BGIOSGA034711

From RiceWiki
Revision as of 08:56, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034711| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034711, complete gene.| tag = OsI_349...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA034711

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034711, complete gene.

LocusTag

OsI_34932

Ensembl Transcript ID

BGIOSGA034711-TA

Ensembl Protein ID

BGIOSGA034711-PA

Length

4794

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:945409..950202

Sequence Coding Region

945409..945684,946056..946184,947168..947224,947305..947603,947929..948020
,948137..948351,948532..948715,948837..948931,949624..949728
,949969..950025,950152..950202

Genome Context

<gbrowseImage1> name=IndicaChromosome11:945409..950202 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:945409..950202 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCTCATCATGTCATGAGCATCGCCGCAGCAGCAGTAGCCATGCTTCTCCTGATGGCGTCGTCGCCGGCAGTCGCCGGCACGGCGGTGCTCGGCCGGAAGGGCGGCGCCATGACTGACGACGATGTCGTGGGAGGGCAGGCGGCGACAGGGCCGGGGAAGTACGCCGTGATATTGGACGCCGGCAGCACGGGGACGAGGGTACACGTCTTTAGGTTCGACAGGAAGATGGATCTTCTCAAGATCGGCGACGACATCGAGGTCTTCGCCAAGGTGGATCCTGGACTGAGCTCGTACGCTGGACGACCGCGGGAGGCAGCCAACTCCATACAGCCTCTGCTTGATAAGGCCATCCACGTTGTCCCTAACTGGCTTATGAAGAAAACTCCCCTTAAACTTGGGGCAACTGCTGGACTCAGACTTATTGGAGATGAAAAGGCAAACCAGATTCTTGAAGCGGTCAGAGATGTTGTCCACACCAAGAGCAAATTTCAGTACAATCCAAACTGGATCAATGTTCTTACGGGATCTCAAGAAGGATCTTACATGTGGGTTGCTCTTAACTATCTTCTTGATAGACTGGGTGAAGATTACTCTAAAACAGTAGGCGTGATTGATCTTGGAGGTGGATCCGTACAAATGGCCTATGCCGTCTCATCAAGCATTGCTGCTAACGCCCCAGAGGTGTCTAATGGGCAGGATCCCTATATTACAAAGGAGTATCTTAAAGGGAGAGATTACAACATTTATGTGCACAGTTACTTGCATTATGGCGCTCAGGCTTCTCGCGTAGAGATACTGAAGAGAAAGAATGGGCCATTTAGCAACTGCATGTTGCGTGGATTCAAAGGCAAATTCACCTACAACGGGGAGCAGTACGAAGCAATGGCAGCACCACAAGGTGCAGACTACCACAAATGCAGACAAGATGTGGTGAAGGCACTGAACCTAGACTCGCCCTGCGAAACCAAAAATTGCAGCTTCAACGGCGTGTGGAACGGCGGCGGCGGCGTTGGGCAGGACGAGATCTACGTCACATCCAGCTTCTACTACATAGCCTCCGGTATTGGGTTCATCGACAGTGAGGCGCCCAGTGCAAAGTCTACACCAGCGGCGTACAAGGCTGCATCAGAGAAGGTTTGTATACTGAGCATCGAAGAAGCGAAAGCAGCATACCCAATAGCTCGTGATCACGCCTACTTATGCATGGATCTCATCTATCAATACACCTTGCTTGTCGATGGCTTCGGTTTGGAAGCAACGAAGGAGATTACTCTCGTAGAGAAGGTGAAGCATGGAGAGTACTACATAGAAGCAGCGTGGCCATTGGGCACTGCCATTGAGGCTAGACGTCCCCAGGCTGCAGCAAACTCCATACTGCCTCTGCTTGACAAGGCCAACACCGTTGTCCCTGCCAGGCTTATGAACAAAACTCCCCTTAAACTTGGGGCAACTACTGGACCCAGACTTATTGGAGATGAAAAGGCAAACCAGATTCTAGAAGCAGTTAGGGATGTAGTCCACACCAAGAGAAAGTATCAGCATAACCCGAACTAG</cdnaseq>

