Os09g0323000

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Revision as of 07:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0323000| Description = Similar to UDP-galactose 4-epimerase-like protein| Version = NM_001069404.1 GI:115478550 GeneID:4346723| Length = 47...")
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Gene Name

Os09g0323000

Description

Similar to UDP-galactose 4-epimerase-like protein

Version

NM_001069404.1 GI:115478550 GeneID:4346723

Length

4764 bp

Definition

Oryza sativa Japonica Group Os09g0323000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:10003501..10008264

Sequence Coding Region

10003725..10003836,10003922..10004013,10004455..10004537,10004743..10004821,10005450..10005677
,10005758..10005859,10006281..10006416,10006546..10006595,10007953..10008180

Expression

GEO Profiles:Os09g0323000

Genome Context

<gbrowseImage1> name=NC_008402:10003501..10008264 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:10003501..10008264 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggggcgaggtggtggcggtggcggcggcggcggcggggacgagcaggacggtgctggtgacgggaggggccgggtacatcgggagccacaccgtgctgcagctgctcgccgcggggttccgcgtcgtcgtcgccgacagcctcgggaactcctccgagctcgccgtccgccgcgtcgccgcgctcgccggggacaaggcgcggaacctctccttacacaaggttgatattcgtgataagggtggactggaaaaggttttttcttcgacaagatttgatgctgtcgttcattttgctggtctgaaagctgtgggtgaaagtgtgcagaagccattgctttattatgaccataatgttgctgggacaataattcttctagaagttatggcagcccatggatgtaaaaagttggtgttttcatcgtcagctgcagtttatggatcacctaaaaactcaccctgcacagaagagtttcctctcactccacacaatccatatggcagaaccaagctcatagcagaggagatttgccgtgatatataccattcagattctgaatggagcataattttacttaggtacttcaatcctgttggagctcatcccagtggataccttggtgaagacccatgtggaattcctaacaacctcatgcccttcgtccagcaagttgctgtcgggaggagaccgtcacttacaatatttggaaatgactatgcaacaaaagatgggacaggggtacgtgattatattcatgtagttgatcttgctgaggggcatattgctgcactacggaagctgtttgaaagctcaataggatgtcaagcatacaaccttggaacaggaaagggaacatcagtgttggaaatagttaatgcatttgagaaagtttctggaaagaaaatacctttggttattggtccacgacgccctggtgatgctgagattctcttttcgtcagctgctaaagcagagagagaattcaagtggaaggcaaaatatggcatcgaagaaatgtgcagagaccaatggaactgggcgagcaagaatcctttcgggtacgcctcgcccgactccaccaagcagaatggtcattcacactga</cdnaseq>

Protein Sequence

<aaseq>MAGGEVVAVAAAAAGTSRTVLVTGGAGYIGSHTVLQLLAAGFRV VVADSLGNSSELAVRRVAALAGDKARNLSLHKVDIRDKGGLEKVFSSTRFDAVVHFAG LKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCKKLVFSSSAAVYGSPKNSPCTEEF PLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLRYFNPVGAHPSGYLGEDPCGIPNN LMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIHVVDLAEGHIAALRKLFESSIGC QAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIGPRRPGDAEILFSSAAKAEREFKWKA KYGIEEMCRDQWNWASKNPFGYASPDSTKQNGHSH</aaseq>

