BGIOSGA034898

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Revision as of 08:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034898| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034898, complete gene.| tag = OsI_352...")
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Gene Name

BGIOSGA034898

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034898, complete gene.

LocusTag

OsI_35293

Ensembl Transcript ID

BGIOSGA034898-TA

Ensembl Protein ID

BGIOSGA034898-PA

Length

3175

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3381064..3384238

Sequence Coding Region

3381064..3381825,3382453..3383740,3383841..3384238

Genome Context

<gbrowseImage1> name=IndicaChromosome11:3381064..3384238 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:3381064..3384238 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGATTGCTGCAACTGGACAGTTTCTCTTGGTCCTTATGGCATGCAGTGTAATCCAAATCGTGTGCCAATCGTTACATGGAAATGAGACAGATCGACTTTCGCTGCTTGATTTCAAGAATGCAATCATTTTGGATCCACATCAAGCATTAGTGTCCTGGAATGACAGCAATCAAGTTTGCAGTTGGGAAGGTGTCTTTTGTAGGGTGAAGGCCCCAAACCATGTTGTTGCACTTAATCTTACAAATCGAGACCTAGTAGGGACAATATCCCCTTCACTTGGAAACCTAACATTCCTCAAACATCTAAACCTAACAGGAAATGCTTTCACTGGACAGATCCCTGCATCCCTTGCCCACTTGCACCGTCTCCAAACCCTCTCCTTGGCCAGTAACACCTTACAAGGAAGGATACCAAACCTTGCAAATTATTCTGATCTCATGGTGCTGGATCTGTATAGAAACAATCTAGCTGGGAAATTTCCTGCAGATTTACCTCATAGCCTAGAAAAGCTGAGACTTTCATTTAATAATATCATGGGAACCATACCTGCTTCTCTTGCCAACATCACAACGCTAAAATACTTTGCTTGTGTTAACACTAGTATTGAGGGCAACATCCCAGATGAGTTTTCAAAGTTGTCTGCGCTGAAGATCTTGTATTTGGGTATCAATAAGCTATCAGGTAGCTTTCCAGAAGCCGTCCTGAATATTTCTGTTCTAACTGGACTTAGCTTGGCTTTTAATGATCTTCGAGGAGAGGCCCTTCAGATACTGGGTTTTTCAAATAACCACCTTCATGGTATAGTTCCGGAGGAGATATTCAGAATTCCAACAATATTATCAATCGATTTATCTTTCAACAATATATGGGGACCACTTCCTGCATACATTGGCAATGCAAAACGCCTTACGTATCTGACACTCTCATCAAATAATATATCTGGAGATATCCCTAACACCTTGGGAGACTGTGAAAGTTTGCAAGAAATCCAGTTCGGACAGAATTTTTTTAGTGGAGGAATTCCTACATCACTAAGCAAGATACTTAGCCTGAGTTTGCTTAATCTGTCTTACAACAACTTAACAGGACCAATACCAGATTCTCTTAGCAATTTGAAGTATCTTGGGCAACTTGATTTGTCATTCAACCATCTTAATGGTGAGGTCCCAACAAAAGGAATATTCAAGAATGCAACTGCCGTTCAAATTGGTGGCAATCAGGGGTTATGTGGTGGGGTGCTAGAGTTACACCTACCTGCATGCTCCATTGCACCTTTAAGTTCAAGAAAGCATGGAAAATCATTGACAATCAAAATAGTGATACCAATGGCCATCTTGGTATCACTCTTTTTGGTTGTATTGGTCTTACTACTCTTGAGGGGAAAACAAAAGGGACACTCTATATCTTTGCCACTGTCTGATACAGATTTTCCCAAAGTTTCTTACAATGATCTTTCAAGAGCAACTGAGAGGTTCTCCGTGTCCAATTTGATTGGCAAGGGGAGGTTCAGTTGTGTATACCAAGGAAAACTATTTCAATGCAATGATGTGGTTGCTGTGAAGGTATTCAGCCTAGAGACAAGGGGCGCACAAAAAAGCTTTATTGCAGAATGTAATGCTTTAAGAAATGTGAGACACCGTAATCTAGTTCCTATCCTAACTGCATGCTCCAGTATTGATTCTAAAGGCAATGACTTCAAAGCTTTAGTGTATAAGTTTATGCCAGGTGGGGATTTACATAAATTACTATACTCAAACGGAGGTGATGGAGATGCTCCACATCAAAACCACATTACATTGGCTCAGAGAATAAACATTATGGTGGATGTATCAGATGCACTGGAGTACCTGCACCATAGCAACCAAGGAACAATTGTTCACTGTGACCTGAAGCCTAGCAACATCCTTCTAGATGATAACATGGTTGCTCATGTTGGAGACTTTGGCCTTGCAAGATTCAAATTTGATTCGACAACATCATCTCTAAGTTATTCGAACTCAACCTCCTCCCTTGTAATAAAGGGAACCATTGGTTATATTGCTCCAGAATGCTCGGATGGTGGTCAAGTTTCAACTGCCTCAGATGTATACAGCTTTGGAGTTGTTCTCTTGGAAATATTTATTCGGAGAAGGCCAACAGACGATATGTTTATGGATGGATTGAGCATAGCAAAGTATACAGCTATCAACTTCCCTGACAGGATACTTGAGATTGTTGATCCCAAGCTGCAACAAGAATTGATCCCCTGTTCTACAGATAAGGAAGATTTGGACCCCTGCCAGGAAAATCCAATAGCAGTTGAGGAGAAAGGCCTACATTGTCTACGCTCTATGCTAAACATTGGACTCTGTTGCACCAAGCCAACACCAGGAAAACGCATCAGCATGCAAGAGGTGGCTGCCAAGTTGCACAGAATCAAAGATGCATATCTCAGGGAATACTAG</cdnaseq>

