BGIOSGA034886

From RiceWiki
Revision as of 08:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034886| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034886, complete gene.| tag = OsI_352...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA034886

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034886, complete gene.

LocusTag

OsI_35276

Ensembl Transcript ID

BGIOSGA034886-TA

Ensembl Protein ID

BGIOSGA034886-PA

Length

2495

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3236557..3239051

Sequence Coding Region

3236557..3237244,3237331..3237724,3238202..3239051

Genome Context

<gbrowseImage1> name=IndicaChromosome11:3236557..3239051 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:3236557..3239051 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCGTCGTCCTCCCATCAAGGTACTGTGGCGAACGCCTTCTTCAAGGTGTGGGCCGTCCTCATCGTCACCATGCAGGACAGCATCCGCATCGGCCGGCCGTACCAGCCCAAGGAGATGACCCTCGTCGACATGCTCACCTCGCTGTGGTCGGCCAACCAGCTTCGGGCGAAGACGGCGATACACCTCAGGGTGCCTCTCTGGCTCATGTGGTCCATCCACGCCTCACGCATCGTCTGGTACTACATCACCTCCAGCGCGGCTGCCAGAGCTAGAGATGATGACATGAAGCTTGTCAGTGACTACATGGCGATGCCGACGCAGCACACGTCCAACGATGCCAACCCGGCCACCATGGCGGGGTACAAGTACATCGTTCTCGGGGAGGAGAAGCTGAAGCAGCAGATAAAGGTCGAACCACCCAGCTTCACACAGACGCAACTTGCGCAGGAGGAGGTCATCACTGTGGAGAAGGTCTGGAGCCAAGGGAGCAGCGATGCCCTGCTCGGTGAGGCCGGCGACAGCAGCAACCGGTTCAAGGACGTGTGCCTCTCCTTCGCCCTGTACAAGCTGCTGCGCCGTCGGTTCTTCAACTTCCCCATACATGAGGCCAGCCATGCAGGCACCCGGCAGCTCGTTGTGGACGCCATCCTAGATGACAAGAACGGCTACGAGAGGGCGTTCCCAGCTGCCTCATACCTGGCCTACGCAGTGCATGATATGCCTAGTGTTAGCACAGGCCTCACTGCCAAGGGCCGCCTCGCTAGGATCAGCCATGGAGTGTTCGTCACCCACTGCATCATCGCCATACTTGTCATTAGAGAGCTCTGGGAGATTATCGTGTACGTCTTCTCGCAGTGGACCAATGTCTTGATCATCTGCAGCTACATCAGGTTGCGAGGACGTCAAGGCTGCTGGATCCAGGGGCTGCGGCTTTGGATGATGGAGAAGGTGGCGAGGATCATGTTCTGGCTCATCGGGAGGGGACGAAGCCGACGGGACCGCAATATTCGCCAGTGCAACCTAGTGATGTCGGCTCGGACTGGAAGCATAGCCTGCGTTACAAGAGTTATCTTTAGAACAAAGAAGCTGCGGAGGGAGGTGAAGATGGAACTGTTTTCGTCAATCAAGGCCCTCCTGAATTCTCAAGAGGTGGCGGCTGGAAGGACGAGGAGTTCACCAGAGGAGTTGGCGCAGAAAAAGAACGAGCTATTGCGGTCTTACCTTGGGAATGCCTTCGCCGACATCGAACACCTTGTCGGTCAGATCGAGCATATCCAAAGAGAGATCGAGGGCGAGGGCGAGACCCACAAGATTCTAGCCTGGCACATCGCCACCAGCCTCTGCCAGATCAAACTACTGGAACAACAAGCCACCGGTCGCTGGCGAGACGACCTGTATAACCTCACTCTGCCCGAGGGCGGTGGTGTGTGGCCGCATTATGTCACCGCCGTCACCCTGTCCAACTACTGTGCGTACCTGGTCAGGCAGGCACTGGTGCCGGACAATGGCCTCGTCGCCTACAAGGTCCTCCATGAAGTGAGGAGGGAGGCCGCACAATCCATGCGCGGGTGCAGCGCGATGCAAGGGCTTCCGCATCAGCTCATCCTAAACTCCAACAGGCCGCGGTGCAATGGGGACGACGGTGAGGAGGGCATCATTGACATTGCCGCGCTGCTATCGGAGGAGCTCGTGGCGGCGTTCGGTGGCGGCGCCGAGGTCGAGCTGTGGAAGAGGCTGGGCAAGTTCTGGGCGGGTTTCCTGCTGCACCTGTCGGCATCGACGAGGGCGGCGAAGCATCAGGTGCACCTGCGCGGGAGCGGGGAGCTCACCACGCACTTGTGGGTGCTCCTTTCGCACGCCGGCTTCCTTGGTGAGACCAGCCATGGCGATCAAATGCTCGACCCGGCTGACCTCTCCAACTCCTAA</cdnaseq>

