQEEMHYDASPPCEHIISLNMCLLDTIHCFYIRALA VLPLPGDSMRRGRLLHALIEFGYCYGPLDPVSNIIINAVWYNAYDDMAFFDGSYPQPP QEGDANDKYELQQEISDTSAMCRMASRTLDGLIALLRAITPTTTGAPLSKHEAVEYLW SRQCDLRDKLQQTVMTKKNPYAAAVKASKQQQHTMLESFLKSLSGKKLDRLHGLLKST SNGSHCVISNADWEELNAMIKVQLTEILCRRRNRMFDCQTSTASSMKSSEYLNQQKFV RSKLEELLVAYSGQHPWEPRYKLDLICGVEEPQSYHWRCYHANFLASTHGTVLKLDGE ATTTPNPVRTLFFAQFWDSQPGRFNESNSKTICCPVQVSTCFGRCTFCDEASKILHPP CLSGSYPDDGDDAVIHDYDVTDAILMYAGSERDRISLKALFGYYGWIHTGRSIYCYHI WI</aaseq>

Gene Sequence

<dnaseqindica>2780..2880#2295..2423#1916..2165#93..1814#1..27#atggcccccgcttcggcagattcacctgttaccacggggaggaggagaagcgatggcaccctccggccaacgaaatcctccggtccatacagaagctgtacgacgaggcggcgcggcggctgcccttggacgagatcccggagctcgtcgactgcctcggcgaggtcggacactgcttcggcctcgccgaccccgtcagcaacatcatcctcaacgccatcgcccacctctccggatcaccgcccctccaactccaagaccacccaccgccgctcccccggaagaggacccgcaggagctacagcgagtggtgggggttcatctcatccacctctctcaacggcctcatcgccttcatgaaggtctatttccgctacctcaccggcgaccaggccaggcgctacctctacctcgcctcctacgacctcctcctcgccatcaagctggtccaccatgaccgccatctcccactcccgccatcccccctcctccccgacggtggcaagatgaagaacgccctccggatcgccgcgctcaaagcaggccaccccgcgcccgacgacctggcgcgcaccatgaccgcgcagtacccctctcatctactctcccctatcgtccacaagcttcaggggtcggacctgctcaccacccatgacgtccagtccatcaaggacctgctcctcaacgcattccaatggcccccgcccaacatggacttcttgtgctgcccaaatggcgagtcttgtgctcaagccgcccccaatggcaccttactgctggcgacatgcattgggcgaggcacttttgctcgagtttcgatcgaaattgaaactccaaatcaagttctatccgaccaactccgacaccttcctgacataacatttgatagggtagtgatggagacaaagctatctaagtgcatagcgaaaatcacaacctgcagtgttgattgtgaagaacctcaggaagaaatgcattatgatgcttccccgccatgcgagcacataatttccctgaacatgtgcctcctcgacaccatccattgcttctacatcagggcacttgccgtgctgcccctgcctggcgactccatgcgccgtggccgcctcctccacgcacttattgagttcggatactgctatggccccttagaccctgtgtcgaacatcatcatcaacgctgtctggtacaacgcctacgatgatatggccttttttgatggttcgtacccacagcctccacaggaaggcgacgccaatgacaagtatgagttgcaacaggagatatctgacaccagcgccatgtgtcgcatggcatcccgtacccttgatggcctcatcgccctcctccgtgccatcaccccaaccaccactggtgcacctctatcaaagcacgaggctgtggaatacctttggtccaggcagtgcgacctccgcgacaaactgcagcagactgtgatgacgaaaaagaacccctacgctgctgcagtcaaggcatcgaagcagcagcagcacaccatgcttgaatctttcctcaaatccctctccggcaagaagcttgatcgcctgcacggcttgctgaaatccactagcaatggttctcactgtgttatctcaaatgctgattgggaggagctaaacgcaatgatcaaagtgcagctaaccgaaatcttatgcagaagaagaaatcgtatgtttgattgtcaaacctcgacagcatcgtcaatgaaaagttcagaatatctgaaccagcagaagtttgttcgcagcaagctggaagaattgctagtcgcatactcgggacaacatccttgggtaaattcagagtagaaacgttttggctttttgattgattgcggcatttgctttcttccagtgtcctaaaattctgtccaactttgtgtttgttattgcaggaaccaagatataagcttgacctcatctgtggagtggaggaacctcaatcctaccactggagatgctaccatgctaacttcttggcaagcacccatggcactgtgctcaaactagatggtgaggcaaccacaacaccaaaccctgtgcgcacactcttcttcgctcaattctgggactcgcaacctggtcgattcaatgaatcaaactcaaagaccatctgctgccctgttcaagttagcacatgttttggtgagtcactgaactctttttgtgatgctcctactatattttagtcaagtaatagacacattgtggcaatcattattgcttttgcatgcatgttaataccctggattgtaattttggcttttctgacaggtcgttgcaccttttgtgatgaagcaagcaaaattttacatccaccatgtctatctggaagttatcctgatgatggtgatgatgccgtcattcatgactacgatgttactgatgccattcttatgtatggttctgtttaacccattcgtatctatgattttgtttcacccaaaattagcaaagacaagggcaagttttggtcttaagtgcttgttaagaggatgagaagcaactgcagaactaacggaagaagtgctgaagaggatcagcttttgtaatttgttctgctggagtacccttttgtgtctgaacaaaatgttttagtggaggtctggtctttagtttatgctggatgtgactagattacttttggtttatgctggatgtgactagattacttttggtttatgctggatgtgactagattactcgtggtgttggtaggtatttttgttcttgttttcttttgctgttaatgtttgcagctggaagtgaaagggatcgtatttcactaaaggctttgttcggctactatggatggattcacacagggagatccatatactgctaccatatatggatatga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0203900, RefSeq:Os11g0203900