Gene Sequence

<dnaseqindica>4429..4540#4252..4343#3728..3810#3444..3522#2588..2815#2406..2507#1849..1984#1670..1719#85..312#gaaggtcgaagcagatccactcgcgcgctcgcgagggtgcgtcgcgagcgggaggtcagagaagggggatcggccgatcgatcgatggcggggggcgaggtggtggcggtggcggcggcggcggcggggacgagcaggacggtgctggtgacgggaggggccgggtacatcgggagccacaccgtgctgcagctgctcgccgcggggttccgcgtcgtcgtcgccgacagcctcgggaactcctccgagctcgccgtccgccgcgtcgccgcgctcgccggggacaaggcgcggaacctctccttacacaaggttaatactgtcctgactcctgaggcgatgcgcgcagcggggggttggttggttgtttgtttcgcggcttttggctgcttgggtttgcgtgattttgcgcttgttttttttttttgggggaccagcacgatcggccgatgggggattgggggcccgttccaatgttggcagatctctcccgctgacctgaggccgagtcatttggcctttttttggtgatcattttgattgtttagtgtgtgtagcaagggtgggttactcgtcatggggggaaattttggtgttcttttcttttttttttctgttatacttggcgtgaatttggccgagatcgctagtatttatttcagggtcaaacaaatgtgaagtgatttggattacagccgtatgagttggtttatcgccaagtgcgggtatctatggtaattgtatattagtggaatataactgccgtaaattctcatattgtgctgtacgatcatgaatttcggtcgtttgccttgagtattgattcgaagatgataatggagaagagatatttcttttatccaatagaaaaccggaagagatctgatctaagcataatgccatgtggctggacatgtatacctgtctggtatctcattgttttaggctatccagtttgtatatttcgttcttgccagttcaatgggttgggtcatgggtcgtctatgtattgaaacttatattgaatgatctgaaagatttggatatttactactgagctgtaactaggtaaattagtgtgtcattgtttgttaagaatggcaattagtataattttgattattcaagtttgtactctgggatgaatgggaattttaataacatatgtttaatagtggaactcacatttgtggggctagtagatgagtctacttgcaactgtccaattgggaagatctgcaagttgttgtgccattgccttcattgtttaacataattgtatggcataggcattgcagtatctatacagttggttccagtgaccttatttggtgttattgttattgctatggacaaaacgagtttgccaggctagtgcgttcaatgttctgaattattttagtactggcagttaaaaaaaaacaatttcttgctcttcctatcgcacttgctagaataggtgtgaggtttggtgccagttgtgtagaatatctcatttgtcttcagatatggttatttcaaaggaatgggttaaatactttgatgtacatctggaagtcaatgctacattatgtatttaatccactacataaccttgatcctactgaaaatttttgaaagtccttaaggtacattaaattcaacactattaacttctcttcttccgcaggttgatattcgtgataagggtggactggaaaaggttttttcttcgacaaggtaaaacacgctataaaatagtattatctttttattcctttttacttcttttatacttttcaaaagcagcaatttgtaacatctctgtaaagtaaaagtatctaaattcctaaaatatgtcttttctagatttgatgctgtcgttcattttgctggtctgaaagctgtgggtgaaagtgtgcagaagccattgctttattatgaccataatgttgctgggacaataattcttctagaagttatggcagcccatggatgtaaaaaggtaattacccctcccatatctgtgggctagcttatactccatgaggatgtcttctaaagtaattccttttgattcaatgcatctatacaattttaaaataaaatatttgcttctctgctgtccaatccaattcatgttgtagacttcatgggtttcatttacagtcaacatcattttttatttagtcattgctccaacttctgtaaattataataatgaaccgtgcacctactaggttacttactaggaatggtgatagcatccttgtttttttaatacctgtagctgaaaatcattctgttaataatcatgccaactgtcaatgatttgttttgaggttaaaccagagtatccgttgctttgcttgtatcagactgatgctgacatatatttgttttctcatgtggtcaaatgtttgtagttggtgttttcatcgtcagctgcagtttatggatcacctaaaaactcaccctgcacagaagagtttcctctcactccacacaatccatatggcagaaccaaggtgtgcttatgtctttccctatatttgcaaatgtttgcaccaaatgcttagctgattgcaatcatatatatcaattgcagctcatagcagaggagatttgccgtgatatataccattcagattctgaatggagcataattttacttaggtacttcaatcctgttggagctcatcccagtggataccttggtgaagacccatgtggaattcctaacaacctcatgcccttcgtccagcaagttgctgtcgggaggagaccgtcacttacaatatttggaaatgactatgcaacaaaagatgggacaggggtaatctcctttgagatacattcagttaccttctttactttatctcaacctcttcaatttgagtattaacctttatatatagcatgtactagtgagccttgggttagccgtatttttagaaatataacattcctgcaagtaataaccgaactaagatatttgcatgacttgagggaagtaacaatgtggcttatcagataccatattcagtgttgtaaagctcctttgccagcccaggggagaagtgctgtaaagtagttcttcccttagagtcagtcctcagagctataagatgtcctactaacaagcatgttacatcatggtcatttctagtgtttcttatcctcttccatatgatatagctgtgccactatagcatgcttgagaatcctgatggggaagagtagaagagacatgaaataagtagaaataaaaagattttccgtttaacctgttgacaatcttctttgtgtggtagttttcctttcacatattatagttttattgacatcggctgcatagacttatagacattattcttcaaaattagagctctgtagactgacaagtgcatatttttagttgaatattctaatccatcaaggaattctttttggcatgattgcaggtacgtgattatattcatgtagttgatcttgctgaggggcatattgctgcactacggaagctgtttgaaagctcaataggtttgcacaatttactgctctctcaactcaaatttttatgggcaaattcttgcatgcaccccttgctatgtgtgtgcaatggttccccaaaacgagtctccggtgaattacagcactgtttagaactcaaatagtgttggatgctcagaactgtcactttgttttgatgttaaatcttttttctaaaatttatttctacttgcaggatgtcaagcatacaaccttggaacaggaaagggaacatcagtgttggaaatagttaatgcatttgagaaagtttctggaaaggtatgcctgatttgatatatttggacaagtgtacatgtttcttgcctgtccttttgacatgttatgttgtgctggttaccaaatttcctactcaattcttctgacctgttggtacgcaggcaatccttaggtttattcactactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgctaatgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagtatgttattgtaaaggcattactgcactagaggcctagggactacaaagttgtatgagttctcactaatgcctatgcatatgatacacgagtgcaatggattttttttcgttgtgctttcttttcttatccgtatgttcctctttttagaaaatacctttggttattggtccacgacgccctggtgatgctgagattctcttttcgtcagctgctaaagcagagagagaattcaagtggaagtaagttacacagtaacattgagaagatgatcattgattgtaaatttctagtttttctcatggtttagtgtcgatcttccttcagggcaaaatatggcatcgaagaaatgtgcagagaccaatggaactgggcgagcaagaatcctttcgggtacgcctcgcccgactccaccaagcagaatggtcattcacactgatcaacgccgattggtctgtgtgaactcagttgtacatgcaacgtagaactacaggtcgagatcgatgtagatctagtcggtcagtcatacagagaaagcttagaaaagatttgttctcttcttttggaccagtattggtataaatctacccttctgcatatagttcaaaattgttgtaggaacattgctatagtcagtcagctaattcaattctttttcttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0323000, RefSeq:Os09g0323000