Protein Sequence

<aaseq>MKIAATGQFLLVLMACSVIQIVCQSLHGNETDRLSLLDFKNAIILDPHQALVSWNDSNQVCSWEGVFCRVKAPNHVVALNLTNRDLVGTISPSLGNLTFLKHLNLTGNAFTGQIPASLAHLHRLQTLSLASNTLQGRIPNLANYSDLMVLDLYRNNLAGKFPADLPHSLEKLRLSFNNIMGTIPASLANITTLKYFACVNTSIEGNIPDEFSKLSALKILYLGINKLSGSFPEAVLNISVLTGLSLAFNDLRGEALQILGFSNNHLHGIVPEEIFRIPTILSIDLSFNNIWGPLPAYIGNAKRLTYLTLSSNNISGDIPNTLGDCESLQEIQFGQNFFSGGIPTSLSKILSLSLLNLSYNNLTGPIPDSLSNLKYLGQLDLSFNHLNGEVPTKGIFKNATAVQIGGNQGLCGGVLELHLPACSIAPLSSRKHGKSLTIKIVIPMAILVSLFLVVLVLLLLRGKQKGHSISLPLSDTDFPKVSYNDLSRATERFSVSNLIGKGRFSCVYQGKLFQCNDVVAVKVFSLETRGAQKSFIAECNALRNVRHRNLVPILTACSSIDSKGNDFKALVYKFMPGGDLHKLLYSNGGDGDAPHQNHITLAQRINIMVDVSDALEYLHHSNQGTIVHCDLKPSNILLDDNMVAHVGDFGLARFKFDSTTSSLSYSNSTSSLVIKGTIGYIAPECSDGGQVSTASDVYSFGVVLLEIFIRRRPTDDMFMDGLSIAKYTAINFPDRILEIVDPKLQQELIPCSTDKEDLDPCQENPIAVEEKGLHCLRSMLNIGLCCTKPTPGKRISMQEVAAKLHRIKDAYLREY</aaseq>

