BGIOSGA034540

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Revision as of 08:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034540| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034540, complete gene.| tag = OsI_350...")
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Gene Name

BGIOSGA034540

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034540, complete gene.

LocusTag

OsI_35016

Ensembl Transcript ID

BGIOSGA034540-TA

Ensembl Protein ID

BGIOSGA034540-PA

Length

4555

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1421026..1425580

Sequence Coding Region

1424903..1425580,1424546..1424601),complement(1423411..1423534,1423216..1423326),complement(1422956..1423093
,1422772..1422840),complement(1422633..1422674,1422457..1422525),complement(1421658..1421729
,1421519..1421572),complement(1421299..1421440,1421026..1421066

Genome Context

<gbrowseImage1> name=IndicaChromosome11:1421026..1425580 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:1421026..1425580 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGGATTTGGACGCGCCGCTCGACGCGGAGAAGGGCGACGCGGCGCTGCGGCGGCTGCGCGACGCCGACCCGGCCCTCTACCTCTCCCCCTCCGCCGACCTCGCCGCCGCCGCCCGTGAGGCCTCCAAGCACCTCTACGCCTCGCTCGTCCCCTTCTCCCCCGCGCAGCCGCCCCCGCTCTCCAACCTCCTCGCAGGCCCCGCCTTCGACGCCGAGCAGATTTGGTCCCAGATTGAGCTGCTCTCCCGCCCTCTCATCCCCCACCTGCGCCGCCAGCTCCGCCGCCTCGAGCAGCAACCCCCGTCTCAGCCGCCGCCTCGTACGGAATCGAAGTCCGCTGATGCCGAAGAGAAGTCACAGGAGGAGGAGGATGGTGAAGGTGACGAAGAATTGGAGGAGTTGGACGATGTAGATGATGAAGAGGAATCAGAGGAGAAGGAAAAGGAAGAATTAGGATTGGAGGGTGAAGCAGGGAATGAAGTGGAGGACGAGTTCTTCAAAATAAAGGATCTCGATAACTTCATGGTAAAGGGGGAGGAGGCGGAATATGGTGGGGGTGCCAAGCAAGGGAAGAAGAAGAAGAAAACAGAGAACTGGATGGAAGAAGATAGTGATTCGGAGGACGAGGAGTATCTTGATGAGGATGAAGAAGATGACGATGAGCACTTGGATTTGGAAGACTTCGACGATGAAGAAGAAGAAGAAGAGGGTGCAGTTGGAGATATAATGTATAAGGATTTTTTTGAGGAAGCGGATGACCAAAAAGTAAGGAAGAAAGGTGGCTCCAAGAAAGTTCAATTCAAGGATGAACCAGATAAACCAGAAGTTGATGACAAAAATGATGATGGAAATGATGAACAGGGTTTGTCAACTCACGAGAAGGCGCGCCTGAAGATGCATGCTAAAATAGAGGAAATGGAGAAAGCTAATCTTGAACCTAGTACGTGGACCATGCAGGGAGAGGTTAATGCTTCCAGCAGACCCAAAAATAGTGCTCTAGAAGTGGACCTTGATTTTGAGCACAATGTAAGACCTGCCCCAGTAATCACTGAGGAAGTCACTGCTTCTCTTGAAGAGATGATAAAGAAAAGAATAATAGAGGGTCATTTTGACGATGTTGAAAAGCCTTCTCCCTTGCAATTTAAATCCCCAAAGGAACAAAAGGATCTGGATGAAAGTAAGAGCAAGAAGGGTCTTGCTGAACTATATGAGGACGATTATGCGCAAAAAGCTGGCCTTGCACCTGCACCACTTTCTATTTCAGATGAACTTAAGAACGAGGCAAAGACCTTATTTAAGAGAATATGCTTGAAGTTGGATGCACTATCTCATTTCCACTTTGCTCCAAAGCCGGTCATTGAAGATATGTCTATACAAGCAAATGTACCAGCTCTAGCAATGGAGGAGATTGCACCTGTAGCTGTTTCAGAAGCTGCAATGCTTGCTCCTGAAGAAATTTTTGAAGGAAAAGGTGATGTTAAAGAAGAAGCAGAACTTACACAAGCTGAGCGCAAAAGAAGAAGAGCTAACAAGAAAAGGAGATATGCAGGATCGCATAAGGAGAGGCCAGCCAAGATGCAGAAAGATTAA</cdnaseq>

