Os11g0205900

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Revision as of 09:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0205900| Description = Cyclin-like F-box domain containing protein| Version = NM_001189491.1 GI:297728112 GeneID:9271146| Length = 2689 bp|...")
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Gene Name

Os11g0205900

Description

Cyclin-like F-box domain containing protein

Version

NM_001189491.1 GI:297728112 GeneID:9271146

Length

2689 bp

Definition

Oryza sativa Japonica Group Os11g0205900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5325852..5328540

Sequence Coding Region

5325852..5326051,5326718..5326795,5327137..5327290,5327381..5327447,5327469..5327542
,5327656..5328540

Expression

GEO Profiles:Os11g0205900

Genome Context

<gbrowseImage1> name=NC_008404:5325852..5328540 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:5325852..5328540 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctccgcggaagaaggccaaggaatcgcccggctcgaccggcggcgaccggataggggacctcccggacgaggtgctccaccacgtgctctccttcctaccggcgcaggaggccgtccggacgtgcctgctagcccggcgatggcgccacctctggaagtccgccacgggggtgcgcattggcgagggcgagactgatccgggaagcgtgaaggaccaccaggagtttcttgaccatctgttggtactccgtgatagtgtgcctatggaaacctgcgtgctaaggtttagtgagcacagcaaagagctcatcgaggacgcagcccggctgaatttttggttcaagcatgctctgcttcgcaaagttcggttcctccagcttgaaaactgggagttttatgacccggttccgatagatgagctgcctcttgtctcccggcacttgacaaggctacagctttacggtataagtctaaatgatagcttccttaacttctcgagctgtccagcgttggagcatctattgtttgagttttgtttcttcgagtgtgccaagatctcatctaactcggtgaaacgtctgagcatcacttgctgtagtttcaatgcgaccttgcgagtacgtgtagatgtcccaagtcttgtttctctgcggcttgatgagtttgacaaccgggctccagtgcttgagaggatgccatcattagttgacgcatttgtgagaatcttcttctatactaaagacttttgtagtgaatctaactctggggattgtagtcatgagggctgtgaatcttgttatggtatcaaggacaacaaatgtgtgcttctggaaggtttatcgaacgctaagacgttggttctgataaataaacaaaaatcatttattttcagaagggatttgaaatggtgcccaacatttacgaagttaaagactttgttactcaatgaatattgtgcactagcttgcattcttgaacattcaccggttctggagaatctcattcttcagatatattctgagggacctgaacatataatgaaaatcaacggaaactgctcttcagtggatagatcagctgcaatatcagcacaccttgagatagttgaaatcagatgtgaaatgattgataactttgtagacgaagttttgaagtatctgtctacatttaacatactttatgttgatgttgccatcttgaattccagtttattacttgctcttattgctcccatgtcatttgccatgtggacaattttcaattttgaggaaatcgggatttttgatgatgacgaagacgaagacgaagatagagatggagatgatgatgaagactcttacgaagacgatgatgataaagatgaagatgaagactcttacgaagacgatgatgatgaagatgaagacgaagactcttacgaagagggaaatgaggatgacaatgaagatgcttga</cdnaseq>

Protein Sequence

<aaseq>MSPRKKAKESPGSTGGDRIGDLPDEVLHHVLSFLPAQEAVRTCL LARRWRHLWKSATGVRIGEGETDPGSVKDHQEFLDHLLVLRDSVPMETCVLRFSEHSK ELIEDAARLNFWFKHALLRKVRFLQLENWEFYDPVPIDELPLVSRHLTRLQLYGISLN DSFLNFSSCPALEHLLFEFCFFECAKISSNSVKRLSITCCSFNATLRVRVDVPSLVSL RLDEFDNRAPVLERMPSLVDAFVRIFFYTKDFCSESNSGDCSHEGCESCYGIKDNKCV LLEGLSNAKTLVLINKQKSFIFRRDLKWCPTFTKLKTLLLNEYCALACILEHSPVLEN LILQIYSEGPEHIMKINGNCSSVDRSAAISAHLEIVEIRCEMIDNFVDEVLKYLSTFN ILYVDVAILNSSLLLALIAPMSFAMWTIFNFEEIGIFDDDEDEDEDRDGDDDEDSYED DDDKDEDEDSYEDDDDEDEDEDSYEEGNEDDNEDA</aaseq>

