BGIOSGA034500

From RiceWiki
Revision as of 08:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034500| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034500, complete gene.| tag = OS11G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA034500

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034500, complete gene.

LocusTag

OS11G0148500

Ensembl Transcript ID

BGIOSGA034500-TA

Ensembl Protein ID

BGIOSGA034500-PA

Length

3669

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1975031..1978699

Sequence Coding Region

1978631..1978699,1978414..1978510),complement(1978223..1978320,1977982..1978137),complement(1977728..1977805
,1977468..1977599),complement(1977245..1977325,1976973..1977044),complement(1976802..1976891
,1976464..1976608),complement(1976305..1976393,1976071..1976166),complement(1975854..1975921
,1975667..1975766),complement(1975479..1975538,1975031..1975183

Genome Context

<gbrowseImage1> name=IndicaChromosome11:1975031..1978699 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:1975031..1978699 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCATTCGACGAATCTGCTGCTGGAGGAGCCCATCAGGATGGCATCCATCCTGGAGCCATCCAAGCCGAGCTTTTTCCCGGCGATGACCAAGATCGTGGGGACGCTGGGTCCCAAGTCGCGCGCCGTCGACACCATCTCCTCCTGCCTCAAGGCCGGCATGTCGGTTGCCAGGTTCGATTTCTCGTGGGGAGACGCTGAGTACCACCAGGAAACCCTCGAAAACCTCAAGCTCGCCATCAAGTCCACCAAGAAGCTCTGCGCTGTCATGCTCGACACTGTCGGCCCGGAGTTGCAGGTGGTGAACAAGAGTGAGGCTGCAATCTCCCTTGAAGCGAATGGCACTGTTGTTCTCACCCCTGACCAGGGGCAGGAGGCCTCCTCCGAATTGCTGCCCATCAACTTCTCCGGGCTTGCTAAGGCTCTGAAACCAGGTGCTACAATTTTTGTGGGGCAATACTTGTTCACTGGCAGTGAGACTACTTCAGTTTGGTTAGAGGTTTCTGAAGTTAAAGGAGATGATGTGGTTTGTGTGATAAAAAATTCGGCTACTCTGGCTGGTTCACTGTTCACCCTGCATTGTTCTCAGATTCATATCGACTTACCTACACTGTCTGATGAGGACAAGGAGGTTATCAGAAGATGGGGAGCTCCAAACAAGATTGACTTCCTCTCTCTGTCTTATACAAGACACGCGGAAGATGTGCGACAGGCACGTGAGTTCCTCTCAAAGTTAGGCGACCTTAGCCAAACTCAGATTTTTGCCAAAATTGAGAATGTTGAGGGTTTGAATCATTTTGATGAAATCCTGCAAGAGGCGGATGGTATCATTCTGTCAAGAGGAAACCTTGGAATTGATCTTCCACCTGAAAAGGTGTTTTTGTTTCAAAAGTCTGCTCTGCACAAGTGCAACATGGCTGGAAAGCCTGCTGTTGTTACTCGTGTTGTGGACAGTATGACTGACAACCTCAGGCCTACTCGTGCGGAGGCTACTGATGTGGCAAATGCTGTACTTGACGGGAGTGATGCCATTCTCCTTGGTGCTGAGACTCTCCGTGGTCTGTACCCAGTTGAGACTATCTCAATTGTGGGCAAAATTTGCGCTGAGGCAGAGAAGGTATTCAACCAAGATTTATACTTCAAGCGGACTGTGAAATATGTTGGGGAGCCCATGACCCACTTGGAGTCTATCGCTTCTTCTGCGGTGCGAGCTGCTATCAAAGTGAAGGCTTCTGTCATTATTTGCTTCACATCATCTGGACGCGCTGCAAGACTAATTGCCAAGTACAGGCCCACCATGCCTGTTCTATCTGTTGTCATTCCTCGTCTGAAAACAAACCAACTGAGGTGGAGTTTCACTGGCGCATTTGAAGCAAGACAATCACTCATAGTTAGAGGTCTCTTTCCGATGCTTGCTGATCCTCGCCATCCAGCTGAATCGACCAGCGCTACCAATGAGTCAGTTTTGAAGGTTGCTCTTGACCATGGCAAAGCTTCCGGTGTGATCAAGTCGCATGATCGCGTTGTTGTCTGCCAGAAAGTGGGTGATTCCTCGGTTGTGAAGATCATTGAGCTGGACGATTAG</cdnaseq>

