BGIOSGA034654

From RiceWiki
Revision as of 08:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034654| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034654, complete gene.| tag = OS11G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA034654

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034654, complete gene.

LocusTag

OS11G0107000

Ensembl Transcript ID

BGIOSGA034654-TA

Ensembl Protein ID

BGIOSGA034654-PA

Length

3498

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:62737..66234

Sequence Coding Region

62737..63359,64689..64860,64964..65172,65386..65544,65886..66234

Genome Context

<gbrowseImage1> name=IndicaChromosome11:62737..66234 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:62737..66234 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGAGTGCTCTCTTCTCCCATCTGAGAGAGGTTCACAAGAGAAGCGGAGTTAAGGAGGAGAAGTTGATAATGAAGTCGCCAGCAGCAGCAGGTGAGGCCGCCGGCTGCCACAAGCCGCAGGCGACTGCCACCAACAAGATGACGGTGCTGCAGTCCCCGCTGGGGCTCAGGACCATCCTCACCTCCCTCGTCGCCTTCTTCATCGTCGTCAGCTCCGTCTCCCTCCTCTTCGACCGCAGCCAGGATGCTCAGGCGCAGCTCGCCGTCGCGCAGCATCAGCACCAAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCAACTGGTCGTTGGGACGGTGGGTGTACGACAACTCGTCGCGGCCACTTTACTCCGGCTTGAAGTGCTCCTTTATCTTCGACGAGGTAGCCTGCGACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTAGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAGAGTGGAGTATCGGATCATAAGGGCAGACAGGATTGAGAAACACGCCAATGTCTGGAAGGACGCTGATTTCATCGTCTTCAACTCCTACCTTTGGTGGAGGAAGCAGAGGGATGGTATGACGATGAAAGTCATGTATGGTTCATTTGAGGATGGGGATGCAAAGTTAGATGAGGTGGAAATGGTTGATGGTTATGAGATAGCTCTCAAGAAACTAACTGAATATCTTGGAGCCAATATCAACAAGAACAAGACTAGAATCTTCTTTGCAGGCTCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAGGAGATGACAACAACAAGTGTCTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCACAGACTACGGCATGATGGACAAGGCGAAGGAGATCTTTGGAACATTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCACCCAGCTTTCTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTCTGACGAAAGAGCAGATTGCAAACCCGAGCATCTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTCTGGAACGAGTTCTTGTATGCGTACCTCATGCACAAATGA</cdnaseq>

Protein Sequence

<aaseq>MWSALFSHLREVHKRSGVKEEKLIMKSPAAAGEAAGCHKPQATATNKMTVLQSPLGLRTILTSLVAFFIVVSSVSLLFDRSQDAQAQLAVAQHQHQEVQLKQKPASAAVGEQKSVFVDQSSLRSQEAQVQWTSELQDVATDSGDGGVDGEEECNWSLGRWVYDNSSRPLYSGLKCSFIFDEVACDKYGRNDTKYQHWRWQPHGCNLPRFNATKFLEKLRNKRLVFVGDSVNRNQWVSMVCMVEHFIPDGRKMRVYNGSLISFKAFEYNATIDFYWSPLLLESNSDNPIIHRVEYRIIRADRIEKHANVWKDADFIVFNSYLWWRKQRDGMTMKVMYGSFEDGDAKLDEVEMVDGYEIALKKLTEYLGANINKNKTRIFFAGSSPAHSWASNWGGDDNNKCLNETEPIQIEDYRSATTDYGMMDKAKEIFGTLEPKGIHVQILNITQLSEYRKDAHPTIFRRQYVPLTKEQIANPSIYADCTHWCLPGVPDVWNEFLYAYLMHK</aaseq>

