Os11g0207000

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Revision as of 09:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0207000| Description = Conserved hypothetical protein| Version = NM_001073994.1 GI:115484636 GeneID:4350031| Length = 8678 bp| Definition ...")
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Gene Name

Os11g0207000

Description

Conserved hypothetical protein

Version

NM_001073994.1 GI:115484636 GeneID:4350031

Length

8678 bp

Definition

Oryza sativa Japonica Group Os11g0207000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5382246..5390923

Sequence Coding Region

5383014..5384084,5384179..5384301,5384489..5384537,5384616..5384830,5384946..5385014
,5385140..5385234,5388560..5388653,5388867..5388936,5389465..5390423

Expression

GEO Profiles:Os11g0207000

Genome Context

<gbrowseImage1> name=NC_008404:5382246..5390923 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:5382246..5390923 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgccgtcggggccgctcaacccgatgggtcccgggcagccggtgggcgccgccgcctcgctgctccggacgagctcaagcctgcttagtggtggtcagcaggggatgggcagtggcggaggcatgattccttcgcagtcgcccttctcatcccttgtgtcgccgcgcacgcagtttggtgctaatggcctgctgggaggtggctccaatgtttcctccctgctcaaccggccgtttgggaatggtggacatatgctcggtccggggttgatgccaggtggtggtgggattccaatgaataccctccagcagcagagaggagggcttgatggtgctggcgatttggttggcgtgggaggttctgatcctctctcgtttccttcatcgtcgcaagttagtttgggcaatcagctgggttcagataatctgcatcaaccaccgcaacatcagcaacaacaacagcagctggatgctatgcacgacttgcagcagcagcagcatcatcagcaactgccaatgtcttacaaccaacaacatttgccaccgcaaccaccacagcagccacaggctacagtgaagttggagaatggtggcagcacaggtggggtcaaattggaaccgcagatggggcagcctgaccagaacagctcagcccagatgatgcgccatgctagcaatgttaaaattgagcctcagcagttgcaagctctaagaagtttgagtgcggtgaagatggagcagccgacttcagacccatcagcattcctgcaacagcaacagcagcagcaacatttgctgcagctgacaaagcagaaccctcaagctgctgcggctgctcaactgaaccttttgcaacagcaacggatattgcaaatgcagcagcaacagcagcaacaacaacaacagattctaaagaatctgcctttgcagagaaaccaattacaacagcagcagctacttcgccaacagagtctaaacatgagaactccaggaaagtcggccccttatgagcccggaacctgcgcaaagagattgacccattacatgtatcatcaacagaacaggccacaggataacaatattgagtactggagaaattttgtcaatgagtatttttctccaaatgctaaaaagaggtggtgtgtatctctctatggaagtggtcgccaaactactggagttttccctcaggatgtatggcattgtgagatatgcaatcggaagcctgggcgaggctttgagaccacagttgaggtgttaccacggttgtgccaaatcaaatatgccagtggtacattggaagaattactatatgtggacatgccacgtgaatcgcagaatgcctctggccagattgttttggactataccaaagctatccaggaaagtgtattcgagcaattgcgtgtggtacgcgaaggacatctaaggatagtttttaatccagatctcaagatcgcgtcttgggagttttgtgctaggcgacacgaggaacttattccacggagatcaataataccacaggttagtcaactgggcgcagttgtgcaaaaataccaaagcgctgttcaaaattcgacaaatctgtcaactcaagacatgcagaataattgcaactcgtttgttgcatgtgcccgccaattggctaaagcactggaggtgccattggttaatgatctgggatacacaaaacgatatgtgcgctgccttcagattgcagaggtggtaaactgtatgaaagatttaattgattacagcagacaaaatggatctggaccaattgctagtttgcatagctttcctcggaggacttcatcaggggtcagccctcaccagtcacagcagcaacagcctgaagagcagcaatctataccgcagagttcaaaccaaagcggtcaaaatgctgctcccatgaccggtgtgcaggcttctgcctctgcaaatgcagatgtgacatcaaataattctctcagctgtgcaccctcaacgtctgcaccttcaccatccgttgttgggctcctccaaggttcaatgaactctagacaagatcatccaatgagcagtgctaatggtccatataccagtggaaacagtgctgcaattcccaaggtgaactcgacaacctcactgcagtcaaatccatctacctcttttccttcacccatgccaacaacatccaataacaacatgatgcctgcccctcagagcacaaaccaactcagctccccaaccacatcatcaaacctaccgccaatgcagccacctgctactcggcctcaggagcctgagccaaatgagtcccaaagctcggttcagagaatattgcaagatttgatgatgtcaccgcagatgaatggtattggccagcttgggaatgacatgaaaagaccgaacggacttacatctagtgttaacggagttaattgtttagttggtaatgctgttacaaataactcaggaatgggaggaatggggtttggggccatgggtgggctaggtccaaatcatgcagctagtggattgagaactgcaatggtgaacaatgcgatggcaatcagtggtaggatgggaatgaatcacagtgcacatgacctatcacagttgggccaactacagcagcaacagcaacatcaacagcagcagcagcagcagcaacatgacttaggaaaccaactgttgaatggacttagagcagcaaacagcttcaataaccttcagtatgactggaaaccatctcaataa</cdnaseq>

