BGIOSGA034877

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Revision as of 08:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034877| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034877, complete gene.| tag = OsI_352...")
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Gene Name

BGIOSGA034877

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034877, complete gene.

LocusTag

OsI_35253

Ensembl Transcript ID

BGIOSGA034877-TA

Ensembl Protein ID

BGIOSGA034877-PA

Length

4262

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3074336..3078597

Sequence Coding Region

3074336..3074403,3074615..3074700,3075000..3075154,3075267..3075295,3075439..3075622
,3076045..3076308,3076401..3076484,3076987..3077244,3077474..3077732
,3077810..3078015,3078156..3078206,3078301..3078597

Genome Context

<gbrowseImage1> name=IndicaChromosome11:3074336..3078597 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:3074336..3078597 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGACGGCGCACGAGGTGGCCATTTACATCGACCGCTTCCACAACCTCGACCTGTTCCAGCAAGGATGGTACCGGCTGAAGATTAGTGCGGCGTGGGAGGAGGATGAGTACAGGGCGCCCGTATCTCCTGCCAGGGTCGTGCAATATGAAGTTCCTGATATTGGTTCGAAGGGAGCATTTGGCCTTTGGAAAATAGATGACGTTGACAATAGCTTCTATACACAACCATTCCAGATTAAATATTCTAGACAAGATATTTATCTATCAGTTATGGTGTCTTTCTACATACCCAACACCGAAGATGAGCTCATCTATGTTCCAACATTGGAAGACAGGACTGAGATTGAAGATCCAAGTGACATATATGTCCCAGTGCATGAATTTAGAATCCCATACAAAGCACTCCTGGGTTTACACGCATATTTTCCTGTCCATTTTGATGCTTTCCACCCTGTGCTTGTTGATCTAACAATGCATATCGTGTACCTAAAAGCTGGTGTGACCAAATCGTCTCAGAAGGCATCTGAGCAAGGTTTATGCTCAAAATCATGTTATATTATAAAAGCACTATTAAGTTCTAGAGAAATTTTGCTTGAGGAAGTGATGAAGATGAGTGCTGGCATTGGTAAAACTCTTGAAGATTTAGATGATGCTGATTTAACTCTTGGTAAACATGAGCCGATCGATTCATCAAAGGCAGGCTTGCCTAAATATAGCAAAGGGCTCTATATACCCACGAAGTGCTTTGGCCATCTTACTGGTGTTTTACATGATCTAATAGAGAGATCTGATAATGTGGTTCGGAGCACTAATGACATTCTGCTGTACACCCTTTCCAAGGAAGATTTGTTAGAATTATTTCAAGCTCCTGTACAGAATTCTTCTTCACGGGCAGAACTCCATAGGAGAAGTATTGCACAAATGAAGGTCGGTAGTCAGTCAATGTTGAAAACTGAAACAATTTGCATTACTCCAAAGAAAAGGATACTGACACAAATCATTCTGCAGATTAATGCACGGTTCATTCAAGATATGCAAATTTATGCTAATCCTTCAGAAATTCCTGTTGTTCACATAGAACAACATGTCATGGTTGTTCCACAACATGGTTCTAGCAAGCGTTTGGGACATCATTTGGATTTACGGCTTATTAGAAACCAATGGATACTGTGTGATCCTGGAGCTGAGTGCCTACTGTCTCAGACAAATGAAGACAGAACATGTGGAGATTTTAAGGAAATGGGCAGAAGGCTATCAAATGAGGTAGTTGCATTCCTCAAAAGGAAAATTGATAGGTATTCAAGAAATGGAGGCTGCAAAGATTTGAAGCTTAGCTTTGTTGGTCATTCCATTGGAAACATTATTATCAGAAGTGCCCTAGCAGACCCCAAGATGCAACCATTTCTGAAGAACCTCTACACATACATGTCAATATCTGGACCTCACTTAGGTTACTGGTACAGCTCAAATTCTCTGTTCAACTCTGGTCTGTGGCTTATGAAAAGGCTCAAGGGAGTCCAATGCATGCACCAGCTCACTTTCAGCGATGAACAAGATCCCCAGAACACATTTTTTTACAAGCTATGCAAGCTGAATACATTAGATAACTTCAAAAACATCATCTTGGTATCATCGCCACAGGATGGGTATGTTCCATATCATTCAGCAAGAATCGATTCCTGCCCTGCCTCATCGTCGGATAACTCGAAGAAAGGGCAGGTGTTCACCGAGATGCTCAACAACTGCCTGGACCAGCTCCGAGCCCCATCGTCGGAGACGCGGGTGTTCATGCGCTGCGACGTGAGCTTCGACCAGTCCTCCCATGGCCGTCGCCGGAGCCTCAACACCATGATCGGGAGAGCTGCTCACATCGAGTTCCTGGAGAATGATTTGTACGCCAGGTTCATCATGTGGTCCTTCCCTGATTTCTTCAGATGA</cdnaseq>

