BGIOSGA034516

From RiceWiki
Revision as of 08:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034516| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034516, complete gene.| tag = OS11G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA034516

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034516, complete gene.

LocusTag

OS11G0143200

Ensembl Transcript ID

BGIOSGA034516-TA

Ensembl Protein ID

BGIOSGA034516-PA

Length

2827

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1787679..1790505

Sequence Coding Region

1789792..1790505,1789371..1789649),complement(1788643..1788729,1788399..1788477),complement(1788174..1788280
,1787923..1788059),complement(1787679..1787781

Genome Context

<gbrowseImage1> name=IndicaChromosome11:1787679..1790505 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:1787679..1790505 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGGCCCCGGTGCTCCTCCTCGCCGCGGCCGCCGCCGTCGTCGTGGTTGCCATGGTGCTCAGATGGCTCCTCCTCCTCGGGGGCCCCGCCGCCGGGAGGCTGGGGAAGAGGGCGCTGATGCCGCCGGGGAGCACGGGCCTGCCGCTGATTGGCGAGACGCTGCGGCTCATCTCGGCGTACAAGACGCCCAACCCGGAGCCGTTCATCGACGAGCGCGTGGCGCGCCACGGCGGCGTGTTCACCACCCACGTCTTCGGCGAGCGCACCGTGTTCTCCGCCGACCCGGCCTTCAACCGCCTCCTCCTCGCCGCCGAGGGCCGCGCCGTCCACTCCAGCTACCCGTCCTCCATCGCCACGCTCCTCGGCGCGCGCTCCCTGCTCCTCACCCGCGGCGCCGCGCACAAGCGGCTCCACTCCCTCACCCTCACCCGCCTCGGCCGCCCCGCGTCGCCGCCCCTCCTCGCGCACATCGACCGCCTCGTGCTCGCCACCATGCGCCAGTGGGAGCCCGCCGCCACCGTGCGCCTCATGGACGAGGCCAAGAAAATCACCTTCAACCTCACCGTCAAGCAGCTCGTCAGCATCGAGCCGGGACCGTGGACCGAGAGCCTCCGCCGCGAGTACGTCAAGCTCATCGACGGCTTCTTCTCCATCCCCTTTCCTCTCGCCAACCTCCTCCCTTTTACCACCTACGGCCAGGCCCTCAAGGCGAGGAAGAAGGTGGCCGATGCACTGCGGGAGGTGATAAAGAAGAGGATGGAGGAGAAAGCGGAGAATGGTGGCTCCATTGGGGATGATGAGGGGAAGAAGGAGAAGAAGGACATGGTTGAGGAGCTTCTTGAGGCGGAGGGTGGCAGCTTCTCGGAGGAAGAGATGGTGGATTTCTGCCTTTCTCTGCTGGTGGCTGGGTATGAGACTACGTCCGTGCTCATGACGCTCGCGGTCAAGTTCCTCACTGAGACGCCTGCTGCGCTAGCTGAGCTCAAGGAAGAGCATGCCAATATCAGGGATATGAAAGGGAAAAAACAACCACTAGAGTGGAGTGATTACAAGTCCATGCCATTTACTCAATGTGTGATAAATGAGACACTCCGTGTGGGTAACATTATTAGTGGAGTATTCAGGCGAGCAAACACTGATATTCATTATAAAGATTACACAATTCCAAAGGGATGCAAGATTTTTGCTTCATTCCGAGCTGTGCACCTTAATAATGAACACTACGAGAATGCTCGGACATTTAACCCTTGGAGATGGCAGATCAACAATAAACTTCAGAATGCGGTAGGGGCCAATATATTTACTCCATTTGGTGGTGGACCCCGGTTGTGTCCTGGCTATGAGCTTGCCCGGGTTGTCGTTTCTATCTTCCTCCATCATCTTGTAACGCGCTTTAGCTGGGAAGAAACCGAAGAAGATAGACTTGTCTTCTTCCCCACCACACGAACTCTCAAAGGATACCCTATCAATCTTCGTCTGCTTTCAGAATCAATTTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAPVLLLAAAAAVVVVAMVLRWLLLLGGPAAGRLGKRALMPPGSTGLPLIGETLRLISAYKTPNPEPFIDERVARHGGVFTTHVFGERTVFSADPAFNRLLLAAEGRAVHSSYPSSIATLLGARSLLLTRGAAHKRLHSLTLTRLGRPASPPLLAHIDRLVLATMRQWEPAATVRLMDEAKKITFNLTVKQLVSIEPGPWTESLRREYVKLIDGFFSIPFPLANLLPFTTYGQALKARKKVADALREVIKKRMEEKAENGGSIGDDEGKKEKKDMVEELLEAEGGSFSEEEMVDFCLSLLVAGYETTSVLMTLAVKFLTETPAALAELKEEHANIRDMKGKKQPLEWSDYKSMPFTQCVINETLRVGNIISGVFRRANTDIHYKDYTIPKGCKIFASFRAVHLNNEHYENARTFNPWRWQINNKLQNAVGANIFTPFGGGPRLCPGYELARVVVSIFLHHLVTRFSWEETEEDRLVFFPTTRTLKGYPINLRLLSESIC</aaseq>