Protein Sequence

<aaseq>MMPSGPLNPMGPGQPVGAAASLLRTSSSLLSGGQQGMGSGGGMI PSQSPFSSLVSPRTQFGANGLLGGGSNVSSLLNRPFGNGGHMLGPGLMPGGGGIPMNT LQQQRGGLDGAGDLVGVGGSDPLSFPSSSQVSLGNQLGSDNLHQPPQHQQQQQQLDAM HDLQQQQHHQQLPMSYNQQHLPPQPPQQPQATVKLENGGSTGGVKLEPQMGQPDQNSS AQMMRHASNVKIEPQQLQALRSLSAVKMEQPTSDPSAFLQQQQQQQHLLQLTKQNPQA AAAAQLNLLQQQRILQMQQQQQQQQQQILKNLPLQRNQLQQQQLLRQQSLNMRTPGKS APYEPGTCAKRLTHYMYHQQNRPQDNNIEYWRNFVNEYFSPNAKKRWCVSLYGSGRQT TGVFPQDVWHCEICNRKPGRGFETTVEVLPRLCQIKYASGTLEELLYVDMPRESQNAS GQIVLDYTKAIQESVFEQLRVVREGHLRIVFNPDLKIASWEFCARRHEELIPRRSIIP QVSQLGAVVQKYQSAVQNSTNLSTQDMQNNCNSFVACARQLAKALEVPLVNDLGYTKR YVRCLQIAEVVNCMKDLIDYSRQNGSGPIASLHSFPRRTSSGVSPHQSQQQQPEEQQS IPQSSNQSGQNAAPMTGVQASASANADVTSNNSLSCAPSTSAPSPSVVGLLQGSMNSR QDHPMSSANGPYTSGNSAAIPKVNSTTSLQSNPSTSFPSPMPTTSNNNMMPAPQSTNQ LSSPTTSSNLPPMQPPATRPQEPEPNESQSSVQRILQDLMMSPQMNGIGQLGNDMKRP NGLTSSVNGVNCLVGNAVTNNSGMGGMGFGAMGGLGPNHAASGLRTAMVNNAMAISGR MGMNHSAHDLSQLGQLQQQQQHQQQQQQQQHDLGNQLLNGLRAANSFNNLQYDWKPSQ </aaseq>

