BGIOSGA034889

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Revision as of 08:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034889| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034889, complete gene.| tag = OsI_352...")
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Gene Name

BGIOSGA034889

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034889, complete gene.

LocusTag

OsI_35284

Ensembl Transcript ID

BGIOSGA034889-TA

Ensembl Protein ID

BGIOSGA034889-PA

Length

3886

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3287485..3291370

Sequence Coding Region

3287485..3287523,3287842..3288055,3288272..3290902,3291003..3291370

Genome Context

<gbrowseImage1> name=IndicaChromosome11:3287485..3291370 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:3287485..3291370 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACGAAGCTGGCTGCAGGCTGCACCCTCTCGCTGGTCTCTGACACTAGAGACTTTTATTTTCCACCGATTGGTGATCATTTATCTTGCTATAAGCCTTTATGTTTCATCCCTGACTCTTCTGTCTCAATGGCAGTTGGATTGATCAGCCCGTATCAGCAAGGATTTTTCATGTTGGTGAATCTTGCCAGAGGAAAGGATATCAATTCTGTCTGTGGAGACGAAGTAAATAAGAACATAAGCTTTCTTGCGAGCTGTCCTGTCCAAATCTTCTGCAGTTCGTCGTATGGAAACGAGACAGATAAGCTCTCACTGCTTGAGTTCAAAAAGGCAATCAGTCTTGATCCCCAGCAAGCCCTAATTTCTTGGAATGACACCAATCACTTTTGCAGCTGGGAAGGAGTTTTGTGCAGGAAGAAGACACCCCTTCGTGTCATTTCTCTTGACCTTAGCAAACGAGGTTTAGTTGGACAAATCTCCCCTTCACTTGCAAACCTAACATTCCTAAAATTTCTTTACCTAGACACAAATTCATTCACAGGAGAGATTCCTCTATCCCTTGGTCACCTGCATCACCTCCAAACCCTCTACTTGAGCAACAACACATTCAAAGGAAGGGTACCTGATTTTACAAACAGTTCCAACCTCAAGATGCTACTCCTCAATGGCAATCACCTTGTTGGACAATTGAATAATAATGTCCCCCCTCATCTTCAAGGGCTGGAACTTTCATTCAATAATCTCACTGGAACCATCCCTTCTTCTCTTGCCAATATCACAGGACTAAGATTACTTAGTTTCATGTCAAACAATATCAAGGGAAACATCCCAAATGAGTTTTCAAAGTTCGTCACGATGGAGTTTCTTGCTGTGAGTGGAAACATGTTGTCAGGAAGGTTTCCACAAGCCATCTTAAATATCTCTACTCTCACTAATCTTTACCTTACTTTGAATCATCTAAGTGGAGAGGTACCATCAGATCTCCTTGACTCTCTACCTAATCTACAAAAACTTCTACTGGGCCACAATTTATTTCGAGGACATATCCCTCGCTCATTGGGAAATACTTCCAACCTACATTTGCTGGACATATCAAATAACAATTTCACCGGCATTGTACCAAGTTCCATTGGCAAACTAACCAAATTGTCTTGGTTAAATACTGAATTCAATCAACTCCAGGCACACAAAAAGGAAGATTGGGAGTTTATGAACAGTTTAGCCAATTGCTCTAGACTACATGTTCTATCGATGGGAAATAACCGTCTAGAAGGCCATCTACCAAGTTCGTTAGGGAACTTATCCGCCCATCTGCGACAGCTTATTTTCTCAGGAAATCAGATATCAGGAATTTTTCCTTCCGGTGTAGAACACCTCTCCGACTTGAATTCTTTAGGACTAGATGATAATGAATTAACAGGTTCCCTTCCTGAATGGCTTGGGAATCTTAAAAAGTTACAAAAGTTAACCTTGCAAAACAACAATTTCACAGGGTTTATTCCGTCATCTGTTTCGAATCTGTCTCAACTAGCAGTTCTCGGACTATATTCTAACAAGTTGGAAGGGCACATACCAAGCTTGGTAAACCTGCAAATGCTTCAACTACTACTCATTTCCAGCAATAATCTTCATGGCAGCATACCAAAAGAGATATTTAGTATTCCATCAATAATTGCAATTGATTTATCTTTCAACAACCTAGATGGGCAACTTCCTACTGAGATTGGCAATGCTAAACAACTCGTATCTTTGGGACTTTCATCCAACAAGTTGTTTGGAGATATTCCTAACAGTTTGGTAAGTTGTGAAAGTTTGGAATACATCGCGTTTGACTCTAATATTCTCAGCGGAGGCATCCCCACTTCATTAGGAAGCATAGGTGGCTTGACAGCTATAGATTTTTCTCACAATAATTTAACTGGTTCAATACCAGGTTCTCTTGGCAATTTGCAATTTCTTGAGCAACTAGATTTGTCATTCAACCATCTTAAGGGTGAGATTCCCACGAAAGGAATTTTCAAGAATGCAACAGCTTTCAGGATTGATGGAAATCAGGGCCTTTGTGGTGGGCCACCTGAGTTACACCTACAAGCATGTCCTATCATGGCTTTGGTTTCATCTAAGCACAAGAAATCAATAATACTGAAAGTAGTGATCCCAATAGCCAGCATTGTGTCAATTTCTATGGTCATACTTATTGTGCTTATGTGGAGAAGAAAACAAAACAGAAAATCTTTATCTTTGCCCTTGTTTGCTAGGCATTTGCCCCAAGTTTCATACAATATGCTTTTCAGAGCAACAGGGGGGTTCTCAACATCCAATTTGATAGGCAAAGGAAGATACAGTTATGTATATCGAGGAAAATTATTCGAAGATGATAATATGGTTGCTGTCAAAGTATTCAACCTAGAGACAAGGGGAGCACAAAAGAGCTTCATCGCAGAATGTAATACTTTGAGAAATGTTCGGCATCGCAACCTAGTTCCTATCCTAACTGCATGTGCAAGTATTGATTCAAAAGGAAATGATTTTAAGGCCTTGGTTTATGAGTTTATGGGACGAGGTGACTTGCATGCATTACTACACTCAACACAAAATGATGAAAACACTTCATATCTGAACCACATTACATTGGCTCAGAGGATAAGCATTGTGGTCGATGTATCTGATGCGTTGGAGTACCTGCACCATAACAACCAAGGAACTATTGTTCACTGTGATCTGAAGCCTAGCAACATACTTCTTGATGATGATATGATTGCTCATGTTGCAGACTTTGGACTTGCAAGATTCAAGACCGGTTCTTCAACACCATCTCTAGGTGATTCAAGCTCAACTTATTCCCTAGCAATAAAGGGAACCATTGGATATATCGCACCAGAATGCTCAGAGGGCGGTCAAGTTTCAACTGCCTCAGATGTATTCAGCTTTGGAGTTGTTCTCTTGGAACTATTTATTCGGAGAAGGCCAACACAAGACATGTTTATGGATGGATTGAGCATTGCAAAGCATGTAGAGATGAACTTCCCTGACAGGATACTAGAGATTGTTGATCCCCAGCTGCAACACGAGCTGGACCTTTGCCAAGAAACACCAATGGCAGTCAAGGAGAAAGGCATACACTGCCTGCGCAGTGTGCTAAATATTGGACTCTGCTGCACCAAGACAACACCGATTGAACGCATCAGCATGCAGGAGGTTGCTGCCAAGCTGCACGGAATCAAAGATTCATATCTCAGAGGAAACTAG</cdnaseq>