Gene Sequence

<dnaseqindica>1..714#857..1135#1777..1863#2029..2107#2226..2332#2447..2583#2725..2827#ATGGCCGCGGCCCCGGTGCTCCTCCTCGCCGCGGCCGCCGCCGTCGTCGTGGTTGCCATGGTGCTCAGATGGCTCCTCCTCCTCGGGGGCCCCGCCGCCGGGAGGCTGGGGAAGAGGGCGCTGATGCCGCCGGGGAGCACGGGCCTGCCGCTGATTGGCGAGACGCTGCGGCTCATCTCGGCGTACAAGACGCCCAACCCGGAGCCGTTCATCGACGAGCGCGTGGCGCGCCACGGCGGCGTGTTCACCACCCACGTCTTCGGCGAGCGCACCGTGTTCTCCGCCGACCCGGCCTTCAACCGCCTCCTCCTCGCCGCCGAGGGCCGCGCCGTCCACTCCAGCTACCCGTCCTCCATCGCCACGCTCCTCGGCGCGCGCTCCCTGCTCCTCACCCGCGGCGCCGCGCACAAGCGGCTCCACTCCCTCACCCTCACCCGCCTCGGCCGCCCCGCGTCGCCGCCCCTCCTCGCGCACATCGACCGCCTCGTGCTCGCCACCATGCGCCAGTGGGAGCCCGCCGCCACCGTGCGCCTCATGGACGAGGCCAAGAAAATCACCTTCAACCTCACCGTCAAGCAGCTCGTCAGCATCGAGCCGGGACCGTGGACCGAGAGCCTCCGCCGCGAGTACGTCAAGCTCATCGACGGCTTCTTCTCCATCCCCTTTCCTCTCGCCAACCTCCTCCCTTTTACCACCTACGGCCAGGCCCTCAAGGTGCTCGTCCTTTTGCCTCCATTCATTTTTTTTAATCTTTCCCTATGCATCTTACATTGCCTTACAACGAATTGGCGTCAGCTATTGATGTACTCTTATATCTCTTATAAAAATGTGGCATTGCATGATTTGATTCCTGCAGGCGAGGAAGAAGGTGGCCGATGCACTGCGGGAGGTGATAAAGAAGAGGATGGAGGAGAAAGCGGAGAATGGTGGCTCCATTGGGGATGATGAGGGGAAGAAGGAGAAGAAGGACATGGTTGAGGAGCTTCTTGAGGCGGAGGGTGGCAGCTTCTCGGAGGAAGAGATGGTGGATTTCTGCCTTTCTCTGCTGGTGGCTGGGTATGAGACTACGTCCGTGCTCATGACGCTCGCGGTCAAGTTCCTCACTGAGACGCCTGCTGCGCTAGCTGAGCTCAAGGTATAAAACTATTTAAATTAGTTGTTTGGTAGTAATTGTCAATTCTTGTATACACGTGCGGTAGTAGGTACCAGGTGCTGTCAATTGTCAAATAACGCCTGAAATAGGGAGGAATTTCATTTATTATAGTTGAGTGTTAATTGTTAAAAATATGGTTGTTAGACTATCTTTCACACCAATTCTGTCCAAAAGAGAAGTTTCTACTTTCTATTTCCGGTCTGTTGTTTTTAGTCAAGTTCACTACAGCTTTGTTCCTGGTTTGTTATTGACTTGAATACTTGATCCTGAGTATTAATTTATTATTGACTCGAACCATTTATGTTCTTGAGTCCTGACTTCTTTTAGTTTAACTGTGTAAGAATGAATCTTCAGTTCAGTCAGTACTCTGGTTTCCTCATTTTATTTTTTTCTCATTTTATTTACTTGCATTGATGAGTGCTAGGTTCCTCAGTCTAACAACAAAGCGAGAGAATCGTAGCAATAATATCACAATAGGTCCAAATCTTAGAAATCTGAACTTTATGACTTTTCCTGGTACAAGTTTTGTTTCCAATATGTTAGAGTCCTCAAGATTGGTCCAAGTGGTATTTTTTACTTCACTACATGTGTAACTGATTCCAGATATCCTGCTGATTTTACAGGAAGAGCATGCCAATATCAGGGATATGAAAGGGAAAAAACAACCACTAGAGTGGAGTGATTACAAGTCCATGCCATTTACTCAATGTGTAAGTTGGAAAGCCCTTGTTTTCTTAAAAATTAGCTACTCCTAAAAATATCATGCCAACAGCACGAATCCATCTAGTGTAAATGGCATCTCTTAACTGAACCTTTGAAACGGTACAGTTGGTTTACTCACATCATGATTAAATGAAGGGTTTACATTTCTGCAGGTGATAAATGAGACACTCCGTGTGGGTAACATTATTAGTGGAGTATTCAGGCGAGCAAACACTGATATTCATTATAAAGGTATTTCAATATAAACTATACTAAGTCCACGTACATTTTATTCATTATCTAAAAGAAGTCCCCATACATTTTTCATCAGAAATGCTCATTATGTATGGCATTTTTCTTTGTTTCTTAGATTACACAATTCCAAAGGGATGCAAGATTTTTGCTTCATTCCGAGCTGTGCACCTTAATAATGAACACTACGAGAATGCTCGGACATTTAACCCTTGGAGATGGCAGGTACTCCTAGGGGCTCTGTGTTATTGCTATTGGGTCTACTTATTCAATTATGTCCTGTGCTACAAAAGTAAAATGCACGCTGAAGCTATCTGCAACAAATTTGTTCCTGTGCAGATCAACAATAAACTTCAGAATGCGGTAGGGGCCAATATATTTACTCCATTTGGTGGTGGACCCCGGTTGTGTCCTGGCTATGAGCTTGCCCGGGTTGTCGTTTCTATCTTCCTCCATCATCTTGTAACGCGCTTTAGGTAAGCCACCTTAATCTCTCAAATTCAATCGCTATCTTGCTAGCCAGAAAGGTGTAGATACTCTGCAAATGGATTTTCCACATTGTGATCCAAATTGGGCACCAGTCTGATTCCATAACAACTTGACCAATGAATTTGCAGCTGGGAAGAAACCGAAGAAGATAGACTTGTCTTCTTCCCCACCACACGAACTCTCAAAGGATACCCTATCAATCTTCGTCTGCTTTCAGAATCAATTTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034516