Gene Sequence

<dnaseqindica>769..1839#1934..2056#2244..2292#2371..2585#2701..2769#2895..2989#6315..6408#6622..6691#7220..8178#gttttttttttcgttttcttttttcttcctcgctttctctctctctctctcctcctctccctcttcttcttcttctctgccaaatcccatcgcgaaggcgagagagagagagagagagaagaaaaagtgaggggattaacaaactcgcgagtttttcttttttttttttgtttattgtgtgaatttggcccacgtcggcggcggcggcggaggagctaaaccctagccggaggtgaggtggtggtggtggtggtcgggaagtggcggcgccggtggtggggcgggggggcgatttggcgcgcgcggccgagctccggatcgccggatttgtgcgtgagcgcgtggagtttgtggcggtgtgctcgtgttgctgttggtggtgaggtgtgaggtgaggtggggtggtgtggcttctgctgctgctgctactgctgctgctggtgcttaattttgctcgggttcgtggggttgggaagcgagggatgcgatctgggaggtgttcgggagctcggtgttgcttaattccggtgctggtttgcggtggtgcgcgcgcggcttcttctcggggtggatttggtggtggttttttttgttgccctcgttgttgcgggtggatttcggggggagggagagtttgagggatgactgctcgttcttgctcaattccggtggatcttacggtggaaggatggcgagctgagtaaaggcgcgcgatatcttgctgcggtttgtgcggagcttcggagcactttgtcattgctggcaaggatgatgccgtcggggccgctcaacccgatgggtcccgggcagccggtgggcgccgccgcctcgctgctccggacgagctcaagcctgcttagtggtggtcagcaggggatgggcagtggcggaggcatgattccttcgcagtcgcccttctcatcccttgtgtcgccgcgcacgcagtttggtgctaatggcctgctgggaggtggctccaatgtttcctccctgctcaaccggccgtttgggaatggtggacatatgctcggtccggggttgatgccaggtggtggtgggattccaatgaataccctccagcagcagagaggagggcttgatggtgctggcgatttggttggcgtgggaggttctgatcctctctcgtttccttcatcgtcgcaagttagtttgggcaatcagctgggttcagataatctgcatcaaccaccgcaacatcagcaacaacaacagcagctggatgctatgcacgacttgcagcagcagcagcatcatcagcaactgccaatgtcttacaaccaacaacatttgccaccgcaaccaccacagcagccacaggctacagtgaagttggagaatggtggcagcacaggtggggtcaaattggaaccgcagatggggcagcctgaccagaacagctcagcccagatgatgcgccatgctagcaatgttaaaattgagcctcagcagttgcaagctctaagaagtttgagtgcggtgaagatggagcagccgacttcagacccatcagcattcctgcaacagcaacagcagcagcaacatttgctgcagctgacaaagcagaaccctcaagctgctgcggctgctcaactgaaccttttgcaacagcaacggatattgcaaatgcagcagcaacagcagcaacaacaacaacagattctaaagaatctgcctttgcagagaaaccaattacaacagcagcagctacttcgccaacagagtctaaacatgagaactccaggaaagtcggccccttatgagcccggaacctgcgcaaagagattgacccattacatgtatcatcaacagaacaggccacaggcaagtttttgggttattcctaacaagtaatttagtgttatgtgaaggccatgcgcttacagtttagtgtctctatttgttccttttggtgcaggataacaatattgagtactggagaaattttgtcaatgagtatttttctccaaatgctaaaaagaggtggtgtgtatctctctatggaagtggtcgccaaactactggagttttccctcaggtttgatgtgctgtttccgacttgccattttttaatctagaatatagattatcttgttcatatattttcttatgcaaggaagttctgttctattatttaattggcaggtgcagagtagtgacagtgcctcacattttaaatttcctttcaaattgttagttgaagttctctatatttgcccttgtaggatgtatggcattgtgagatatgcaatcggaagcctgggcgaggctttggtaagcattattttaatttgcacatgtttctttgtcaattctgtttttacatccacttatgccactacacctttacagagaccacagttgaggtgttaccacggttgtgccaaatcaaatatgccagtggtacattggaagaattactatatgtggacatgccacgtgaatcgcagaatgcctctggccagattgttttggactataccaaagctatccaggaaagtgtattcgagcaattgcgtgtggtacgcgaaggacatctaaggatagtttttaatccagatctcaaggtattatatttttaatttattatttgtctttttttttggttactggtgggcctttaaaattagttgtataataaatggtgccttttgaactaaagcatgtttccttttcttgaagatcgcgtcttgggagttttgtgctaggcgacacgaggaacttattccacggagatcaataataccacaggtatttagccctatagctatatagagatttttattcaagacaaatgtcttatttcaatattctgatttttgggcaaaatgggaaagggttcaatatattttgtgacgcttggtgtttctaagcaggttagtcaactgggcgcagttgtgcaaaaataccaaagcgctgttcaaaattcgacaaatctgtcaactcaagacatgcagaataattgcaactcgtaaggagattttctctgatgccctcaatactttccatgttcagtttattgcaaaatcattaatgctttatccaccttgctccgatatgcatatttttgtgttcttttgaaatttatcttatttgcaattgcaaagaagccgtgtctactagtgtaaatacttttattaactctatgctagcgtgagctgtcttccaaaatgggacgtagcctctgtctcattcttcgagttcagggccaagctgtacaaatagttaaatactagtattccgtagcctaaccatttagattttgtgtcatagcactagatagatttgcactatataatggatgtacatgaattttcagttagaagtcaaatggtagtgtgagggcatacacaatgtggaagaactccgatctggctcctctttgtatcctgccagttaccttatcttttgcattctggttcgatgtctatatcccccgtaagaaaattgacattatgccgttgtcaaagtgggtttcactggaatgccatcctgcaaatgggtttcgttaaaatgtcattctcaaatagggcaacacaccacaatgccatttcttccatttattctcaatcaaatgaattttgccctgtttttcttgatgagctgaccaaaatacgtcacgctcgttctctctctctgtctcgctgggctgtggctgccgtcagcaatgcggcgccattactgagctctggccaccccgcatcaggaaggatgggaccaacgccgttgtgcacccaccgcacgccaccgcactctcccgatgaggacagctggcggcagagctccatgaggatattcgcgcacgagcatgatgaggttggtggcgtgcaatggagctggaggaggccactgctgcttgaggaggctgcggtggcgctgaaggaggccgctggtgcgagagcttggggaggacaccggcatggaagctggaaaaggccggtggtacgggcggcgatgcaggagcttgagttgttctcctctgtttctgcctcaatccatggcaggtgcaatttcatcaattgaagttgcaaaagagggcaaaattaaacaaatgaattaaaaagggatgaaatggcattctagcaagtagctaccatttgagagtggcattttagcgaatcccacttaagagatggcatttcagtgaaacccacttttgaggatggcatgtattcaattttctcattgcctgcagacttgtctgttggcttgatgctgccaccagtaagcttgagaaagcggagcagcagcagcagcatgtgaagaggtgtcgagagtctgagaaatacataggatcatgagatcaggactttaggagaagatgaggcgaagaggatgatctcctgggttcacttgagagaagagatggctgttgatctggtttgggggcatgatttagggaaggagggagagggtggagatatgggcttgtagattgtgtgtctgagtggttactagtagtaggctgccctgagtaggtgcgaaaataattctccgagaccaagtctctgtttacaccgtcctcaaaacatgacaggtagacataactgccatctacaagtagttaattctagagtacgttagtgctttgagtagggtctaaacagagacctggtctaggattattgttgtagcgggacttttttcctttaacctgttctttttactggctataattggtatatgatggattttcactgaatataactactgctaattgctggctaggcacctgcctagtgtccaagtgcccccaaagtgccaaaacacagtgctgtgcaaatggcgtgaggcatatgtggttttctggtccactggttgagttcctcatggcacggtagttttgtactgtactctgtgatgtatgcagtcctgcatgtaattctctactgaactacacgcattcccccgaggtatttcgattaagacgcatccaaaactgtggccaaggaaggccacggaagaaggtcctacatgcatacagcctttctgcatgtagtagatggaaatttacttatttgaaacattctatggaaatttcatttatttctttttctaattggatctctgagacaaattatgcctgataagaaagttactattgaggagcacttacaatggtctagttagaaggcaagttagagcagcattattcaagtagcgtaacatgtggaattaacatattttgtgttacatattttgcatgtttgacatgtgcattaacccatataggcgaaatatctattaaaatatatagttgagactacagaatgagatgttttacaaatatacaacattcttttaatgccactgtagtgtgtgaaggcgttacgcaaaacaaaggtgtggggataaccactgaattttgaaggtttgcgacccagtgattttggataagtttagctcactgaccatcagccccctaaaaggttaagcttccaggggaacactggccatttattcacgtccatgttcatctcaggtctatgatgtggatggttaagtgatgttggatgtgtatacagaaaaaatatcagtgcaaagtattctggacctatgggtgtatggtattgttctagcaccatgtgttcttattctgttagggaagataaataatttatgtgttcttagatgccatgcatttattctccataaaagttgaccttaatccatttctgagataacaattacataaaaatgttgttgctatagaaggtagcattttagctagtaagggatcttggagacttggattacacacatgatactggatattacggtgacatgctcaagcaagatgtttcacatgtattctgtttatcatctgcttatctccttctgtagaggtcactatctattgacaagaaatactattgttttttttagggatagatcaaataattaagttatttaaaaaagaggtggtgatggtgtgggtctacaacttttccctcaattcagatctttcaagtgtgcattacttgaaggatctttttgcatttgaggattgttttattgcttttttccctttagtacctttggtatgtttgcttaagtacactattttgctttaatgaattttatgtcgtagaaatacctacttatgagggtagaaaaatgtgtgcttttcagggcccactttccttgctgaccatttctgtgccaacttttatgtatttaataaaagtttatgtaccaacttttattgattttgttttgctgtttgattctttttttgagagaaacgacatttgagttctgcaaattgtacttatatttcaatcttttaccattaggtttgttgcatgtgcccgccaattggctaaagcactggaggtgccattggttaatgatctgggatacacaaaacgatatgtgcgctgccttcaggtacacttttacatgaatctgtttctatcatctgttctggatttctacatccaacaaatttagattattatcatatgcaaaagtcggcattttgtacataggactattattattctttgttgtgggcttgtggcacctgttgccatcctctacttcgttgaaactgttttatctgacctattattttgtcatctgaaacattggtacttccagattgcagaggtggtaaactgtatgaaagatttaattgattacagcagacaaaatggatctggaccaattggtacgtcgtttttatcttctgtttactgtgcagtctcatctgatctcatgtcatcttgtttagcattaagtaatcttcacatattatatgatcagttgtacttctacaactcctccgtttgttttcttttgattgtacgttctattcactattttttatgaagacaagtttccaggctgtacaatttttatccatttcccaaattcagtagtgtagttaacaaggaagtagagcatgcaatacatgctcagatgagtaacatgctgttattgatctgtcacaacttccaaccagcgactaataacatgtgtttcaattgagactgttggtagagggctggtttcctgcattttctagttgctttttcgccagatatttgtttcatttgtttttgtttattcaaccttcataacatacttggaatgaacttattctgagatacccttgctgatttttgtctctagccaaagaacatggtagtctgttgctagtgttaatttaacaccacactgctattatttgtttcagctagtttgcatagctttcctcggaggacttcatcaggggtcagccctcaccagtcacagcagcaacagcctgaagagcagcaatctataccgcagagttcaaaccaaagcggtcaaaatgctgctcccatgaccggtgtgcaggcttctgcctctgcaaatgcagatgtgacatcaaataattctctcagctgtgcaccctcaacgtctgcaccttcaccatccgttgttgggctcctccaaggttcaatgaactctagacaagatcatccaatgagcagtgctaatggtccatataccagtggaaacagtgctgcaattcccaaggtgaactcgacaacctcactgcagtcaaatccatctacctcttttccttcacccatgccaacaacatccaataacaacatgatgcctgcccctcagagcacaaaccaactcagctccccaaccacatcatcaaacctaccgccaatgcagccacctgctactcggcctcaggagcctgagccaaatgagtcccaaagctcggttcagagaatattgcaagatttgatgatgtcaccgcagatgaatggtattggccagcttgggaatgacatgaaaagaccgaacggacttacatctagtgttaacggagttaattgtttagttggtaatgctgttacaaataactcaggaatgggaggaatggggtttggggccatgggtgggctaggtccaaatcatgcagctagtggattgagaactgcaatggtgaacaatgcgatggcaatcagtggtaggatgggaatgaatcacagtgcacatgacctatcacagttgggccaactacagcagcaacagcaacatcaacagcagcagcagcagcagcaacatgacttaggaaaccaactgttgaatggacttagagcagcaaacagcttcaataaccttcagtatgactggaaaccatctcaataaagatagaacattacaagttcgacaacacggctgctctcattggcctcattgcttatgaagcatcagtaagagtgccaacacctcgaactgtgtcaaagcatttggcctttgcaataatgctgtcatggaaaaaggtcattcgcgacagcaagcatctgagcctgtcaactgtatgttgtaattgttcgtttagctgcttgtgtgttgtgcaactatggcattttgctgcttgcttcagttgtcttaccgaaagatagagttaaaaggattagagccttgcctgcacctgttgctatcctttgatggtacggtgttacttcttacccggaaaagaagttttacctccctttttttccatgtcagatgacatccgatatgtaatttatcgtcccctccaccttccgcccttagcaagcatatgttctgatatctttctttgcctggggattctctctttgtagccttacttgactttgtataagctgccataatttagtagt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0207000, RefSeq:Os11g0207000