BGIOSGA034876

From RiceWiki
Revision as of 08:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034876| Description = Putative uncharacterized proteincDNA, clone:| Definition = Oryza sativa Indica Group BGIOSGA034876, complete gene.| t...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA034876

Description

Putative uncharacterized proteincDNA, clone:

Definition

Oryza sativa Indica Group BGIOSGA034876, complete gene.

LocusTag

OS11G0167200

Ensembl Transcript ID

BGIOSGA034876-TA

Ensembl Protein ID

BGIOSGA034876-PA

Length

2797

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3064300..3067096

Sequence Coding Region

3064300..3064553,3064681..3064779,3065371..3065530,3065617..3065796,3065886..3066020
,3066623..3066705,3066803..3066896,3067010..3067096

Genome Context

<gbrowseImage1> name=IndicaChromosome11:3064300..3067096 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:3064300..3067096 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTAAGCCGCCGCCACCGCCTCATCGGCGTTGCCTCGCCGGCGGCGACCGAGCTCCGGCGAGCCTTCCGCTCGGAGGCGGCCCTCGAGGCCATCCGCGCGCACTCCAAGGACGCCGACGGCCCCGCGCACCTCGCGCTCTACAACTACCCCACCTTCGCCGGCGGCTACGCCGCACTCGCCGCCGACCTCTTCCACCGCCGCCTCCGCCGACGCCTCCTCGTGCTCCCCTTCTCCTCCGTCGAGCCCTTCAGAGCTGGAGACTTCGAGGGTGCGGGGTTCCAGACGTGCTACCTGTTGGATTTCATTGGGCCAAACAACTTCGCTTTGGAGCTCTCTCGATTCATCCCTAGTGTAATCGCATTTGATCACCGGCGAAGTACACTAGCAAGAATCCCCCATTTGGGTCATTGCCCAAGTAATCTTGAGCTTAACATTGACACAACAAAGAGCAGTGCTCGAGCTACATTTGATTATTTCTCCAGGAACCTTGCAGAGATAAAATCCGATTCTGATATGTGTGAGAAGCTGTTGGACCAAGAAGATGAGGAGAGGGTTTTTAATGTTCTCAAATACATAGAAGATGCTGACCTGCGCCAGTGGAAGCTGCCCAATGCTAAGGAATTTCAGACAGCACTCAGGGATGAGCGCGCTAAGTTGAACTGTATCACAAATCCTCTTGTATTTGAACAGCTGCAGCAACTTGATGTTTGCAATCTGCTTTCTAGGGGGAAGTCACTTGCTCACGATCGCTTCGAAGCTGCAGGGAAGTTAATACACAAGCCATTTAGGATTCATCTCGGAAGAGGATTGCACGGTGAATGCCTTGCGATCAGAGCAGACGGGAATTCAAAATTAAGCCATGAAATTGGCTTGGAGTTGAGCAAGATGAGTACTGCTGCTGGATTAAGACCTATCGGAGCAGTGGTCTTCATGCAACGTGGTCTCCTGAAGATCTGCTTGAGGACAACAGACAGTAGTACCAATACGGCAGAGATTGCTAAGGCATATGGTGGTGGTGGAAAACCAAGCTCAAGTTCGTTTGCGCTAAGAATGGACGAATTCAACGCTTGGATCTCTGTGAACTCATGA</cdnaseq>

Protein Sequence

<aaseq>MLSRRHRLIGVASPAATELRRAFRSEAALEAIRAHSKDADGPAHLALYNYPTFAGGYAALAADLFHRRLRRRLLVLPFSSVEPFRAGDFEGAGFQTCYLLDFIGPNNFALELSRFIPSVIAFDHRRSTLARIPHLGHCPSNLELNIDTTKSSARATFDYFSRNLAEIKSDSDMCEKLLDQEDEERVFNVLKYIEDADLRQWKLPNAKEFQTALRDERAKLNCITNPLVFEQLQQLDVCNLLSRGKSLAHDRFEAAGKLIHKPFRIHLGRGLHGECLAIRADGNSKLSHEIGLELSKMSTAAGLRPIGAVVFMQRGLLKICLRTTDSSTNTAEIAKAYGGGGKPSSSSFALRMDEFNAWISVNS</aaseq>