Protein Sequence

<aaseq>MATKLAAGCTLSLVSDTRDFYFPPIGDHLSCYKPLCFIPDSSVSMAVGLISPYQQGFFMLVNLARGKDINSVCGDEVNKNISFLASCPVQIFCSSSYGNETDKLSLLEFKKAISLDPQQALISWNDTNHFCSWEGVLCRKKTPLRVISLDLSKRGLVGQISPSLANLTFLKFLYLDTNSFTGEIPLSLGHLHHLQTLYLSNNTFKGRVPDFTNSSNLKMLLLNGNHLVGQLNNNVPPHLQGLELSFNNLTGTIPSSLANITGLRLLSFMSNNIKGNIPNEFSKFVTMEFLAVSGNMLSGRFPQAILNISTLTNLYLTLNHLSGEVPSDLLDSLPNLQKLLLGHNLFRGHIPRSLGNTSNLHLLDISNNNFTGIVPSSIGKLTKLSWLNTEFNQLQAHKKEDWEFMNSLANCSRLHVLSMGNNRLEGHLPSSLGNLSAHLRQLIFSGNQISGIFPSGVEHLSDLNSLGLDDNELTGSLPEWLGNLKKLQKLTLQNNNFTGFIPSSVSNLSQLAVLGLYSNKLEGHIPSLVNLQMLQLLLISSNNLHGSIPKEIFSIPSIIAIDLSFNNLDGQLPTEIGNAKQLVSLGLSSNKLFGDIPNSLVSCESLEYIAFDSNILSGGIPTSLGSIGGLTAIDFSHNNLTGSIPGSLGNLQFLEQLDLSFNHLKGEIPTKGIFKNATAFRIDGNQGLCGGPPELHLQACPIMALVSSKHKKSIILKVVIPIASIVSISMVILIVLMWRRKQNRKSLSLPLFARHLPQVSYNMLFRATGGFSTSNLIGKGRYSYVYRGKLFEDDNMVAVKVFNLETRGAQKSFIAECNTLRNVRHRNLVPILTACASIDSKGNDFKALVYEFMGRGDLHALLHSTQNDENTSYLNHITLAQRISIVVDVSDALEYLHHNNQGTIVHCDLKPSNILLDDDMIAHVADFGLARFKTGSSTPSLGDSSSTYSLAIKGTIGYIAPECSEGGQVSTASDVFSFGVVLLELFIRRRPTQDMFMDGLSIAKHVEMNFPDRILEIVDPQLQHELDLCQETPMAVKEKGIHCLRSVLNIGLCCTKTTPIERISMQEVAAKLHGIKDSYLRGN</aaseq>