Gene Sequence

<dnaseqindica>1..623#1953..2124#2228..2436#2650..2808#3150..3498#ATGTGGAGTGCTCTCTTCTCCCATCTGAGAGAGGTTCACAAGAGAAGCGGAGTTAAGGAGGAGAAGTTGATAATGAAGTCGCCAGCAGCAGCAGGTGAGGCCGCCGGCTGCCACAAGCCGCAGGCGACTGCCACCAACAAGATGACGGTGCTGCAGTCCCCGCTGGGGCTCAGGACCATCCTCACCTCCCTCGTCGCCTTCTTCATCGTCGTCAGCTCCGTCTCCCTCCTCTTCGACCGCAGCCAGGATGCTCAGGCGCAGCTCGCCGTCGCGCAGCATCAGCACCAAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCAACTGGTCGTTGGGACGGTGGGTGTACGACAACTCGTCGCGGCCACTTTACTCCGGCTTGAAGTGCTCCTTTATCTTCGACGAGGTAGCCTGCGACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGGTATCAACACGACTCATCTCCATTCTAATCCACATCAATTTTGACACTACACTCACTACTGCTGCAAGGATCTGAAACTGCACTACTACTTAGTACTACACTCCATTCGTACGAGCTGTCTCAGTGTTTCTTACCAAACTTCCAACTTGAGCTACTCATGGTAACAAAAACGTTTTTAGTTTTGTGAAAGCAGGGGAAAATGTTCTCTCCTAGTCCTGCAAAAAAAAAAAATCAACTTTTTTTTTCCAGATTGATCTTGTAACTCAGAGCAGGGTTCAACTTTTCGTTTTCGGTGTTTGTATCGGACGGTGCCAATATGGCGAAATTTCTGAAATTTGGGACAAAATTTAGTCAAATTTGAACAAATATTACCAAAATTCATGATTTTTTTTAAAAAAATAATTTCGGCCAAAATAATATCGTATTGGAGGGGTCCAAAATTTGGAAAATTTCAATCTGAAATGTCGAAACCTGACCCAGAGTCCCAGGTGCCAACTGGAAAACATATAGAGAAAAATCGGTTGGTTTTGAGTTCTTTAAACAACGGTTAGTTTTGAGGAATAAATTATTGGACAGCAAAAGATCGGTTGTTCTTTTAGATAACCGAAGATACAGTTAGTGAAAGATCAGTTATGAGAGAACCAATCGCCAATGCTTACTAGCTAAAGAACTTCAGAAGTTCTTTTTTTTTTCTTCTGACATGGTGTCGCACTCATAAGAATGGACCTTTCAAATACCTATATGAAGTAATGGTCAAATCCATTGGAAGTTTTGAGGAAATATAACATGAGCTCCAAGCTCTTGGATAATTTCCTTTGTGTCATCCTCTCTTCAAATTCCTGTACTGTTTTGTGAAGCATCCAAACAACACAATTGAGTAATTCCTATATTGTTCATATTCCTTATGATTACATTGACACGTCACTCCAATTTCTGTGCTTTTATTATTCTTGTGTTTTCCTGTGTTTCTCAATTCCTTTGATCCAAAGAGTCAGTTAATATGTTCCTCCCCTAATTAATATCCAATTAAAACAGTACAAGGTACCTAGTGGAAAAAAAAACGTCGTTTATAATGTGTCCAGATTGCTAAATTTATAATATATGCATGGTTGCTTCTGTAAGCCAATGGCCAACTAGAAAACGTACAGACAAACTATTGATTAGTTTTGAGTTATTCTTAAAAAAATTGTTAGTTCTCAGGACTGAAATATTAACAGTGAAAGATCCGTTATGAAACACAAACCAATCACTATTCACTAATGCTTACTATGGATCAATTGTTTTTTTTTTCTGATATATGGTGTCGCAATCTTTACCCTGTCAAAACAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTAGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGTATGTCTCACTAATCTCTTCATCCCAACATGCTTCTGAATTCAGAAATCAGAAGCACTACTCTGTGTTCTCTGATCTGAACATTTTCTTTTGTTTGCTCCAGGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAGAGTGGAGTATCGGATCATAAGGGCAGACAGGATTGAGAAACACGCCAATGTCTGGAAGGACGCTGATTTCATCGTCTTCAACTCCTACCTTTGGTGGAGGAAGCAGAGGGATGGTATGACGATGAAAGTCATGTAAGTACTTAATTATTACTTCTTACTTTCCTGTTCAGGAAAAAAAAAGGTTTCTCTTTTTTCTTGTTCCAATGCAACAAAGTGAGATTTGGAGGCATCAGAAAGTTTTCTTACTTTTTTCAGTCAAAAAAAGTTTCCTTTTTTTTTCCTCTTTCCAATGCAACAAACTCTTATTTGGAAGTATGATCAGTAAGTCATTATGCAAAAATGTAGGTATGGTTCATTTGAGGATGGGGATGCAAAGTTAGATGAGGTGGAAATGGTTGATGGTTATGAGATAGCTCTCAAGAAACTAACTGAATATCTTGGAGCCAATATCAACAAGAACAAGACTAGAATCTTCTTTGCAGGCTCATCACCTGCCCATTCCTGGTGAGAGAACGTACAACTCTTGCATCATTTCTCAACTGCGAAACATTCTGAAAACCAATAAAATTCATCAGCTCTACTCAAGTTCAAAGCTTGCTTATATTTTTGACACTGAAAATGAAAAAAAAACACGAATATTAGGGAAAGACCTAATATTAAATAATTAGAAGGGATGAGACTTCGAACCCAGGCCGGTTAGCTCTAGGCCCACCACCTTGTGGAGCTAGCCTGAAGAGGCCCGGGTGTTTCTCATGACACTGAAAATGACAATCAATCTACACTGAAAATGACAATCATGTGCATTCTGACAAGAAAATGCTGGAACAAAAATGGATGTTTTCCAGGGCTAGCAACTGGGGAGGAGATGACAACAACAAGTGTCTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCACAGACTACGGCATGATGGACAAGGCGAAGGAGATCTTTGGAACATTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCACCCAGCTTTCTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTCTGACGAAAGAGCAGATTGCAAACCCGAGCATCTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTCTGGAACGAGTTCTTGTATGCGTACCTCATGCACAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034654