Gene Sequence

<dnaseqindica>1..254#382..480#1072..1231#1318..1497#1587..1721#2324..2406#2504..2597#2711..2797#ATGCTAAGCCGCCGCCACCGCCTCATCGGCGTTGCCTCGCCGGCGGCGACCGAGCTCCGGCGAGCCTTCCGCTCGGAGGCGGCCCTCGAGGCCATCCGCGCGCACTCCAAGGACGCCGACGGCCCCGCGCACCTCGCGCTCTACAACTACCCCACCTTCGCCGGCGGCTACGCCGCACTCGCCGCCGACCTCTTCCACCGCCGCCTCCGCCGACGCCTCCTCGTGCTCCCCTTCTCCTCCGTCGAGCCCTTCAGGTTTCCCCCCTCGCTTGTTCTTCCCCCCATTTTAATCGGCTCTTGCATACGTCTTTCCTTTCTTGATGTTGGTGTGTGTGTTCTTGAAATGGAAATTTCAAAATTGATCGATCGATCGATCGAGTAGAGCTGGAGACTTCGAGGGTGCGGGGTTCCAGACGTGCTACCTGTTGGATTTCATTGGGCCAAACAACTTCGCTTTGGAGCTCTCTCGATTCATCCCTAGGTGCGTGGACTAATTCCTTGCAGGAACAAGTTTGTGAGTTACAGAAGAAAACGAGATGATGAACAACTAAACAGTATTTTCTTTGATTTTCAGTGGTTGATGAAACATAAATAATCTGTTTTAGATTTTTGTTTGCCGACAAATATGCTTTATGGGATGATTCGAGTATGAAAAAGCAAGTAGCTTTTGTATGGAGGAAAGAAAAGGAAGGAACAAAATCTAGTGTATCCTTACTACAATCTTTGCACACACAAATGGCACAATGATGAGAACATTTCATGAAGTCTGTTGATTATGTTTTGAGTTTTTTAGTGCCTATGTAACTGAGAAGTTGCTTTAGGCACCATTTGACCATTATACCTGTGTATGTTAGTAGTAGTATTTACTGGAGTTACTAACTAATTTTACACACCAAAGTTACTTATATATGATAATATTTCCAGTCATGACAATGTCCCCCTGAAATTTCTTTTTTTCTTACACTGAAATTCTTTTGTTGAAGAAACTTTTGATGATCAGAAGTATAATTTATGAGAGCTTATGAACAATCCAGTGCTTGTATATATCCTTCTGACATTGCAATTGATGCAGTGTAATCGCATTTGATCACCGGCGAAGTACACTAGCAAGAATCCCCCATTTGGGTCATTGCCCAAGTAATCTTGAGCTTAACATTGACACAACAAAGAGCAGTGCTCGAGCTACATTTGATTATTTCTCCAGGAACCTTGCAGAGATAAAATCCGATTCTGTGAGTTGGGAATATTTTATATTCCAGTTCATTATCTGGTGTCATTTGAGGGAAAAAGGAAAATGGGTCTGTTCTCTTTTCCACAGGATATGTGTGAGAAGCTGTTGGACCAAGAAGATGAGGAGAGGGTTTTTAATGTTCTCAAATACATAGAAGATGCTGACCTGCGCCAGTGGAAGCTGCCCAATGCTAAGGAATTTCAGACAGCACTCAGGGATGAGCGCGCTAAGTTGAACTGTATCACAAATCCTCTTGTATTTGAACAGGTAAAGATCTAAACGTTGCTGTCATACTTACCGTTCCTTAACTTTACCCCTTACATGGTGAATGACTGCATTAATGGTACCTCGAACAGCTGCAGCAACTTGATGTTTGCAATCTGCTTTCTAGGGGGAAGTCACTTGCTCACGATCGCTTCGAAGCTGCAGGGAAGTTAATACACAAGCCATTTAGGATTCATCTCGGAAGAGGATTGCACGGTGAATGCCTTGTAAGTTAACAGGATGCTCTTGCACTCATACTGCTTTCAATCATTTGTGTATTATATAACATTTGGTAGCTTCATAGCACCCTCCTTTTTGTTTGCTGAAGCCTTCTGATTGGGCTACTTTAGAAAAAGCATGCAGTCTGCAGCAAGAAATGCTCTTGCAGTAATGATTTTAGTTACTGGACATAAGCATCTGTTGTTCAAAGTCGAATGCTGTAACTCATTCTTTTCTTCTTTGTTTAGTTGACTGCAGCACCTATCAATAGTTCAAATGGACAGATGAACAGCCTATTTTCCTAGCTGATATCAGTCATGAATCCTGAGTAGCCATTCTATGTTCAAATTACATATGTTCATGCTTAAATGGTTAACAATATGTGTTAATGGATTCTCATGTTCCTGAAGTATTATTGTAACCTTGTTTTGATTCTTGAACACGACCAAGCATCAGTCTTGTTCTAAATCATTTGGCTAGTAAAGCAATATCCATAGTGTTTTGGTGGCCATGTACAATTTTACTCTGAATGTTATTTTGTGGAACAATATATAATTCGCACAAAAAGATGCATCATTATCTGTATTAAAAAAAATTTCCATGCTATTAGGCGATCAGAGCAGACGGGAATTCAAAATTAAGCCATGAAATTGGCTTGGAGTTGAGCAAGATGAGTACTGCTGCTGGATTAAGGTATAAGCTTTGTTCAAGTTTCAAAGCACATGAACCCATATGCATACTTCACTTTGATCCTTTAATTGTATCGAAGAACTCTCCTTTTCTTTCATAGACCTATCGGAGCAGTGGTCTTCATGCAACGTGGTCTCCTGAAGATCTGCTTGAGGACAACAGACAGTAGTACCAATACGGCAGAGATTGCTAAGGTATGCTGTCTTTAATGATTGTTTGATTATTTCATAATCCTGAATTGCCTTAAAGTTTGATTGTATTTTAATTGTTCATATATTGCTTTCATCATTAAAAAAAATTATGTTAGGCATATGGTGGTGGTGGAAAACCAAGCTCAAGTTCGTTTGCGCTAAGAATGGACGAATTCAACGCTTGGATCTCTGTGAACTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034876