BGIOSGA034621

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Revision as of 08:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034621| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034621, complete gene.| tag = OS11G01...")
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Gene Name

BGIOSGA034621

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034621, complete gene.

LocusTag

OS11G0114700

Ensembl Transcript ID

BGIOSGA034621-TA

Ensembl Protein ID

BGIOSGA034621-PA

Length

6598

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:347440..354037

Sequence Coding Region

353822..354037,351815..351997),complement(351237..351329,350864..351046),complement(350665..350767
,350384..350569),complement(348771..349729,347802..348226),complement(347440..347497

Genome Context

<gbrowseImage1> name=IndicaChromosome11:347440..354037 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:347440..354037 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCGACAACCAGGGCTGCTCGCCGGCGCTCGAGCCCGTGCCCACGCCGCCCAACCCCGACCCCTCATCCATCTCGCCGGAGGCCTGGGATCCCCTCGAGGCCGCCGCCGGAGCCGTCGTCGCCCGGATCCAGCCCAACCCGCCCTCCGAGGACCGCCGCGCCGCCGTCATAGCCTACGTCCAGCACCTCCTCAGGTGCACCGTTGGCTGCCAGGTCTTTCCATTTGGATCTGTTCCGTTGAAAACTTATCTTCCTGATGGAGATATTGATTTGACTGCCTTTGGCCATTCAAGTGATGAAATTTTAGCAAAACAAGTACAGGCTGTTTTAGAATCAGAAGAGGCAAGGAAAGACGCTGAATTTGAAGTCAAGGATGTCCAATATATTCATGCAGAGGTCAAGTTGGTGAAATGCATTGTTCAAAACATCATTGTAGACATCTCATTCAATCAGTTTGGTGGACTGTGTACCCTTTGTTTTCTCGAGAAGGTTGATCAAAAATTTGAAAAATACCACCTTTTCAAGAGAAGTATAATGCTGATAAAAGCTTGGTGTTATTATGAAAGCCGCATTCTTGGTGCTCACCATGGATTAATTTCTACCTATGCATTGGAGATATTGGTGTTATATATTTTCCATCTCTTCCATGGAACATTGGATGGTCCACTAGCTGTTCTCTATAGGTTTCTGGACTACTATAGCAAATTTGACTGGGACAATAAGGGTATAAGCTTGTATGGCCCTATTTCCTTGTCTTCCCTGCCTGAGCTAGTTACTGACTCTCCAGACACTGTTAATGATGATTTTACTATGCGAGAGGACTTTCTCAAGGAATGTGCGCAGTGGTTTACTGTACTTCCTAGAAACTCTGAGAAAAATACTCAGGTCTTTCCCCGAAAATTTTTCAACATAGTGGATCCATTGAAGCAGAGTAACAATCTAGGGCGCAGTGTCAGCAAAGGTAACTTCCTCCGGATACGCAGTGCATTTGATTTTGGTGCCCGGAAGCTTGGGAAGATTATTCAAGTGCCTGACAATTTTACTATGGATGAAGTGAATCAATTCTTCAGGAACACATTGAAGAGACACTGCAGTAGGGTAAGGCCAGATGTGCAAGAAATAGCTCTGGACTTCAATGGTGAAAGAGCCGACAACGATAGTTCGCCTTTATACAGTAATAATTCCTTTGGTGATCTATCTGATGAGTTCAATAACATCAGCATTTCAGATTCCAGCAACCATGGGTCACTAAGGCAAAATGGATGGAATTATGTGGCTGAGAACAAGGAAAGGAAGTCTGTTTCTGGTGGCTTGCTGGCAAGCAAAGCAACAAATCCTGCAGCTACTAATTCAACTGGTATGACGAATGGCAGTGACTCTTGTGAGCCCGCATCACCATCAATTACCGGAGCACATAGCTTGCCATCTGAGGAAGGTCATGACGCACTGGATCTCTTTAATGAGTCAGAAAGTGGTACGAAAGCTGGCATAAAGTATGGCACAAACCCATCACACCATGGAATGTCAACAGTGAGTTATGCAGGCAGATCCCACCAGTCCTTTGAAGAGGTGGATAATGATGATAGAGGTACCATCGATAGCAATTGGTCAGATCTCACTGGAGACTACACAACAAATTTTAATAATCTTCTCTATGCTCAAGGGTTCCACCAAGATTATCCAATGAACCAATATTATCCATTTGGTCCAGTGTACTATCCAATACCCTCCCCTCCACCTGCACGATATCAGAATAGGCGATCATCAAATGGTCATAGCAGAAATAATGTGTATGGATATGCTGGTACAAATGGAATAGGCCCTGCTCCTTGTCCACCAGGTTATTTAATTATGAGGCCATATAGTCAAATTGATGATTCAAATCGAGCTCGTGGAACTGGCACATACTTCCCTAACCCAAACTTGTCCAAAGACAGATCACCTTCTGGACGAGGCGGAAGGGGAAAAACTCATTTCCTGCCACATAACCATCAAAGACCACACCACTACGGTAGAGCTGATATGTCAGCAGATTTGACTCCTTCGGAGGAATTGAGACATATTTATGATCCTGATGCAAATGACTTGGGAATCCCCTCTTCACTGCGCATATCAATACCTTCTCCATCTTCGGAAGCTCCAAGGGAAATTGTGCATGGCAATGGTTTTATTCAGCCTCCAGCTAAGAAACTTGAGTTTGGGACCTTGGGAGCATTGCCTTTGGAAGTTACATCCCAAGAGCTTGGTATTAACAGATTGAATACTGCTTCCGACAGCCAACCTTCAGCGTCTGCAAGCCCTATGTCTCTGGCAAATAATCCTGGAATTAGTTCTAATCAAATGAGGAATGCTCAGCCATATCATCTCAAGGACAACGGTGATTTCCCACCGCTATCTAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MVDNQGCSPALEPVPTPPNPDPSSISPEAWDPLEAAAGAVVARIQPNPPSEDRRAAVIAYVQHLLRCTVGCQVFPFGSVPLKTYLPDGDIDLTAFGHSSDEILAKQVQAVLESEEARKDAEFEVKDVQYIHAEVKLVKCIVQNIIVDISFNQFGGLCTLCFLEKVDQKFEKYHLFKRSIMLIKAWCYYESRILGAHHGLISTYALEILVLYIFHLFHGTLDGPLAVLYRFLDYYSKFDWDNKGISLYGPISLSSLPELVTDSPDTVNDDFTMREDFLKECAQWFTVLPRNSEKNTQVFPRKFFNIVDPLKQSNNLGRSVSKGNFLRIRSAFDFGARKLGKIIQVPDNFTMDEVNQFFRNTLKRHCSRVRPDVQEIALDFNGERADNDSSPLYSNNSFGDLSDEFNNISISDSSNHGSLRQNGWNYVAENKERKSVSGGLLASKATNPAATNSTGMTNGSDSCEPASPSITGAHSLPSEEGHDALDLFNESESGTKAGIKYGTNPSHHGMSTVSYAGRSHQSFEEVDNDDRGTIDSNWSDLTGDYTTNFNNLLYAQGFHQDYPMNQYYPFGPVYYPIPSPPPARYQNRRSSNGHSRNNVYGYAGTNGIGPAPCPPGYLIMRPYSQIDDSNRARGTGTYFPNPNLSKDRSPSGRGGRGKTHFLPHNHQRPHHYGRADMSADLTPSEELRHIYDPDANDLGIPSSLRISIPSPSSEAPREIVHGNGFIQPPAKKLEFGTLGALPLEVTSQELGINRLNTASDSQPSASASPMSLANNPGISSNQMRNAQPYHLKDNGDFPPLSS</aaseq>