Gene Sequence

<dnaseqindica>2490..2689#1746..1823#1251..1404#1094..1160#999..1072#1..885#atgtctccgcggaagaaggccaaggaatcgcccggctcgaccggcggcgaccggataggggacctcccggacgaggtgctccaccacgtgctctccttcctaccggcgcaggaggccgtccggacgtgcctgctagcccggcgatggcgccacctctggaagtccgccacgggggtgcgcattggcgagggcgagactgatccgggaagcgtgaaggaccaccaggagtttcttgaccatctgttggtactccgtgatagtgtgcctatggaaacctgcgtgctaaggtttagtgagcacagcaaagagctcatcgaggacgcagcccggctgaatttttggttcaagcatgctctgcttcgcaaagttcggttcctccagcttgaaaactgggagttttatgacccggttccgatagatgagctgcctcttgtctcccggcacttgacaaggctacagctttacggtataagtctaaatgatagcttccttaacttctcgagctgtccagcgttggagcatctattgtttgagttttgtttcttcgagtgtgccaagatctcatctaactcggtgaaacgtctgagcatcacttgctgtagtttcaatgcgaccttgcgagtacgtgtagatgtcccaagtcttgtttctctgcggcttgatgagtttgacaaccgggctccagtgcttgagaggatgccatcattagttgacgcatttgtgagaatcttcttctatactaaagacttttgtagtgaatctaactctggggattgtagtcatgagggctgtgaatcttgttatggtatcaaggacaacaaatgtgtgcttctggaaggtttatcgaacgctaagacgttggttctgataaataaacaaaaatcagtacgcttgcacttccatctttagttcgtttatattatatcatttctataaccgtgcttatatccactcaaactgtgaggatttgtttatcttcttatttgtattctgtacagtttattttcagaagggatttgaaatggtgcccaacatttacgaagttaaagactttgttactcaatgaatattggtgtgtgcctgatgattatagtgcactagcttgcattcttgaacattcaccggttctggagaatctcattcttcagatatattctgaggtataccttctctaatttgacatataattcgttgttgaaggttttaaacatttttctattgttcttattaaatgttttaatttctgacagggacctgaacatataatgaaaatcaacggaaactgctcttcagtggatagatcagctgcaatatcagcacaccttgagatagttgaaatcagatgtgaaatgattgataactttgtagacgaagttttgaagtatctgtctacatttaacatacgtaaagaacatacttcatttttttctatatttcagagattttccttcttcatatgcgtgaaacatagcaagcagtattgaaactcttaagttcactggaaatggctaggaacagggattgattcagaaattaaagcatgcactgcatttggtctgattgggaagaaattacctagtataactcttttggctggtagtatccaaagaagaaaaaccatacaaagatttcttaaaacttccttgcatcacacaaccagcatgataatttttatgtaatatggctgtaattatatctttcaatcatttgattttattttctttcccatcagttgcatattgcagtttatgttgatgttgccatcttgaattccagtttattacttgctcttattgctcccatgtcatttgccatgtggacaagtacctcacagactgcttatcacgttgtcaaactactaatgtgagagaatactgttcttctgaagtctcagcttaacctaccatagggctgaatgcctgaatgtgctctttagctgtctgcactaaccatcctagtcacatcatagcaactagtgccaataactgcataagattgcttagttcttttgtttagctaagataatgtttttcggtgcctctagattatatttgttaggtgggggctctactcacggcacctggccattgaggcctgaagtccaagcatcttgtttaccagttattataagtacccttatagtccctagagcatgcatatttctctattgttgtgtgccaggctatagagaatccatcaactctgcagtataagctgcaaccaggaaataaagggtcaatacttccccaagttagggcattttattatgtttcttttctttgaatgaagtagtgggtataatcagaattttttatggagaagtaatgtggtatttgtagcaatttgtatttggaaagattgatctaatggactacctttgtcaactgattcaatgttttcgttttgaagtaactgaaacttctgtaagttaattttcagctgagacatcttgaaatttactgtgcttgtcgtatttgttatttctgcagttttcaattttgaggaaatcgggatttttgatgatgacgaagacgaagacgaagatagagatggagatgatgatgaagactcttacgaagacgatgatgataaagatgaagatgaagactcttacgaagacgatgatgatgaagatgaagacgaagactcttacgaagagggaaatgaggatgacaatgaagatgcttga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0205900, RefSeq:Os11g0205900