Protein Sequence

<aaseq>METAHEVAIYIDRFHNLDLFQQGWYRLKISAAWEEDEYRAPVSPARVVQYEVPDIGSKGAFGLWKIDDVDNSFYTQPFQIKYSRQDIYLSVMVSFYIPNTEDELIYVPTLEDRTEIEDPSDIYVPVHEFRIPYKALLGLHAYFPVHFDAFHPVLVDLTMHIVYLKAGVTKSSQKASEQGLCSKSCYIIKALLSSREILLEEVMKMSAGIGKTLEDLDDADLTLGKHEPIDSSKAGLPKYSKGLYIPTKCFGHLTGVLHDLIERSDNVVRSTNDILLYTLSKEDLLELFQAPVQNSSSRAELHRRSIAQMKVGSQSMLKTETICITPKKRILTQIILQINARFIQDMQIYANPSEIPVVHIEQHVMVVPQHGSSKRLGHHLDLRLIRNQWILCDPGAECLLSQTNEDRTCGDFKEMGRRLSNEVVAFLKRKIDRYSRNGGCKDLKLSFVGHSIGNIIIRSALADPKMQPFLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLMKRLKGVQCMHQLTFSDEQDPQNTFFYKLCKLNTLDNFKNIILVSSPQDGYVPYHSARIDSCPASSSDNSKKGQVFTEMLNNCLDQLRAPSSETRVFMRCDVSFDQSSHGRRRSLNTMIGRAAHIEFLENDLYARFIMWSFPDFFR</aaseq>