Protein Sequence

<aaseq>MAMDLDAPLDAEKGDAALRRLRDADPALYLSPSADLAAAAREASKHLYASLVPFSPAQPPPLSNLLAGPAFDAEQIWSQIELLSRPLIPHLRRQLRRLEQQPPSQPPPRTESKSADAEEKSQEEEDGEGDEELEELDDVDDEEESEEKEKEELGLEGEAGNEVEDEFFKIKDLDNFMVKGEEAEYGGGAKQGKKKKKTENWMEEDSDSEDEEYLDEDEEDDDEHLDLEDFDDEEEEEEGAVGDIMYKDFFEEADDQKVRKKGGSKKVQFKDEPDKPEVDDKNDDGNDEQGLSTHEKARLKMHAKIEEMEKANLEPSTWTMQGEVNASSRPKNSALEVDLDFEHNVRPAPVITEEVTASLEEMIKKRIIEGHFDDVEKPSPLQFKSPKEQKDLDESKSKKGLAELYEDDYAQKAGLAPAPLSISDELKNEAKTLFKRICLKLDALSHFHFAPKPVIEDMSIQANVPALAMEEIAPVAVSEAAMLAPEEIFEGKGDVKEEAELTQAERKRRRANKKRRYAGSHKERPAKMQKD</aaseq>