Protein Sequence

<aaseq>MAAHHVMSIAAAAVAMLLLMASSPAVAGTAVLGRKGGAMTDDDVVGGQAATGPGKYAVILDAGSTGTRVHVFRFDRKMDLLKIGDDIEVFAKVDPGLSSYAGRPREAANSIQPLLDKAIHVVPNWLMKKTPLKLGATAGLRLIGDEKANQILEAVRDVVHTKSKFQYNPNWINVLTGSQEGSYMWVALNYLLDRLGEDYSKTVGVIDLGGGSVQMAYAVSSSIAANAPEVSNGQDPYITKEYLKGRDYNIYVHSYLHYGAQASRVEILKRKNGPFSNCMLRGFKGKFTYNGEQYEAMAAPQGADYHKCRQDVVKALNLDSPCETKNCSFNGVWNGGGGVGQDEIYVTSSFYYIASGIGFIDSEAPSAKSTPAAYKAASEKVCILSIEEAKAAYPIARDHAYLCMDLIYQYTLLVDGFGLEATKEITLVEKVKHGEYYIEAAWPLGTAIEARRPQAAANSILPLLDKANTVVPARLMNKTPLKLGATTGPRLIGDEKANQILEAVRDVVHTKRKYQHNPN</aaseq>

Gene Sequence

<dnaseqindica>1..276#648..776#1760..1816#1897..2195#2521..2612#2729..2943#3124..3307#3429..3523#4216..4320#4561..4617#4744..4794#ATGGCGGCTCATCATGTCATGAGCATCGCCGCAGCAGCAGTAGCCATGCTTCTCCTGATGGCGTCGTCGCCGGCAGTCGCCGGCACGGCGGTGCTCGGCCGGAAGGGCGGCGCCATGACTGACGACGATGTCGTGGGAGGGCAGGCGGCGACAGGGCCGGGGAAGTACGCCGTGATATTGGACGCCGGCAGCACGGGGACGAGGGTACACGTCTTTAGGTTCGACAGGAAGATGGATCTTCTCAAGATCGGCGACGACATCGAGGTCTTCGCCAAGGTAATTAACTAATCTACTACTACTATAATTAATCTACCTCTCTATTGATTACTCCCTGGGTGAATTTTTTTTAAGAAAAAAAAACATAATCTCTCTATAAAAAAGTATAAAACGTATTAATTTTATTTCGTTAGAATAAGACACTAATAAACAAGTACCGTATTCTAATAGGATATTATTTTGTGGTAAAAATTAATGTGAGTATATTCGAAAATACTTAATTTTAATTACACATTTATGTGTAGTATAGTAACGACTGTCGGTGGAAGTTTCATCCTAACCAACTAAAATAAGTCATATATTTTTATATTTTTTTGATAGAGAAAGTACTTGTAAAGATAAATAAAAAAAATTTCTTTTTGTTGTTACAGGTGGATCCTGGACTGAGCTCGTACGCTGGACGACCGCGGGAGGCAGCCAACTCCATACAGCCTCTGCTTGATAAGGCCATCCACGTTGTCCCTAACTGGCTTATGAAGAAAACTCCCCTTAAACTTGGGGTACTACTTACCTAACAAATTTCAATATTGTTCTTCATCTAATTTAACAAAACATGCACCACTGCCATACAATTATTATAACAAAATTTAAGTTTTCTAAAAGAACAGGATTCAATTAAATATTTGATTTGGCCCCTCGTTCTGAGATCTGTGCAACTAGTTGAAAACAACATCAATATAATATATACACAAGAAAAGGCAATGATATTTTGGGCTCTGTGATGAAGCAGTTTTCTTGGATCCTTTACCCAGAAGTTGAATACTCCATCCGTTCAATTTTATAAGGCATATTTGATTTTTAAAAATTCAAACTTTGAAGATTTTGACCAAAGATTAGTAAGCGTACAAATAAATTTAGTTTATAAAAGTTAAGCCTATAGATTTGTATTTCAAAGAGCTTTCACATATATAATATTGGTTTCATGCCCATTAAGAATATATATTATGAGAAATTGATGGTCAAAGTTTAGTCCCGAAGAGTTTTTTTATTCGAAATACACCTTACGGCTTGTTTGGTAACTTGATGGAAGGGGATTGGGAGTTTATACAAGGGAATTAATGATGAGATTAAGATGGGAATTTGATTTTTTATCCCAATATCTTGTTTGGTAGAGGAGATGGAAATTGATAGGGAGTTTAGTTGGAGATTAGGTCATTAATAAAAACGGATGGCTGAGATTTGCTTAGACAAAGTAAAGGATGAATTTCCTCCCAATTACCTGCCCCTACCCAGATATTGAAAAGGAGGGAGTTCCTTCCTCAATTCCCCATCCCTATCCCACCAAAATTCTCATGTCTCCCAACCAAACAAAACACTTAATAGCCTCATCCCTCTAAACTCCCAATCCCTCCTACTCCCTCCAACCAAACGGGCCGTTATAGAACTGAACGGAGGGAGTATCGATCATTCAAGCTCAAACCATTTTCCTACTAAAATATTGTAAAATGTTTCTAACTTGCTAATCAAACATTTAAACCTACAGGCAACTGCTGGACTCAGACTTATTGGAGATGAAAAGGCAAACCAGATTCTTGAAGCGGTGCGTATACTTTCAGAAAAAAATATACTACATAAATGAAATGCCTTCAGACCACTTACTTAATTTGATTCATAGTACAGGTCAGAGATGTTGTCCACACCAAGAGCAAATTTCAGTACAATCCAAACTGGATCAATGTTCTTACGGGATCTCAAGAAGGATCTTACATGTGGGTTGCTCTTAACTATCTTCTTGATAGACTGGGTGAAGATTACTCTAAAACAGTAGGCGTGATTGATCTTGGAGGTGGATCCGTACAAATGGCCTATGCCGTCTCATCAAGCATTGCTGCTAACGCCCCAGAGGTGTCTAATGGGCAGGATCCCTATATTACAAAGGAGTATCTTAAAGGGAGAGATTACAACATTTATGTGCACAGGTAAGTAATTTCCTTCTCTGATAGTATTGTTTTAGATGCATGTCAGTCCACAACAATTTGGTGAATAACTGGTGATGATGAACACCTGCAGCTTTTTTTTATCTGAATTTACTGTAAATAATATATGGGAAGCAATTATTCATAGTTTTTATTAGAGAAATTTTATGATCTTTGAGAAAGTACCTAGAGATATCAAGATTTTTCACTGAAAATTTTACTACCTCGAAGTACCTGGTATCTAGAGCTACCAAATTTTACACTAGAAAATATGGTATCTCCTTAAGGATTTGCACTTTTACTAAGATCAATCAGCAATAACCTGCAGTTACTTGCATTATGGCGCTCAGGCTTCTCGCGTAGAGATACTGAAGAGAAAGAATGGGCCATTTAGCAACTGCATGTTGCGTGGATTCAAAGGTGTCAAGCTAGTTTTCCTTATTTAGTTCAAGATGCAAATATAGACAAATCAAATGTTTGGCCAATGCTTAATAATTAATCAAGTGATGTTTATTTTATCATGGGACAAATAAAAGGCAAATTCACCTACAACGGGGAGCAGTACGAAGCAATGGCAGCACCACAAGGTGCAGACTACCACAAATGCAGACAAGATGTGGTGAAGGCACTGAACCTAGACTCGCCCTGCGAAACCAAAAATTGCAGCTTCAACGGCGTGTGGAACGGCGGCGGCGGCGTTGGGCAGGACGAGATCTACGTCACATCCAGCTTCTACTACATAGCCTCCGGTGTACGTCTCATTAACTAACCGGTTTATAGTGGAGTAATCAATTTATCAGGCAGCGTATAAAGTTGGCTATTTACATGAGCATATATATAATAACTCCTATTCAGATTTAATTCTGTGTAAATTATGAATATTGTGATCAACATAATGATATATTGTTCTCTCCAATAATGGGAAAAATAGATTGGGTTCATCGACAGTGAGGCGCCCAGTGCAAAGTCTACACCAGCGGCGTACAAGGCTGCATCAGAGAAGGTTTGTATACTGAGCATCGAAGAAGCGAAAGCAGCATACCCAATAGCTCGTGATCACGCCTACTTATGCATGGATCTCATCTATCAATACACCTTGCTTGTCGATGGCTTCGGTATGTACATATGGACAAATTAAACTATCAATGAAGAACTTGTACTATGTGCCATGTGTATATATAGATGTATATATTCTTGAGAAATGACATGAATATATGCACTGCATGATATATTCAGGTTTGGAAGCAACGAAGGAGATTACTCTCGTAGAGAAGGTGAAGCATGGAGAGTACTACATAGAAGCAGCGTGGCCATTGGGCACTGCCATTGAGGTTATCTCGCCCAAAAAGAAGCATCAAGAGCCTGGCCGGAGTAGCTAGGATATGAATTAATGTACTATTGTTGTGTGTTGCGTGTGTTTCCAGTTTATTGTAACTTGCATGTATATTTGTTGCTAAGTAATAATGGAGCTTAGCTTAATTTACATTCCTTGAACGGATGATTGATCGATCGAACAAGACGACGGGTGATGGAGAGCAGAGGCCGGCAACCCAATAATATTATATTGTGCAATGACAAAAGTAGGTCCAAGGTCAAGGCCCCAAAGAAAAATTGTTCCCCACAGAAAAATAGCCCAATAAATTGGTAAGATACGAATCTAAGTGGGCCAAGTAGGCGTAGTATGTTGAGAAAGAACCTTGTTGTTCAACCTCGTCCTCCGCCGCTGCAGCTAGCAATCCTTATTAAATTGATGGCTCGAAGCTATGGCCCCAATTTGATCCCCTCCGTGAATGTTTGACGTTCGAGAGATATATGCATATGTATGCCTCTGCATTTTGCTGATTTGAATCTACGGTTCTAGACTAGTATCAATTACCTTTATCTCAAAATATAATAATCTAGTACATATAGGATAAGACATATTTTAGTGCTATAAATTCTAGTTTGTATCTTGTCTACTACTTATTAGATTGCTACATTTTGAAATGGAGGTAGTAGTATGAATATCATTTTGTGCAAAAAGGCTAGACGTCCCCAGGCTGCAGCAAACTCCATACTGCCTCTGCTTGACAAGGCCAACACCGTTGTCCCTGCCAGGCTTATGAACAAAACTCCCCTTAAACTTGGGGTACGTACACCACTAAATTGATTTACTCTTCATCTAATTATCAAACAAAACCTACATCAGGAACTTAATCCAAAAATTATTGATACGTACTAATGTTTCTGTATGATGTTTTATCTGACGAAATAGTTTCTTAAAATACTATTTTCATCTTAATGATGATAATGTTTCCTCTCGAACAAAATGGCCTGACTTCTTGCACTCTATAAATTTTGTTCTTTGTTAATTCAATCAAATACGTAGGCAACTACTGGACCCAGACTTATTGGAGATGAAAAGGCAAACCAGATTCTAGAAGCAGTACGTATAATTCCAGAATGATATACATCATATCATACAAAATTTTAACTCAAAACCATTTCTTGCTTTGATTCTAATAAATCTTTATTCTTAATAATCCCTTTAGTACTCTGGGTCTTAATACAGGTTAGGGATGTAGTCCACACCAAGAGAAAGTATCAGCATAACCCGAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034711