Gene Sequence

<dnaseqindica>1..762#1390..2677#2778..3175#ATGAAGATTGCTGCAACTGGACAGTTTCTCTTGGTCCTTATGGCATGCAGTGTAATCCAAATCGTGTGCCAATCGTTACATGGAAATGAGACAGATCGACTTTCGCTGCTTGATTTCAAGAATGCAATCATTTTGGATCCACATCAAGCATTAGTGTCCTGGAATGACAGCAATCAAGTTTGCAGTTGGGAAGGTGTCTTTTGTAGGGTGAAGGCCCCAAACCATGTTGTTGCACTTAATCTTACAAATCGAGACCTAGTAGGGACAATATCCCCTTCACTTGGAAACCTAACATTCCTCAAACATCTAAACCTAACAGGAAATGCTTTCACTGGACAGATCCCTGCATCCCTTGCCCACTTGCACCGTCTCCAAACCCTCTCCTTGGCCAGTAACACCTTACAAGGAAGGATACCAAACCTTGCAAATTATTCTGATCTCATGGTGCTGGATCTGTATAGAAACAATCTAGCTGGGAAATTTCCTGCAGATTTACCTCATAGCCTAGAAAAGCTGAGACTTTCATTTAATAATATCATGGGAACCATACCTGCTTCTCTTGCCAACATCACAACGCTAAAATACTTTGCTTGTGTTAACACTAGTATTGAGGGCAACATCCCAGATGAGTTTTCAAAGTTGTCTGCGCTGAAGATCTTGTATTTGGGTATCAATAAGCTATCAGGTAGCTTTCCAGAAGCCGTCCTGAATATTTCTGTTCTAACTGGACTTAGCTTGGCTTTTAATGATCTTCGAGGAGAGGTGGCATCAGACCTTGGTAACTCTCTGCCCAATCTCGAATTATTCGAATTAGATGGCAACTCATTTCATGGGAAAATCCCACCATCAATAACAAATGCTTCTAACCTATACCTTATCGAAGTATCAAACAATAATTTCACCGAGGGGTTGCCTAGCTCAATCGGCAAACTTTCTAAACTATCTTGGTTAAATCTTGAGCGGAATAAATTCCATGGACGTAACGAGGAAGACTGGGAGTTTCTGAACAGCTTATCTAATTGCACTGAGCTACAAATGTTCTCTGTAGCTTGGAATCGTCTGGAAGGACAAGTGCCAAAGTCCTTTGGCAACTATTCAATTCAACTGCAGTATGTGCACATGGGACAAAATCGACTGTCCGGGGGTTTTCCATCTGGCCTAGAAAACCTTCCCAACCTGATTGTTGTAGAATTAAGTGGAAATCAATTAACAGGTGTTCTTCCAGATTGGATTGGGGCTCTCAAAAGCTTGCAAAAACTAACTGTGCGTGACAACATCTTTACAGGGTTCATTCCATCATCCCTGTCCAATTTAACGAATTTGGTGAAACTCTTTCTATACTCCAATCAGTTCAGTGGACAGATACCTGCAAGTTTGGGAAATCTTCAGGCCCTTCAGATACTGGGTTTTTCAAATAACCACCTTCATGGTATAGTTCCGGAGGAGATATTCAGAATTCCAACAATATTATCAATCGATTTATCTTTCAACAATATATGGGGACCACTTCCTGCATACATTGGCAATGCAAAACGCCTTACGTATCTGACACTCTCATCAAATAATATATCTGGAGATATCCCTAACACCTTGGGAGACTGTGAAAGTTTGCAAGAAATCCAGTTCGGACAGAATTTTTTTAGTGGAGGAATTCCTACATCACTAAGCAAGATACTTAGCCTGAGTTTGCTTAATCTGTCTTACAACAACTTAACAGGACCAATACCAGATTCTCTTAGCAATTTGAAGTATCTTGGGCAACTTGATTTGTCATTCAACCATCTTAATGGTGAGGTCCCAACAAAAGGAATATTCAAGAATGCAACTGCCGTTCAAATTGGTGGCAATCAGGGGTTATGTGGTGGGGTGCTAGAGTTACACCTACCTGCATGCTCCATTGCACCTTTAAGTTCAAGAAAGCATGGAAAATCATTGACAATCAAAATAGTGATACCAATGGCCATCTTGGTATCACTCTTTTTGGTTGTATTGGTCTTACTACTCTTGAGGGGAAAACAAAAGGGACACTCTATATCTTTGCCACTGTCTGATACAGATTTTCCCAAAGTTTCTTACAATGATCTTTCAAGAGCAACTGAGAGGTTCTCCGTGTCCAATTTGATTGGCAAGGGGAGGTTCAGTTGTGTATACCAAGGAAAACTATTTCAATGCAATGATGTGGTTGCTGTGAAGGTATTCAGCCTAGAGACAAGGGGCGCACAAAAAAGCTTTATTGCAGAATGTAATGCTTTAAGAAATGTGAGACACCGTAATCTAGTTCCTATCCTAACTGCATGCTCCAGTATTGATTCTAAAGGCAATGACTTCAAAGCTTTAGTGTATAAGTTTATGCCAGGTGGGGATTTACATAAATTACTATACTCAAACGGAGGTGATGGAGATGCTCCACATCAAAACCACATTACATTGGCTCAGAGAATAAACATTATGGTGGATGTATCAGATGCACTGGAGTACCTGCACCATAGCAACCAAGGAACAATTGTTCACTGTGACCTGAAGCCTAGCAACATCCTTCTAGATGATAACATGGTTGCTCATGTTGGAGACTTTGGCCTTGCAAGATTCAAATTTGATTCGACAACATCATCTCTAAGTTATTCGAACTCAACCTCCTCCCTTGTAATAAAGGGAACCATTGGTTATATTGCTCCAGGTAACTGTTAACTTTACCTTGTTTTGCATTGCTACATATTTAATTTATTGTCTGATATATGCCAACTTGTGAACTCAACTCTTGTCATATGTAATTTTAGAATGCTCGGATGGTGGTCAAGTTTCAACTGCCTCAGATGTATACAGCTTTGGAGTTGTTCTCTTGGAAATATTTATTCGGAGAAGGCCAACAGACGATATGTTTATGGATGGATTGAGCATAGCAAAGTATACAGCTATCAACTTCCCTGACAGGATACTTGAGATTGTTGATCCCAAGCTGCAACAAGAATTGATCCCCTGTTCTACAGATAAGGAAGATTTGGACCCCTGCCAGGAAAATCCAATAGCAGTTGAGGAGAAAGGCCTACATTGTCTACGCTCTATGCTAAACATTGGACTCTGTTGCACCAAGCCAACACCAGGAAAACGCATCAGCATGCAAGAGGTGGCTGCCAAGTTGCACAGAATCAAAGATGCATATCTCAGGGAATACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034898