Gene Sequence

<dnaseqindica>1..68#280..365#665..819#932..960#1104..1287#1710..1973#2066..2149#2652..2909#3139..3397#3475..3680#3821..3871#3966..4262#ATGGAGACGGCGCACGAGGTGGCCATTTACATCGACCGCTTCCACAACCTCGACCTGTTCCAGCAAGGGTAAGGAACGAACGGCAGAAATTTTACCTTTCTTGCTGATGATTCTACCAGGATGAATTTGGGCTTTGGAAATTTAGACTTGAACCTAATTATTCTGTACGATTTTGATTGTTCTGTCTGTTTATGAATCTGATGAAAATCTATCTCTGAATTGCAATTTTGATTCAGTTTCATCGAGGTGTATGTGATTGTGTTTGCTATTTGGGTGCAGATGGTACCGGCTGAAGATTAGTGCGGCGTGGGAGGAGGATGAGTACAGGGCGCCCGTATCTCCTGCCAGGGTCGTGCAATATGAAGGTTTGTGCATTTCTTGTACCTATTCTGTGATGGCAATATGTGATATGTGCTATATATTTTGCACGTTTGCTCATCAATCATGTACTTGTACCTATAATTTAAGATCTGTTGTTGATTAGTTTGGTTTGAACTAAAACCAATTCAAGATGCATCAGAGCTGTCTTGTTGGCAATTACAATCAATTGTGTTAGGTTGGATTTTTCATGTTCTTGTTTTTCTTTCTTTTTCTGTTGTATAGTATCATCTTGAACCGTCAATCTTTGGCTAATACATAATGACATGCTAGGTGGATTGTGCAGTTCCTGATATTGGTTCGAAGGGAGCATTTGGCCTTTGGAAAATAGATGACGTTGACAATAGCTTCTATACACAACCATTCCAGATTAAATATTCTAGACAAGATATTTATCTATCAGTTATGGTGTCTTTCTACATACCCAACACCGAAGATGAGGTTAGCTTAACTTTCTTTTCCTAACTGAATTATGTTTACAATGGCTGGTCTGAACTTCTGCTTTCTCCATTCCAGGGGCCCAGCAACCTCGTCTGTAATATTAAAATTTGAGCTCATCTATGTTCCAACATTGGAAGACAGGTATGTTCTTTGCTTTCCCTTTCCATCTTATTTTGGTGTTCACATTATATTGTTCGTTTTGGGGAGTACTTGTGTGCCTACAAAATCAACATCCATTCATCAGTACTGAAGCTGCTTCCATTTTTTTTAAAAAAATATTGTAGGACTGAGATTGAAGATCCAAGTGACATATATGTCCCAGTGCATGAATTTAGAATCCCATACAAAGCACTCCTGGGTTTACACGCATATTTTCCTGTCCATTTTGATGCTTTCCACCCTGTGCTTGTTGATCTAACAATGCATATCGTGTACCTAAAAGCTGGTGTGACCAAATCGTCTCAGAAGGTACACAGGTTTGTGATACTTTAGCTTTAATATTCTTTTAGACACTGCCATACTGGTGACCTTACAAAAAAGCTTGTCTGAGAGACTGAGATTGCTAGAACATTTGATAAATTTGGCAACATTATAGGGTGCTGAGCATATACTACCTCCTTTTTTAATATATGATGCCGTTGACTTTTTGACAAATATTCGACCATTCGTCTTATTCAATTTTTTTTGTGCGAATATGAAAAAAAAAAGACATCCTTAAAGAACATGTGATAATAAATCAAATCACAATAAAATATATGATAATTACATAAATTTTTTGAATAAGACGAATGGTCAAACTTATCTAAAAAGTCAACGACTTCATATATTAAAAAATAATGACCTGAACATGTTGCCTTCATTTATTATCCCTAAAAGCTGCCAATATGCAGGCATCTGAGCAAGGTTTATGCTCAAAATCATGTTATATTATAAAAGCACTATTAAGTTCTAGAGAAATTTTGCTTGAGGAAGTGATGAAGATGAGTGCTGGCATTGGTAAAACTCTTGAAGATTTAGATGATGCTGATTTAACTCTTGGTAAACATGAGCCGATCGATTCATCAAAGGCAGGCTTGCCTAAATATAGCAAAGGGCTCTATATACCCACGAAGTGCTTTGGCCATCTTACTGGTGTTTTACATGATCTAATAGAGGTACACTTGATTTGGTCTCTCAAAAGTGACAATTTTTGTCACATATGATACTTTTACTAACTGTTTACGATTCTTTTTACAACTAATTCCAGAGATCTGATAATGTGGTTCGGAGCACTAATGACATTCTGCTGTACACCCTTTCCAAGGAAGATTTGTTAGAATTATTTCAAGCTGTGAGCGATCAAGTTTCATTTTTATGGAATGCATTCTTGAAATTTCATAGGTGAGGTTATCTGTGGTTTTTTTATTTTGTCTTAGAATCAAGATAGCCATTGGCTACTTCTCTAATGTGTTGGTGTAATGATTTGTTAATTACTGTTCTTATTCTTTCATTTTATTTTCTGTCCGACCAAAGTCTTGAGATTTACTGCAGGGCAAACAAAATCAAGATATTGGATCACTTGCGCAATATTTGGGATGCTGACCGAAAATCAGAATGGTCAATATGGATTGTTCATTCAAAAGTTGACATGCCACATCGTTATTTGTGCAGTTTGAGTAGCAAGTCTTCTCCTCGCCATTCACTTCTGAGGAGTTCCAGTTCAAGAAAGTTGCATCCTGATGTAATTGTCTTGTCTTGATGCTTACAGTGAACTATCTGCCCTTTTCTTACCATCTCTTTTATTAATTAGTAGCATTTTCCTGTCAAGTTTTGATGGTTCCATATATTTGTAGCCTGTACAGAATTCTTCTTCACGGGCAGAACTCCATAGGAGAAGTATTGCACAAATGAAGGTCGGTAGTCAGTCAATGTTGAAAACTGAAACAATTTGCATTACTCCAAAGAAAAGGATACTGACACAAATCATTCTGCAGATTAATGCACGGTTCATTCAAGATATGCAAATTTATGCTAATCCTTCAGAAATTCCTGTTGTTCACATAGAACAACATGTCATGGTTGTTCCACAACATGGTTCTAGCAAGCGTTTGGTGAGAAGTGCTTCAGAGGCAAACAGTACTACTCTACAGCATAAGCTAAATGGTAAACATGTGGCAAGAATGCCTAGCTGTGATGGAAATATTGGGCATATATTACGAGCAGTCGTTTTTGTGCATGGATTTCAGGCAAGTGTCTTCAGACTTGTAGCGATGGTTTTCATCTCATATATTATGTTGATGAAACACTGAAAACTTCTTCTATTCACTCGAATGAAAGCAGGGACATCATTTGGATTTACGGCTTATTAGAAACCAATGGATACTGTGTGATCCTGGAGCTGAGTGCCTACTGTCTCAGACAAATGAAGACAGAACATGTGGAGATTTTAAGGAAATGGGCAGAAGGCTATCAAATGAGGTAGTTGCATTCCTCAAAAGGAAAATTGATAGGTATTCAAGAAATGGAGGCTGCAAAGATTTGAAGCTTAGCTTTGTTGGTCATTCCATTGGAAACATTATTATCAGAAGTGCCCTAGCAGGTAGTTTTTCCAACTTTACTTCCAAATATGTAGCTGGCTCTGTCTGACTAACTAACCAGTTCTTTTCCATTCAACAGACCCCAAGATGCAACCATTTCTGAAGAACCTCTACACATACATGTCAATATCTGGACCTCACTTAGGTTACTGGTACAGCTCAAATTCTCTGTTCAACTCTGGTCTGTGGCTTATGAAAAGGCTCAAGGGAGTCCAATGCATGCACCAGCTCACTTTCAGCGATGAACAAGATCCCCAGAACACATTTTTTTACAAGCTATGCAAGGTAGATCTACTCTATGTCCCTTCAGTAACAAAACTCAACTATAAGAATTAATTTCCCCAAAATTAGAGCTGAACTAGGAATCACAGGGTAATTAACCTGTATGAACTCAACTTCTTATATATATTTTTTAATCTTCGCAGCTGAATACATTAGATAACTTCAAAAACATCATCTTGGTATCATCGCCACAGGTACCTTCTTGCTCAAAATATTCCTTTCAAATGTATGCTGATTATCTGACATGTATATTTTCCTAATCAAATAACTCTGCTTAACTAACTGTAGGATGGGTATGTTCCATATCATTCAGCAAGAATCGATTCCTGCCCTGCCTCATCGTCGGATAACTCGAAGAAAGGGCAGGTGTTCACCGAGATGCTCAACAACTGCCTGGACCAGCTCCGAGCCCCATCGTCGGAGACGCGGGTGTTCATGCGCTGCGACGTGAGCTTCGACCAGTCCTCCCATGGCCGTCGCCGGAGCCTCAACACCATGATCGGGAGAGCTGCTCACATCGAGTTCCTGGAGAATGATTTGTACGCCAGGTTCATCATGTGGTCCTTCCCTGATTTCTTCAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034877