Os11g0205500

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Revision as of 09:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0205500| Description = Conserved hypothetical protein| Version = NM_001073986.1 GI:115484620 GeneID:4350023| Length = 2892 bp| Definition ...")
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Gene Name

Os11g0205500

Description

Conserved hypothetical protein

Version

NM_001073986.1 GI:115484620 GeneID:4350023

Length

2892 bp

Definition

Oryza sativa Japonica Group Os11g0205500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5307694..5310585

Sequence Coding Region

5307963..5308213,5308339..5308588,5308689..5310539

Expression

GEO Profiles:Os11g0205500

Genome Context

<gbrowseImage1> name=NC_008404:5307694..5310585 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:5307694..5310585 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagcggcgaaaaattcacaaatcgacagcaagccgggggctcagatccggcgtgcaatccccaaaaaatccagggaagagagcagcgagtcggagcggcgcctcctcctccgatggcccccgcttcggcagattcacctgttaccacggggaggaggagaagcgatggcaccctccggccaacgaaatcctccggtccatacagaagctgtacgacgaggcggcgcggcggctgcccttggacgagatcccggagctcgtcgactgcctcggcgaggtcggacactgcttcggcctcgccgaccccgtcagcaacatcatcctcaacgccatcgcccacctctccggatcaccgcccctccaactccaagaccacccaccgccgctcccccggaagaggacccgcaggagctacagcgagtggtgggggttcatctcatccacctctctcaacggcctcatcgccttcatgaaggtctatttccgctacctcaccggcgaccaggccaggcgctacctctacctcgcctcctacgacctcctcctcgccatcaagttggtccaccatgaccgccatctcccactcccgccatcccccctcctccccgacggtggcaagatgaagaacgccctccggatcgccgcgctcaaagcaggccaccccgcgcccgacgacctggcgcgcaccatgaccgcgcagtacccctctcatctactctcccctatcgtccacaagcttcaggggtcggacctgctcaccacccatgacgtccagtccatcaaggacctgctcctcaacgcattccaatggcccccgcccaacatggacttcttgtgctgcccaaatggtgagtcttgtgctcaagccgcccccgaccgttttgctggaatctcaccaaatcatgttcaatttcagaaactcctatacatctcggatcttacgatagatagcgcagccatagagacaaagctatcaaaatgcgtagcgaaagtgcttggtggttgtgaagaacatggacatgtgaactatgatgcctccccgccatgtgagcacatattgtccctgaacatgtgcctcctcgacaccatccattgcttctacatcagggcacttgccgtgctgcccctgcccgtatcagatgactccatgcgccgcggacgcctcctccgcgcaatcctcatgtctggacaatgcttcggccccttggatcccgtatcaaacatcatcatcaacaccctctggtacgacgccgcataccctcccctgtatccaaaggatggcggtggcggcgattgtgaggttgagttgccgcaggatatctctgacacccaagccatgtctcgcattgcatcccgttccctcaacggccttgtcgccctactccgtgccatcaccaccaccaccactggctgctcgctctccaagcatgaggccgtggagtacctttggtccaggcagtgtgacctcactgacaagctacagcagacggtgatgacgaacaagaacccctactctgctgcagccaaggcttcagagcacccgcagcacaccatgcttgggtcattcctcatgtccctctgcggcgagaagcttgatcgcctgcagcacttgctgagatccattagtgatggctccggctgtgtaatctccaacgctgattgggagcagcttaacgcaatgatccaagagcagctaaccacgatgattggcagaaaaagactgcctccatttgatacacaagctttagcagcattatcgaggagaaggtcagactatgtgaaccggcaaaggtttgttcgcagcaagctggaagaattgctagtcacatactccagacagcatccttgggaaccaagatataagcttgacctcatatgtggagtggaggaacctcaatcccactactggagatgctaccatgctaacttcttggcaagcacccatggcactgtgctcaaactaaatcgtgaggcaaccacaacaccaaaccctaagcgcacactcttctttgctcaattctgggactcacaacctggtcgatttaatgaatcaaactcgaagcccatctgctgccctgttcaagatagcacatgttttggtctttgcaccacttgtgagggcaatgcaagtacaattttgcacccaccatctggatatctttttgaggatgatgttgatgacgccattgaagtttatgatgttaatgctgctattgatgtgtttggttctgcttcgtgcagtcttagtaaagataaagataaaggcctgctagagtcagatttcatatattttgatcatggaaggaatgcaaatcttacaaagattctgaatgacgactctattttatga</cdnaseq>

Protein Sequence

<aaseq>MKRRKIHKSTASRGLRSGVQSPKNPGKRAASRSGASSSDGPRFG RFTCYHGEEEKRWHPPANEILRSIQKLYDEAARRLPLDEIPELVDCLGEVGHCFGLAD PVSNIILNAIAHLSGSPPLQLQDHPPPLPRKRTRRSYSEWWGFISSTSLNGLIAFMKV YFRYLTGDQARRYLYLASYDLLLAIKLVHHDRHLPLPPSPLLPDGGKMKNALRIAALK AGHPAPDDLARTMTAQYPSHLLSPIVHKLQGSDLLTTHDVQSIKDLLLNAFQWPPPNM DFLCCPNGESCAQAAPDRFAGISPNHVQFQKLLYISDLTIDSAAIETKLSKCVAKVLG GCEEHGHVNYDASPPCEHILSLNMCLLDTIHCFYIRALAVLPLPVSDDSMRRGRLLRA ILMSGQCFGPLDPVSNIIINTLWYDAAYPPLYPKDGGGGDCEVELPQDISDTQAMSRI ASRSLNGLVALLRAITTTTTGCSLSKHEAVEYLWSRQCDLTDKLQQTVMTNKNPYSAA AKASEHPQHTMLGSFLMSLCGEKLDRLQHLLRSISDGSGCVISNADWEQLNAMIQEQL TTMIGRKRLPPFDTQALAALSRRRSDYVNRQRFVRSKLEELLVTYSRQHPWEPRYKLD LICGVEEPQSHYWRCYHANFLASTHGTVLKLNREATTTPNPKRTLFFAQFWDSQPGRF NESNSKPICCPVQDSTCFGLCTTCEGNASTILHPPSGYLFEDDVDDAIEVYDVNAAID VFGSASCSLSKDKDKGLLESDFIYFDHGRNANLTKILNDDSIL</aaseq>