Gene Sequence

<dnaseqindica>1..678#980..1035#2047..2170#2255..2365#2488..2625#2741..2809#2907..2948#3056..3124#3852..3923#4009..4062#4141..4282#4515..4555#ATGGCGATGGATTTGGACGCGCCGCTCGACGCGGAGAAGGGCGACGCGGCGCTGCGGCGGCTGCGCGACGCCGACCCGGCCCTCTACCTCTCCCCCTCCGCCGACCTCGCCGCCGCCGCCCGTGAGGCCTCCAAGCACCTCTACGCCTCGCTCGTCCCCTTCTCCCCCGCGCAGCCGCCCCCGCTCTCCAACCTCCTCGCAGGCCCCGCCTTCGACGCCGAGCAGATTTGGTCCCAGATTGAGCTGCTCTCCCGCCCTCTCATCCCCCACCTGCGCCGCCAGCTCCGCCGCCTCGAGCAGCAACCCCCGTCTCAGCCGCCGCCTCGTACGGAATCGAAGTCCGCTGATGCCGAAGAGAAGTCACAGGAGGAGGAGGATGGTGAAGGTGACGAAGAATTGGAGGAGTTGGACGATGTAGATGATGAAGAGGAATCAGAGGAGAAGGAAAAGGAAGAATTAGGATTGGAGGGTGAAGCAGGGAATGAAGTGGAGGACGAGTTCTTCAAAATAAAGGATCTCGATAACTTCATGGTAAAGGGGGAGGAGGCGGAATATGGTGGGGGTGCCAAGCAAGGGAAGAAGAAGAAGAAAACAGAGAACTGGATGGAAGAAGATAGTGATTCGGAGGACGAGGAGTATCTTGATGAGGATGAAGAAGATGACGATGAGCACTTGGATGTAAGCATTTCGTAATCACATCTCTTGTTAAATTCTGAGACCAGTATTAGCTATCGTAAAGAAGATTGATATATAGAACCACTGATCTAGTAGTATTTCAGGAGTAGACACCAGAATTTCTGTAGTCGCAAAAGAGAAAGTATTTGCATTACCTCAGGAAATTGAGCATATGGAGTAAGTTCTAAAACAGTTTCCTGCTTGAGCTAATAGGCTTATATTGGGAGCTAGCATTGGGTATGGTTTAATGCCAAGATGCATGCTTGCTAAATGTGATTCTTAAGTATCGTATTTTGTAATGTAGTTGGAAGACTTCGACGATGAAGAAGAAGAAGAAGAGGGTGCAGTTGGAGATATAATGTAAGCCTTTATGCTATTTTCTGAAAATGCTCATATCATGATTGACAGAATCACAGAATGCTTTCGCACACTATTTTTATCTTTAAGTGATTAAATACTGGGATATCAGATGGTTTTAACTACATTTTAATTGCTTTTGTGAAGATCGGTATGATATTCGTAGAAATGGAAATGGTTGTCATTTATAAATTTGAATTGTAGAATCACTTGAATAATTCTTCACAACCTTTTCCTATTTTATCATTTTCATGCTCGGCACATAATTTGACCTGTTTAAGTTAATTGTCAAACTTACTTATTAGATGATGGCTAGCTTTTCATGAGACCAACAGCTCAGAAAAGGGCATACGGAGGCAAATGGAGTAGGAAAACAATTGGCTCCAAATAATGGCATGGAGTGGACTCAATTAAATTAGCAAACATTAAGTATGTAAGACAAACATATTACATTTTCACGTAAATTGTTAAAAAAATGATGATAGCACAAGAAATTGGATTTATGAATAACAATTAGATTAGGCATAAGTCAAAGAAGAAGTCTGTTGAATATTAAAATATAGGTATAACCACATGTGTGGCCATGTGGGAATAGAATGCTGTGAAAAAAAACTGCCATGTTCACATAACTCATAGAATAATAGCAAAGGATACCTACAAGTTTATATGTCATGTACAAAAAGGTTAAGACACACAATATCACCCTAAAAACACAGCTTTTTAGCATATATATAACCTAGGCAAAACTGAGCCAAGTTCTGTCTACTTCTTAGCCACTGCAAATGCCCCTGGAAGGATAAGTGATCTGATTAGACAATTCCAAGATCTCACCATGCACATAAATGCATTACATCATTCTTTCCTGCCTTGTATTTGTCCAGTGGAGCCTTTACAGAAGTTTCCATATGTTGTATTGACTCAGCAAAGCTTAATCGTTATGCCCAGACTTCGGTTGTATTTAATATTTGTGCATTTATAGTATTATGCTTTGACCAGGAAAGATGATTTTTCCAGGTATAAGGATTTTTTTGAGGAAGCGGATGACCAAAAAGTAAGGAAGAAAGGTGGCTCCAAGAAAGTTCAATTCAAGGATGAACCAGATAAACCAGAAGTTGATGACAAAAATGATGATGGAAATGTTAGTCAAGTACTAGACTTAATTACTTCAATATAAACAAGTGAGGCACATGTATATTATCAACATATTCTTCCAATTCTGCAGGATGAACAGGGTTTGTCAACTCACGAGAAGGCGCGCCTGAAGATGCATGCTAAAATAGAGGAAATGGAGAAAGCTAATCTTGAACCTAGTACGTGGACCATGCAGGGAGAGGTAATATATAATATGTTTATCCATTCATTAGTTTCTAGAACAAAACAAAGTTTTAACTTTGAACTGTTCTGCTATTAAATCATCAGTTCATGGTAAAGAAACCACTTGAAATTTTCTTGTAGGTTAATGCTTCCAGCAGACCCAAAAATAGTGCTCTAGAAGTGGACCTTGATTTTGAGCACAATGTAAGACCTGCCCCAGTAATCACTGAGGAAGTCACTGCTTCTCTTGAAGAGATGATAAAGAAAAGAATAATAGAGGTATGTGTGTTGTTTCCTTTTTCGACATGGCATAATGGGCAGTTTTGCAACTTGGTTAACTTTGTGGCCTTGTGCTACTTATACTGAGGGAGCTTTACTTGTTGATTCCCTGTAGGGTCATTTTGACGATGTTGAAAAGCCTTCTCCCTTGCAATTTAAATCCCCAAAGGAACAAAAGGATCTGGTATACTTTTAATCTTGTCCAATAACATAACTCATTGATGATAACAATAACTAATCATGTATTTGTTGTCTTACTGTTATCAATATTATTTCAACAGGATGAAAGTAAGAGCAAGAAGGGTCTTGCTGAACTATATGAGGTTTGCACTATCAGAATACAGCTTTTATTTTTTTATATTCAAAGAAGTTGCTACTTAAGATCAGTTTAATGATGATTTATTGAGGGCTGGTGTTTGTGTTTGTACAGGACGATTATGCGCAAAAAGCTGGCCTTGCACCTGCACCACTTTCTATTTCAGATGAACTTAAGAACGAGGTGAGTTTAATCACTTTCTATTATAATATGACTATTGGCTTTCATGGGACTAAGGCTGTACAGTTTCTATTGTTAAGGACATTTTTTTTCTTTTGTTTAATTGCTGTGTGATTGCATGTCATTTGTTTTTTAGTTAAAAGCAAGCTGCAAAAACAAGAAATCCTACATGTCAAAGAGGAAATCTTGAGTTCTTCTCATTGAATACATGTCATTCTATTATGACCTTCCCCCACCCCACACACACACACACACGCAAAAAAAAAAAAAAAAAAATCTTGTATCAATGCATGTCTTGATTGCTAGTGTTGCTACTTTATTCAATATTTTCCTCTCTGTGTGGTGATGGTGGCAAAGATACTTGCAATGTCTTTGAGAAAGATCTTTTGAAAGGAATTGATAATGCTGTACCTCATGGTCATGCAATTGATTAAAGTTTGTTTTTTTTATGGTAGAAGCAGACATCATTTTCTTTTGAAAAATAGATAAGTGATTACTTGTGATCACAATGTTGTTAACTTAGTACTAACTATGTAGCAATAAGCATGCAAATGGGTCATAGCGTCATACTCAGAGATTTTTAAAACTGTAATTTTTTGAGGTACCATTATCAACTTGGTGGTCTTTATAAATTTGTTCCCACCATTTCATTGGTGCTTTATGCATATTTTTTTCCCCTGTGATGATATTAGAGGCTTGCTGCATTGACCTAACTTCTGTTTCCACTTAGGCAAAGACCTTATTTAAGAGAATATGCTTGAAGTTGGATGCACTATCTCATTTCCACTTTGCTCCAAAGCCGGTATGGAATAGTGACCAGATATTTTACTTAAATTTGTAATTTCTTTCAGCGAAGTTAACTAACAAGGTAAATATTCACTTTTCAGGTCATTGAAGATATGTCTATACAAGCAAATGTACCAGCTCTAGCAATGGAGGAGGTAAATAAAATCCTTCATTTCTCCATGATGTTTATACGGTTGAGCATTTCATGTCATGATTTCTCTCTCTTTTTGCAGATTGCACCTGTAGCTGTTTCAGAAGCTGCAATGCTTGCTCCTGAAGAAATTTTTGAAGGAAAAGGTGATGTTAAAGAAGAAGCAGAACTTACACAAGCTGAGCGCAAAAGAAGAAGAGCTAACAAGAAAAGGAGATATGCAGGTAAATTCCCTTATGTTTTTTAAGATGCATTCCTTCTAGCTTTTAGTATAAATCTTCTGACCTGACATGGATAATGCTCCTACTTCCTCATTCGAAACATTTCGTTGTTCATTCAAACATGGAAGTAGTTTGAGCAACACAAATTCGATTAGCTAGCAATATTTCCAATTGCAAAGTTGGGTACGATAGTAGAATGAGGCCTGCTCGTTTTTCCTACTTTTGTACCATACAGGATCGCATAAGGAGAGGCCAGCCAAGATGCAGAAAGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034540

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA034540&oldid=36516"