Gene Sequence

<dnaseqindica>1..216#2041..2223#2709..2801#2992..3174#3271..3373#3469..3654#4309..5267#5812..6236#6541..6598#ATGGTCGACAACCAGGGCTGCTCGCCGGCGCTCGAGCCCGTGCCCACGCCGCCCAACCCCGACCCCTCATCCATCTCGCCGGAGGCCTGGGATCCCCTCGAGGCCGCCGCCGGAGCCGTCGTCGCCCGGATCCAGCCCAACCCGCCCTCCGAGGACCGCCGCGCCGCCGTCATAGCCTACGTCCAGCACCTCCTCAGGTGCACCGTTGGCTGCCAGGTTCATCTCTCACTTTCCTCACGCCTGCCTTTCTAGTATTCCGCAATAACTACTACTCTACCTTTCCTTTGTGCGTCAATGGCATGTCCACAACACCTAGTATGTGCTTACTACATGTGAATCTTATTCAGTCGTGTAATTATTCCCCTTCGATCATCTCTATGTACACAGCTGCTCTGGAGTGTTTAGGAGGATTCTTTTATTACTGTTTCACAAGTTATTTCCATTCTCTGTTTGGATATGGAAATGTAGTAAGGACAACATGCTACATACATTGTTGCCTCTGATTTGGCTAATTACCATACTCGGAGTTTCATATACCTACACTATGATGGCCCAAGTATGATTTTGCTAACACTAGCGATAGCGCCAAACTGATGTACAAGTTCATATAAATACAAATACTTCCCGCGGCCAGGGTCGCAGGTGTTAAATGTTTATTCCCTATGAATGTTTTGATATCCCTTGTCATAACTGGGCTTGATTTTCAGCAGCATAAATCTGATAATCTAATTATGCAAAACAATAATATATCGACACATGTTAATGTCCTGCATTTAACGACAGTTAACTTGCAGGTACTGGGTTGGAGAGTTGGGTATATGGTATATGCACTTTAGTGTCCTTTTTTATGACCTGGGTCTCCATAGCTTGCTCATCTTGTATGCTCCTTTTGGATAAGTGCCTCTTCTCTACTATATCTGTGCTCACAAGAAAATGGAATAGGGAAAAGTCTACTGTAACACCTCCAGACCGTGGCGGGAAACTGGCATAGTTTTTTTTTTTAGTTTAGTAAGGAGTACTTCCTTCCTGTTATATGGTTAGTTATTTTGGATCTTTGTTCATGTCAAACACAAGAGATCTGGTGACCATAGTGTATTTTAGGGGATTTGTAGAATATTCACTGAACAACTATAGACCATGTGCGAGGCACCCAATAAAAGGAAAATGTACCTGTATGCAATCTTGCATTAGCATCAAAGCATATGTTCCGATATCAATACTACTTTGCCAAGTATATGTTACTGTCTGGTGTGTGTCCACCATGTCTAGTATCAGCAAGCAAGTCATCCACATCGTTGCTCATACTTGTTGTTCACGGACCTGTTTAAGCTACACTATGTGCGGATGGAGCTAATATCAAACTGTTAATTATGGCAATAATAGACATCAAACGCGTACATGGTCTATTCTTTGATGTGCCAAACCATGCCTTTTCAACCTTTGTTTATACCTAATTACTAGAATTACTGTCGTGCACAGATGCACTTGGTAGATCACGAATTTTCAAGACAAAGGTGAATAATAAAAATAGAAAAGAAGTCAAACAAAAAAAATCAGAAAACAAGCAGTTTATTGCTTTATTTCAATCCAATTCTTAACTGGAACCCTTAGCCACTGTGAGGTGTACATCTGACAAATCAATACTGAAAACTGCATAGAAAATTGAGGTTTATTTATTTAATATCGTTCATGTAATATGTGATATGTTTACTACCTTGGCATCATGTTCTTTAGGAGCCAAACACATGTTCCAATGGTGCATAACATGCTCACTGCTAGTTGTTCTATGAGGAGTGCTCCTTAGTGCTCAACCCTAGGAATTGGCATGGCATTAGATAGGCAATATGGGATTCTCTGATTTTGTTGTGACTTATGTACAATACTTGAAAAAGAATTATTGCTTGCGCTTTTAGTCCTCTGCGAGCACTGGTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTTGAATCATCCGACATCGTGCTATTAAAAACTACAACTTTAACCTTTTTCTTTCTGTAAAGCACAGGTCTTTCCATTTGGATCTGTTCCGTTGAAAACTTATCTTCCTGATGGAGATATTGATTTGACTGCCTTTGGCCATTCAAGTGATGAAATTTTAGCAAAACAAGTACAGGCTGTTTTAGAATCAGAAGAGGCAAGGAAAGACGCTGAATTTGAAGTCAAGGATGTCCAATATATTCATGCAGAGGTTTTTCTCTTGATGCTCTTTGTTTTTTAGTTTATATATTAGTTAGTGTCTAATTCATATGCGTTTATGTTTCTGGTAGTGGTGTCTACTTATGTGTGCTTATCTATTGTGTTTATTATATAAGATCACATGAAACCATCCATGTGATTCATTAATACATGAATTCTTTTCTTTTTTCTTTTACTCCCCTTCTTATAGCTGCAATCAAACATTTCGCAGTATTCTTATCCTACTATAAAACGGGAAACAACAATAGAGAAATCCATCGTATTCACATGACATCAATGAAGCCTGTGCATATCTCAATATTTCACTGCTAGCAATAAAAATAAATAGTCAATAGTGATCAAGTAAACTTTCCACCACTGTGCTCTATTGTCATTTAACAACTAATGCATGCTTCAACATAGATTTACGTGTTCTCGCACATTGTTAATGTTTCTGATGGCATCATGTTTGTCTAAAATAAGTCTTTCTGATGGCAGGTCAAGTTGGTGAAATGCATTGTTCAAAACATCATTGTAGACATCTCATTCAATCAGTTTGGTGGACTGTGTACCCTTTGTTTTCTCGAGAAGGTAATGTTTGAAAAGTTGCAACAAATATGCAGTTGCCAGTTCTCTTCCTTAAACTGCAGATCTATCTCGGTCTAATTTATCACAAGCTAGGTCCGTTGTACTTCCTTGTGTGGTTCAACAGTTGGAAGATGATTTCTTTAAGGTCAGACTGCTCAGGGGAAAATATATCTATAACCATTACGTTTTGCAGGTTGATCAAAAATTTGAAAAATACCACCTTTTCAAGAGAAGTATAATGCTGATAAAAGCTTGGTGTTATTATGAAAGCCGCATTCTTGGTGCTCACCATGGATTAATTTCTACCTATGCATTGGAGATATTGGTGTTATATATTTTCCATCTCTTCCATGGAACATTGGATGGTCCACTAGCTGTAAGTTCTGACTTCCAACTATTCTGCAGCATTAGTAAAGTTCTTGTTTCTGACACCCTACATACGTTGCCATAAATTACTCTATGTTTTCTGCAGGTTCTCTATAGGTTTCTGGACTACTATAGCAAATTTGACTGGGACAATAAGGGTATAAGCTTGTATGGCCCTATTTCCTTGTCTTCCCTGCCTGAGCTAGTTAGTAAGTGGATGTGGTCTGATATGTTACCTCTTTTTTTTGTGATTGGAAGTTTTCTTTTTTTCATTGGTCATGCAAACTTTATTTTTTTTTCACAGCTGACTCTCCAGACACTGTTAATGATGATTTTACTATGCGAGAGGACTTTCTCAAGGAATGTGCGCAGTGGTTTACTGTACTTCCTAGAAACTCTGAGAAAAATACTCAGGTCTTTCCCCGAAAATTTTTCAACATAGTGGATCCATTGAAGCAGAGTAACAATCTAGGGCGCAGTGTCAGCAAAGGTTTGTTTCTTACATCTAGATCATGTGTTTTGATGGTAGGATTGGATGATTAGTCTTCGAAATATCACAACTTTAGTCAATTTTGGAAAAATTGATGTGTCAACTTGTTTGTTGTAACTTCACAGTTGTTTTCAAATTCATCTTCATCCCATGATTGGTCTCTCAGGGAAGAATGCTTGTTTACTTGTCAAATTTTAGTACTTATGCTCCAGATAGCTTAGTTTTTGGGCATTTACTGTGCATGCAAAAGGGATAAATTGTCGCTGCGCCCCCTAGTTCACAAGCTATTTATCCATGGGCCAAGAGATTTTAGAACAATTAAGCACAAAAGAAACTCTATGCCACTTAACTAAGCAGTAACACTTAGTACATTGGATATTTGCATGCCAGTGTATGCGACGTGCCCCTGGACCACCTTACTTTAATACCATACATGCTGCTTACTGACATGCTGTAAGTTAGTCATTCAATTGTTGTTTGTTACATGGGTATTTGCTCACATGCATAACTTCCTTTTGCTATACTGCACAATTGCTTATGTGCATTAAGCTGTTGCAGTGCTATTTGTTTTGTCCTCAACATTATTCAAGTCGCTATGGACATAGTATTTTGTCATTTAGTTTACCTGGCCTGATCCCGTTGTGCAAAGCACAGGTAACTTCCTCCGGATACGCAGTGCATTTGATTTTGGTGCCCGGAAGCTTGGGAAGATTATTCAAGTGCCTGACAATTTTACTATGGATGAAGTGAATCAATTCTTCAGGAACACATTGAAGAGACACTGCAGTAGGGTAAGGCCAGATGTGCAAGAAATAGCTCTGGACTTCAATGGTGAAAGAGCCGACAACGATAGTTCGCCTTTATACAGTAATAATTCCTTTGGTGATCTATCTGATGAGTTCAATAACATCAGCATTTCAGATTCCAGCAACCATGGGTCACTAAGGCAAAATGGATGGAATTATGTGGCTGAGAACAAGGAAAGGAAGTCTGTTTCTGGTGGCTTGCTGGCAAGCAAAGCAACAAATCCTGCAGCTACTAATTCAACTGGTATGACGAATGGCAGTGACTCTTGTGAGCCCGCATCACCATCAATTACCGGAGCACATAGCTTGCCATCTGAGGAAGGTCATGACGCACTGGATCTCTTTAATGAGTCAGAAAGTGGTACGAAAGCTGGCATAAAGTATGGCACAAACCCATCACACCATGGAATGTCAACAGTGAGTTATGCAGGCAGATCCCACCAGTCCTTTGAAGAGGTGGATAATGATGATAGAGGTACCATCGATAGCAATTGGTCAGATCTCACTGGAGACTACACAACAAATTTTAATAATCTTCTCTATGCTCAAGGGTTCCACCAAGATTATCCAATGAACCAATATTATCCATTTGGTCCAGTGTACTATCCAATACCCTCCCCTCCACCTGCACGATATCAGAATAGGCGATCATCAAATGGTCATAGCAGAAATAATGTGTATGGATATGCTGGTACAAATGGAATAGGCCCTGCTCCTTGTCCACCAGGTTATTTAATTATGAGGCCATATAGTCAAATTGATGATTCAAATCGAGCTCGTGGAACTGGCACATACTTCCCTAACCCAGTATGTTCCTCCTTTCATGATCTTATGTTCATATTATTAAGCGTGTTATGCACATAGAATTCCTTGAGCTTTGTGAACCATCTAAGAGTCTAGGTTTGGCACAAGTGGTAGATAATACACCTTCTATATAACTCAAATTGCTAAGGAAGATGCACATTTGTGAATAGTATATCCTTATTCTTTCTAACAAGTACAACTTTAAACCTCATTTTGTGTGAACTTTTGGCACTTTTTTTCACATACTATGCATATCAATGCATGATTCAATAATTTACTATTCCCTCTGACCCAAAATATAACAACTTTTGTCCAGATTCGTAGTACTAGGATGTGTCCCATCCGTTCAAAAGTTGCTATATTTTGTGAGAATTTTTCATTGTTGGATTTGGCCATACTATAGAATATAGTATAGAGCATACCCCCATTAGTTTTATGTTTCTGCTGCAGAGCTTTTTTCATTTTGCAGGGTTAGCCATTATATTTGTGTCATTTTGAGGTGCTGCCTTGTGTTTTGCTGACTTTGTTCACCTTGTTCGATTTGTAGAACTTGTCCAAAGACAGATCACCTTCTGGACGAGGCGGAAGGGGAAAAACTCATTTCCTGCCACATAACCATCAAAGACCACACCACTACGGTAGAGCTGATATGTCAGCAGATTTGACTCCTTCGGAGGAATTGAGACATATTTATGATCCTGATGCAAATGACTTGGGAATCCCCTCTTCACTGCGCATATCAATACCTTCTCCATCTTCGGAAGCTCCAAGGGAAATTGTGCATGGCAATGGTTTTATTCAGCCTCCAGCTAAGAAACTTGAGTTTGGGACCTTGGGAGCATTGCCTTTGGAAGTTACATCCCAAGAGCTTGGTATTAACAGATTGAATACTGCTTCCGACAGCCAACCTTCAGCGTCTGCAAGCCCTATGTCTCTGGCAAATAATCCTGGAATTAGTTCTAATCAAATGAGGTAAGTATGCTTCCTTTTTTTAGCTGTCAAAGTCAACAACGTGTCAACGTCAAGTGTTTATCAGAGTCATGCCATAACTAATAATTTCCTAAAGAGAAATTGCGGTCCACATGCATTCTCCAAAAAAATATGGTATGGCAATCATCAGTATTTTCAATCTAAACATGAAAAGCATTATTGAAAATGAAAATGCTCTTTTCCCCTCTTTTCCTTATTACCTCATTCACCTTGTAACTTAACCTATTCAGTTCTAATGAATTTTTAAGAAATTATGTTGCATAATTCCTCATTAAACAATTTACAGGAATGCTCAGCCATATCATCTCAAGGACAACGGTGATTTCCCACCGCTATCTAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034621