Gene Sequence

<dnaseqindica>2373..2623#1998..2247#47..1897#gcggctagcgttgtttgtggcggcggtaggcgtagcagtaggagatatgaagcggcgaaaaattcacaaatcgacagcaagccgggggctcagatccggcgtgcaatccccaaaaaatccagggaagagagcagcgagtcggagcggcgcctcctcctccgatggcccccgcttcggcagattcacctgttaccacggggaggaggagaagcgatggcaccctccggccaacgaaatcctccggtccatacagaagctgtacgacgaggcggcgcggcggctgcccttggacgagatcccggagctcgtcgactgcctcggcgaggtcggacactgcttcggcctcgccgaccccgtcagcaacatcatcctcaacgccatcgcccacctctccggatcaccgcccctccaactccaagaccacccaccgccgctcccccggaagaggacccgcaggagctacagcgagtggtgggggttcatctcatccacctctctcaacggcctcatcgccttcatgaaggtctatttccgctacctcaccggcgaccaggccaggcgctacctctacctcgcctcctacgacctcctcctcgccatcaagttggtccaccatgaccgccatctcccactcccgccatcccccctcctccccgacggtggcaagatgaagaacgccctccggatcgccgcgctcaaagcaggccaccccgcgcccgacgacctggcgcgcaccatgaccgcgcagtacccctctcatctactctcccctatcgtccacaagcttcaggggtcggacctgctcaccacccatgacgtccagtccatcaaggacctgctcctcaacgcattccaatggcccccgcccaacatggacttcttgtgctgcccaaatggtgagtcttgtgctcaagccgcccccgaccgttttgctggaatctcaccaaatcatgttcaatttcagaaactcctatacatctcggatcttacgatagatagcgcagccatagagacaaagctatcaaaatgcgtagcgaaagtgcttggtggttgtgaagaacatggacatgtgaactatgatgcctccccgccatgtgagcacatattgtccctgaacatgtgcctcctcgacaccatccattgcttctacatcagggcacttgccgtgctgcccctgcccgtatcagatgactccatgcgccgcggacgcctcctccgcgcaatcctcatgtctggacaatgcttcggccccttggatcccgtatcaaacatcatcatcaacaccctctggtacgacgccgcataccctcccctgtatccaaaggatggcggtggcggcgattgtgaggttgagttgccgcaggatatctctgacacccaagccatgtctcgcattgcatcccgttccctcaacggccttgtcgccctactccgtgccatcaccaccaccaccactggctgctcgctctccaagcatgaggccgtggagtacctttggtccaggcagtgtgacctcactgacaagctacagcagacggtgatgacgaacaagaacccctactctgctgcagccaaggcttcagagcacccgcagcacaccatgcttgggtcattcctcatgtccctctgcggcgagaagcttgatcgcctgcagcacttgctgagatccattagtgatggctccggctgtgtaatctccaacgctgattgggagcagcttaacgcaatgatccaagagcagctaaccacgatgattggcagaaaaagactgcctccatttgatacacaagctttagcagcattatcgaggagaaggtcagactatgtgaaccggcaaaggtttgttcgcagcaagctggaagaattgctagtcacatactccagacagcatccttgggtaaatttagagtataaacgtttttttatttttgtttgattgctgcatttgctttcttccagtgtgctaagacttcgtctacccttgtttgttattgcaggaaccaagatataagcttgacctcatatgtggagtggaggaacctcaatcccactactggagatgctaccatgctaacttcttggcaagcacccatggcactgtgctcaaactaaatcgtgaggcaaccacaacaccaaaccctaagcgcacactcttctttgctcaattctgggactcacaacctggtcgatttaatgaatcaaactcgaagcccatctgctgccctgttcaagatagcacatgttttggtgagtcactgaactctaagttgtggtgctcctaatttatttttcgtcaagtagtacacaaattgtagcaaccattattgccattggcatgtatgttgatgtctttgttttggctttatgaacaggtctttgcaccacttgtgagggcaatgcaagtacaattttgcacccaccatctggatatctttttgaggatgatgttgatgacgccattgaagtttatgatgttaatgctgctattgatgtgtttggttctgcttcgtgcagtcttagtaaagataaagataaaggcctgctagagtcagatttcatatattttgatcatggaaggaatgcaaatcttacaaagattctgaatgacgactctattttatgatgaagacaatggtgatgatatagctctgctgttagatttggaggggatttattgacatatattgaggtgtggaattatttatcctcgaacccctccaatccctctgaacaaggcttaatatggatgaggaggggatcattattcaggttacaagtttgtctagtcattgtaataacagaagaatctatatttgcttttggacaatgagtcgcaacactgtatatttgtatatttgctgtaactagcaatggggccgtgctttactacgg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0205500, RefSeq:Os11g0205500