Gene Sequence

<dnaseqindica>1..39#358..571#788..3418#3519..3886#ATGGCCACGAAGCTGGCTGCAGGCTGCACCCTCTCGCTGGTAACCCCTCACGAATGCATATATTGATTGATCTTTTAATTTGTTTCTATGTTCATCATTTTGTTAGTTCCATGGAATAGTATATAAATGTTGGATCAATCGTCTGCTTTTGGGGATTGTATGGAATGAGCCTAACTATACCTACAGGCTTGTTTCTGTCTGAAAACTTATTGCTTTCTAGATACAGATGATTAGAAACACTATATTTCCCTTTTTTGGTGAGATTGTCAGAAATTATTACTTCTGTGTTACCTAGAACTTATTTGTTCAGAATATCAGATAGCTTTGCTAGCTTTCTGGCTTTCGTCCTCCTTTTAGGTCTCTGACACTAGAGACTTTTATTTTCCACCGATTGGTGATCATTTATCTTGCTATAAGCCTTTATGTTTCATCCCTGACTCTTCTGTCTCAATGGCAGTTGGATTGATCAGCCCGTATCAGCAAGGATTTTTCATGTTGGTGAATCTTGCCAGAGGAAAGGATATCAATTCTGTCTGTGGAGACGAAGTAAATAAGAACATAAGCTTTCTTGGTACCTTACATTTGTCTATTTGCCAACATTCTCTAACCATCTAAAACAGCTTCTGAAATTTTAGGCTCTTGCATGTTCTTTAAAAAGGATTACTAACCGATATGTATTAATCCCTTTCTCTTTTGCCTATGCATATAAGCAAGACCTAAATTTATTCGACCAAGGAGCTGGTCATGAAGATCACTGCAATTGGGTTGTTTTTGTTGGTGCTTATAGCGAGCTGTCCTGTCCAAATCTTCTGCAGTTCGTCGTATGGAAACGAGACAGATAAGCTCTCACTGCTTGAGTTCAAAAAGGCAATCAGTCTTGATCCCCAGCAAGCCCTAATTTCTTGGAATGACACCAATCACTTTTGCAGCTGGGAAGGAGTTTTGTGCAGGAAGAAGACACCCCTTCGTGTCATTTCTCTTGACCTTAGCAAACGAGGTTTAGTTGGACAAATCTCCCCTTCACTTGCAAACCTAACATTCCTAAAATTTCTTTACCTAGACACAAATTCATTCACAGGAGAGATTCCTCTATCCCTTGGTCACCTGCATCACCTCCAAACCCTCTACTTGAGCAACAACACATTCAAAGGAAGGGTACCTGATTTTACAAACAGTTCCAACCTCAAGATGCTACTCCTCAATGGCAATCACCTTGTTGGACAATTGAATAATAATGTCCCCCCTCATCTTCAAGGGCTGGAACTTTCATTCAATAATCTCACTGGAACCATCCCTTCTTCTCTTGCCAATATCACAGGACTAAGATTACTTAGTTTCATGTCAAACAATATCAAGGGAAACATCCCAAATGAGTTTTCAAAGTTCGTCACGATGGAGTTTCTTGCTGTGAGTGGAAACATGTTGTCAGGAAGGTTTCCACAAGCCATCTTAAATATCTCTACTCTCACTAATCTTTACCTTACTTTGAATCATCTAAGTGGAGAGGTACCATCAGATCTCCTTGACTCTCTACCTAATCTACAAAAACTTCTACTGGGCCACAATTTATTTCGAGGACATATCCCTCGCTCATTGGGAAATACTTCCAACCTACATTTGCTGGACATATCAAATAACAATTTCACCGGCATTGTACCAAGTTCCATTGGCAAACTAACCAAATTGTCTTGGTTAAATACTGAATTCAATCAACTCCAGGCACACAAAAAGGAAGATTGGGAGTTTATGAACAGTTTAGCCAATTGCTCTAGACTACATGTTCTATCGATGGGAAATAACCGTCTAGAAGGCCATCTACCAAGTTCGTTAGGGAACTTATCCGCCCATCTGCGACAGCTTATTTTCTCAGGAAATCAGATATCAGGAATTTTTCCTTCCGGTGTAGAACACCTCTCCGACTTGAATTCTTTAGGACTAGATGATAATGAATTAACAGGTTCCCTTCCTGAATGGCTTGGGAATCTTAAAAAGTTACAAAAGTTAACCTTGCAAAACAACAATTTCACAGGGTTTATTCCGTCATCTGTTTCGAATCTGTCTCAACTAGCAGTTCTCGGACTATATTCTAACAAGTTGGAAGGGCACATACCAAGCTTGGTAAACCTGCAAATGCTTCAACTACTACTCATTTCCAGCAATAATCTTCATGGCAGCATACCAAAAGAGATATTTAGTATTCCATCAATAATTGCAATTGATTTATCTTTCAACAACCTAGATGGGCAACTTCCTACTGAGATTGGCAATGCTAAACAACTCGTATCTTTGGGACTTTCATCCAACAAGTTGTTTGGAGATATTCCTAACAGTTTGGTAAGTTGTGAAAGTTTGGAATACATCGCGTTTGACTCTAATATTCTCAGCGGAGGCATCCCCACTTCATTAGGAAGCATAGGTGGCTTGACAGCTATAGATTTTTCTCACAATAATTTAACTGGTTCAATACCAGGTTCTCTTGGCAATTTGCAATTTCTTGAGCAACTAGATTTGTCATTCAACCATCTTAAGGGTGAGATTCCCACGAAAGGAATTTTCAAGAATGCAACAGCTTTCAGGATTGATGGAAATCAGGGCCTTTGTGGTGGGCCACCTGAGTTACACCTACAAGCATGTCCTATCATGGCTTTGGTTTCATCTAAGCACAAGAAATCAATAATACTGAAAGTAGTGATCCCAATAGCCAGCATTGTGTCAATTTCTATGGTCATACTTATTGTGCTTATGTGGAGAAGAAAACAAAACAGAAAATCTTTATCTTTGCCCTTGTTTGCTAGGCATTTGCCCCAAGTTTCATACAATATGCTTTTCAGAGCAACAGGGGGGTTCTCAACATCCAATTTGATAGGCAAAGGAAGATACAGTTATGTATATCGAGGAAAATTATTCGAAGATGATAATATGGTTGCTGTCAAAGTATTCAACCTAGAGACAAGGGGAGCACAAAAGAGCTTCATCGCAGAATGTAATACTTTGAGAAATGTTCGGCATCGCAACCTAGTTCCTATCCTAACTGCATGTGCAAGTATTGATTCAAAAGGAAATGATTTTAAGGCCTTGGTTTATGAGTTTATGGGACGAGGTGACTTGCATGCATTACTACACTCAACACAAAATGATGAAAACACTTCATATCTGAACCACATTACATTGGCTCAGAGGATAAGCATTGTGGTCGATGTATCTGATGCGTTGGAGTACCTGCACCATAACAACCAAGGAACTATTGTTCACTGTGATCTGAAGCCTAGCAACATACTTCTTGATGATGATATGATTGCTCATGTTGCAGACTTTGGACTTGCAAGATTCAAGACCGGTTCTTCAACACCATCTCTAGGTGATTCAAGCTCAACTTATTCCCTAGCAATAAAGGGAACCATTGGATATATCGCACCAGGTATTAGTTTGTTTTTCTTGTATTACACCGCTGCAAGTTTTATTTTATTATCTGACATGCTGATTTGTGTGAACTTAACTCTTGCTGGATGAAACTCTAGAATGCTCAGAGGGCGGTCAAGTTTCAACTGCCTCAGATGTATTCAGCTTTGGAGTTGTTCTCTTGGAACTATTTATTCGGAGAAGGCCAACACAAGACATGTTTATGGATGGATTGAGCATTGCAAAGCATGTAGAGATGAACTTCCCTGACAGGATACTAGAGATTGTTGATCCCCAGCTGCAACACGAGCTGGACCTTTGCCAAGAAACACCAATGGCAGTCAAGGAGAAAGGCATACACTGCCTGCGCAGTGTGCTAAATATTGGACTCTGCTGCACCAAGACAACACCGATTGAACGCATCAGCATGCAGGAGGTTGCTGCCAAGCTGCACGGAATCAAAGATTCATATCTCAGAGGAAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034889