Protein Sequence

<aaseq>MHSTNLLLEEPIRMASILEPSKPSFFPAMTKIVGTLGPKSRAVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKLAIKSTKKLCAVMLDTVGPELQVVNKSEAAISLEANGTVVLTPDQGQEASSELLPINFSGLAKALKPGATIFVGQYLFTGSETTSVWLEVSEVKGDDVVCVIKNSATLAGSLFTLHCSQIHIDLPTLSDEDKEVIRRWGAPNKIDFLSLSYTRHAEDVRQAREFLSKLGDLSQTQIFAKIENVEGLNHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALHKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKRTVKYVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLRWSFTGAFEARQSLIVRGLFPMLADPRHPAESTSATNESVLKVALDHGKASGVIKSHDRVVVCQKVGDSSVVKIIELDD</aaseq>

Gene Sequence

<dnaseqindica>1..69#190..286#380..477#563..718#895..972#1101..1232#1375..1455#1656..1727#1809..1898#2092..2236#2307..2395#2534..2629#2779..2846#2934..3033#3162..3221#3517..3669#ATGCATTCGACGAATCTGCTGCTGGAGGAGCCCATCAGGATGGCATCCATCCTGGAGCCATCCAAGCCGGTAAGACCTCCTCCTCCTCCTCGCCTTCGATGATTTCGCCTCAGATTTTTGCTGGTTTTGGTTCTGGTTGGAATTGGATTGAATGGAACCCTAACTCGCTTAATTAATTTCGCCTCCAAGAGCTTTTTCCCGGCGATGACCAAGATCGTGGGGACGCTGGGTCCCAAGTCGCGCGCCGTCGACACCATCTCCTCCTGCCTCAAGGCCGGCATGTCGGGTAACGGATCAGCCAGCTTCGATCTCCTCTTACCTCCACCCATTGCGCACTGTTCTAATCTAATCCTTTCTTCGTGTGTGGTGGAAATTGCAGTTGCCAGGTTCGATTTCTCGTGGGGAGACGCTGAGTACCACCAGGAAACCCTCGAAAACCTCAAGCTCGCCATCAAGTCCACCAAGAAGCTCTGCGCTGTGAGTTCTCCTGACAATTCATTCATGATCTACTAGTTAGTCTTGCTGTCTACTAACATTTGGGAGTCCTCTCGTTGTTGCGCAGGTCATGCTCGACACTGTCGGCCCGGAGTTGCAGGTGGTGAACAAGAGTGAGGCTGCAATCTCCCTTGAAGCGAATGGCACTGTTGTTCTCACCCCTGACCAGGGGCAGGAGGCCTCCTCCGAATTGCTGCCCATCAACTTCTCCGGGCTTGCTAAGGTATACCTTCAGTAGTTCAGTGTTATTTATATGAAATATTATGATTGTTTTTACTTTTGTTGCAATCAGATCGGTCCTTGACTGTTTCCTAGAGAAATTTTGTATGTTACCATTACGTCACCGCAATTTGTAGCATCTGCTATGTGAAAAAAAATGACTCTTTTTGTCCTTTGCAGGCTCTGAAACCAGGTGCTACAATTTTTGTGGGGCAATACTTGTTCACTGGCAGTGAGACTACTTCAGTTTGGTTAGAGGTAAAAATCTTCAGCATGCTAAAACTGGTGTTCTGTGTTTGTGATGTGTAATGTGTTACGTCCTTGTTAGTAGGATGTGCTTGCTGTCTACATTTTCTGATACCTAATCTCCATTCTGCTTGATATAGGTTTCTGAAGTTAAAGGAGATGATGTGGTTTGTGTGATAAAAAATTCGGCTACTCTGGCTGGTTCACTGTTCACCCTGCATTGTTCTCAGATTCATATCGACTTACCTACACTGTCTGATGAGGACAAGGAGGTAAGGATCGATCTTATCTCTTAGCTAACTGTAGCAATATGAATATTTCTAGTAAAACTATTATTATTTCTCAAGTTTGATTCCCTCACTCAAACCATCTGTAGTAGTGGTATTAAAGCTTAAGAGTATGCACTGATTCCAGGTTATCAGAAGATGGGGAGCTCCAAACAAGATTGACTTCCTCTCTCTGTCTTATACAAGACACGCGGAAGATGTGCGACAGGTTAGTGACTAATTACAGTATGGGTAGAGATGCATTTTCCTCATATTTCCTGTTTGCCCGTTGTGCTTGAAAGTTTTGCAAGTCTACTGTACAGTGAAAATATTGCATGTCTATATTCCAATATATACTCTCCTCTACCTCTTCATTTGGTATTTGGGAAGAAATTCTAAACAGTGCTGGAATTTCTCCTTACATTACAGGCACGTGAGTTCCTCTCAAAGTTAGGCGACCTTAGCCAAACTCAGATTTTTGCCAAAATTGAGAATGTTGAGGTATTTGCAACATACTCTTTATATATTTCTTAGCCAACTTTGATTTGTTCTACCACCTATCAACTCTTTATTTATTTGCAGGGTTTGAATCATTTTGATGAAATCCTGCAAGAGGCGGATGGTATCATTCTGTCAAGAGGAAACCTTGGAATTGATCTTCCACCTGAAAAGGTTAGTATCTTATTTTTGACTTATTTTAGCAGTTCAGAGGGCATTGATTAATTAATACTCCTACATACTCTGCTTCTTTTTATTTGGCTATGAAGCTTTTAGTGGCAGAGTCCTCAAGTTCTTTAGCAAGAATTGCTCTGTTTTCAATTTGATATGTAATTTGCTTACTGATCTTTAACTTCTGGTACTGTAGGTGTTTTTGTTTCAAAAGTCTGCTCTGCACAAGTGCAACATGGCTGGAAAGCCTGCTGTTGTTACTCGTGTTGTGGACAGTATGACTGACAACCTCAGGCCTACTCGTGCGGAGGCTACTGATGTGGCAAATGCTGTACTTGACGGTGAGTTGTTTGAGTTGTTGATGATGTTAATTGCCTTCTGAAAAATCTGAACCATATATTTTTTGTTCAGGGAGTGATGCCATTCTCCTTGGTGCTGAGACTCTCCGTGGTCTGTACCCAGTTGAGACTATCTCAATTGTGGGCAAAATTTGCGCTGAGGTGAATTTTCTTTCTACTTTTATGTTTTTTCTTTACAATTTTCAACAAGTACAATGAAAATTCACTTCTTGTTTTTCTGTCTATATCAGTCTGTTAGTAACATGATTTAGTCATATTTGTTTGTCCATTGTTTCACAGGCAGAGAAGGTATTCAACCAAGATTTATACTTCAAGCGGACTGTGAAATATGTTGGGGAGCCCATGACCCACTTGGAGTCTATCGCTTCTTCTGCGGTGTGTTTCTTCTCTTGTTCCCAAAATTTCTTAACGTTTATTGTGCACATATAAAATATTTTTGACTATTCCATTGTTTTTTGCTTCACAAAGTCTTTATATGAAACAAGGGTTTCTTAGTCTGAAATTGTTTCTTGCCTATTTTGCAGGTGCGAGCTGCTATCAAAGTGAAGGCTTCTGTCATTATTTGCTTCACATCATCTGGACGCGCTGCAAGGTAGAAAGATGTGAATATAAACAGGATAATGGTGTAGTTTAATCAAAACTAATTTCATATTTCATCTGGTATCTGTAATGTCTGCAGACTAATTGCCAAGTACAGGCCCACCATGCCTGTTCTATCTGTTGTCATTCCTCGTCTGAAAACAAACCAACTGAGGTGGAGTTTCACTGGCGCATTTGAAGTATGTAATCAGTCCTTCCCTTCTATGTTTATGATCTTTTTTCTGATTTTTTTCATGTAACATGCTTTCTGTTATCTGGTTTATGCCTGACTATTGTATCTCATATTTCTCGTATGCTTTTCTTTCAGGCAAGACAATCACTCATAGTTAGAGGTCTCTTTCCGATGCTTGCTGATCCTCGCCATCCAGTAAGTACTATTGCAAAATATTTGTGCAAAACACACTTGGTGGATTCTTTTTCAATTAAACAACACACGGCCTTTTATCATGGGGGAGGAATGAACTCTTGCAGATTTCTAATACATATCAATGCCTATTAGATATATAGCATTAAACATAACATGCTAGTCTTATTGCTTGCATCATGTCCCACTGTTATTGAAATGTTATCGACCACAAATGTTTGAAAGCAATAGCGGTATATGCAGTTAAGTTCCAAACGATTTGCTAGGACCCTTGTTGATCTTTCACCTTGTCCTGCAGGCTGAATCGACCAGCGCTACCAATGAGTCAGTTTTGAAGGTTGCTCTTGACCATGGCAAAGCTTCCGGTGTGATCAAGTCGCATGATCGCGTTGTTGTCTGCCAGAAAGTGGGTGATTCCTCGGTTGTGAAGATCATTGAGCTGGACGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034500

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA034500&oldid=36476"