Protein Sequence

<aaseq>MPPSSSHQGTVANAFFKVWAVLIVTMQDSIRIGRPYQPKEMTLVDMLTSLWSANQLRAKTAIHLRVPLWLMWSIHASRIVWYYITSSAAARARDDDMKLVSDYMAMPTQHTSNDANPATMAGYKYIVLGEEKLKQQIKVEPPSFTQTQLAQEEVITVEKVWSQGSSDALLGEAGDSSNRFKDVCLSFALYKLLRRRFFNFPIHEASHAGTRQLVVDAILDDKNGYERAFPAASYLAYAVHDMPSVSTGLTAKGRLARISHGVFVTHCIIAILVIRELWEIIVYVFSQWTNVLIICSYIRLRGRQGCWIQGLRLWMMEKVARIMFWLIGRGRSRRDRNIRQCNLVMSARTGSIACVTRVIFRTKKLRREVKMELFSSIKALLNSQEVAAGRTRSSPEELAQKKNELLRSYLGNAFADIEHLVGQIEHIQREIEGEGETHKILAWHIATSLCQIKLLEQQATGRWRDDLYNLTLPEGGGVWPHYVTAVTLSNYCAYLVRQALVPDNGLVAYKVLHEVRREAAQSMRGCSAMQGLPHQLILNSNRPRCNGDDGEEGIIDIAALLSEELVAAFGGGAEVELWKRLGKFWAGFLLHLSASTRAAKHQVHLRGSGELTTHLWVLLSHAGFLGETSHGDQMLDPADLSNS</aaseq>

Gene Sequence

<dnaseqindica>1..688#775..1168#1646..2495#ATGCCGCCGTCGTCCTCCCATCAAGGTACTGTGGCGAACGCCTTCTTCAAGGTGTGGGCCGTCCTCATCGTCACCATGCAGGACAGCATCCGCATCGGCCGGCCGTACCAGCCCAAGGAGATGACCCTCGTCGACATGCTCACCTCGCTGTGGTCGGCCAACCAGCTTCGGGCGAAGACGGCGATACACCTCAGGGTGCCTCTCTGGCTCATGTGGTCCATCCACGCCTCACGCATCGTCTGGTACTACATCACCTCCAGCGCGGCTGCCAGAGCTAGAGATGATGACATGAAGCTTGTCAGTGACTACATGGCGATGCCGACGCAGCACACGTCCAACGATGCCAACCCGGCCACCATGGCGGGGTACAAGTACATCGTTCTCGGGGAGGAGAAGCTGAAGCAGCAGATAAAGGTCGAACCACCCAGCTTCACACAGACGCAACTTGCGCAGGAGGAGGTCATCACTGTGGAGAAGGTCTGGAGCCAAGGGAGCAGCGATGCCCTGCTCGGTGAGGCCGGCGACAGCAGCAACCGGTTCAAGGACGTGTGCCTCTCCTTCGCCCTGTACAAGCTGCTGCGCCGTCGGTTCTTCAACTTCCCCATACATGAGGCCAGCCATGCAGGCACCCGGCAGCTCGTTGTGGACGCCATCCTAGATGACAAGAACGGCTACGAGAGGGCGTTCCGTGTGACTTCTTCTACAGCAAGCACGCTGATGTCTTCGCCAGTGGCTTCCCTTGCGTGAGGTTGCTGCTATCGCTGCTGATGACAGCAGCTGCCTCATACCTGGCCTACGCAGTGCATGATATGCCTAGTGTTAGCACAGGCCTCACTGCCAAGGGCCGCCTCGCTAGGATCAGCCATGGAGTGTTCGTCACCCACTGCATCATCGCCATACTTGTCATTAGAGAGCTCTGGGAGATTATCGTGTACGTCTTCTCGCAGTGGACCAATGTCTTGATCATCTGCAGCTACATCAGGTTGCGAGGACGTCAAGGCTGCTGGATCCAGGGGCTGCGGCTTTGGATGATGGAGAAGGTGGCGAGGATCATGTTCTGGCTCATCGGGAGGGGACGAAGCCGACGGGACCGCAATATTCGCCAGTGCAACCTAGTGATGTCGGCTCGGACTGGAAGCATAGCCTGCGTTACAAGAGTTATCTTTAGGTAAACAATTTATCGATCTCTTCTAAATAAATTGAATCCATTTTCGTTATTCATCAGTGCACTGAGAAGAGTTCCCCTAAAATCTTAGTTGACCAATGAATATAATGTGGATCAAGATCCACGGCATAGCAACCGTCTTCTACCTGAATTGAGCATGAGGGAGGGAGACGGTGAGAATGGTGGTGTGTTGGGTTGTGGGCCTCAACGATGCTGACAAGGGAAAGGATGGTGGTGCGTTGGGTTGGGGAGCAGTATAAGCGGGTTGGGTCATGTAGGCAAGGGAGAGGGAGAGGGTCGGAGGTTTGCACCATTGTATTGAAAAGAGTGTGTCGAACTTTTAAAAATCAGTTAATTGATGAATAGATGACCCCTTTATTAGTCATCAACCACCATGCTATTTTGATCATGATTATCAACGGATGACCAATTTGTAGTTCTCCTATATAATTCAAATCAATTTTTCACCTTGGCATACAGAACAAAGAAGCTGCGGAGGGAGGTGAAGATGGAACTGTTTTCGTCAATCAAGGCCCTCCTGAATTCTCAAGAGGTGGCGGCTGGAAGGACGAGGAGTTCACCAGAGGAGTTGGCGCAGAAAAAGAACGAGCTATTGCGGTCTTACCTTGGGAATGCCTTCGCCGACATCGAACACCTTGTCGGTCAGATCGAGCATATCCAAAGAGAGATCGAGGGCGAGGGCGAGACCCACAAGATTCTAGCCTGGCACATCGCCACCAGCCTCTGCCAGATCAAACTACTGGAACAACAAGCCACCGGTCGCTGGCGAGACGACCTGTATAACCTCACTCTGCCCGAGGGCGGTGGTGTGTGGCCGCATTATGTCACCGCCGTCACCCTGTCCAACTACTGTGCGTACCTGGTCAGGCAGGCACTGGTGCCGGACAATGGCCTCGTCGCCTACAAGGTCCTCCATGAAGTGAGGAGGGAGGCCGCACAATCCATGCGCGGGTGCAGCGCGATGCAAGGGCTTCCGCATCAGCTCATCCTAAACTCCAACAGGCCGCGGTGCAATGGGGACGACGGTGAGGAGGGCATCATTGACATTGCCGCGCTGCTATCGGAGGAGCTCGTGGCGGCGTTCGGTGGCGGCGCCGAGGTCGAGCTGTGGAAGAGGCTGGGCAAGTTCTGGGCGGGTTTCCTGCTGCACCTGTCGGCATCGACGAGGGCGGCGAAGCATCAGGTGCACCTGCGCGGGAGCGGGGAGCTCACCACGCACTTGTGGGTGCTCCTTTCGCACGCCGGCTTCCTTGGTGAGACCAGCCATGGCGATCAAATGCTCGACCCGGCTGACCTCTCCAACTCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034886