BGIOSGA034904

From RiceWiki
Revision as of 08:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034904| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034904, complete gene.| tag = OsI_352...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA034904

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034904, complete gene.

LocusTag

OsI_35299

Ensembl Transcript ID

BGIOSGA034904-TA

Ensembl Protein ID

BGIOSGA034904-PA

Length

5678

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3433795..3439472

Sequence Coding Region

3433795..3434078,3436362..3438115,3439105..3439472

Genome Context

<gbrowseImage1> name=IndicaChromosome11:3433795..3439472 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:3433795..3439472 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGAGTAGCTGTGGAAGACTTACGTGGAGGCTTTCCGTGGCGTGGCCATCGGAGAAGGCGAAGAAGTACGTGCACGGGGAGACGGCGTCCTCGCAAAACACCACCGGGCGCACATCGCCGTCGCCGCCGTCAACGCCTCCTCCGGCAGCGGCAGCTGGGACGCACGCACTCAGGCCAGAGACCGCCAGGGGTAGGAGCAGGCCCTCCCGGGGAGCAACCCGAGGACGAGCGATGCGTGAGGGCGGAAGAGGAGGAGGACGGATAACCGGAGGAGGAGTGAGCTCACATGCAGTCATCTGTTCAACTTTTGGAAATGGAACAGATCAGCTGTCACTTCTTGAATTCAAGAAGGCAATCAGTCTTGATCCACAGCAATCCTTGATGTATTGGAATGATAGCACCAACTACTGCAGCTGGGAAGGTGTCTCATGCAGTCTGAAGAATCCAGGTCGTGTCACCTCCCTTAATCTTACAAACCGAGCTCTAGTAGGGCACATCTCTCCTTCACTTGGGAACCTAACATTCCTGAAGTATCTTGCGCTGCCCAAAAATGCACTCTCTGGAGAAATCCCTCCTTCCCTTGGACATTTGCGTCGCCTCCAGTATCTTTACTTGAGTGGCAACACACTGCAAGGAAGCATACCAAGCTTTGCAAACTGCTCAGAGCTCAAGGTTCTGTGGGTGCACAGAAACATCCTAACTGGGAAGTTTCCTGCAGATTGGCCTCCTAAGCTTCAACAGCTGCAACTTTCAATCAATAATCTGACAGGTGCAATCCCTGCTTCTCTTGCCAACATCTCCTCACTTAATGTGCTTAGTTGCGTGTATAATCACATAGAAGGGAACATTCCGAATGAGTTTGCGAAGTTACCCAACCTTCAGACTCTTTATGTGGGTTCTAATCAACTGTCAGGTAGCTTTCCACAAGTCCTCTTGAATCTTTCTACTCTCATTAACCTTAGCCTCGGCCTTAATCATCTAAGTGGAGAGGTTCCATCCAATCTCGGTAGCGCTCTGCCCAATCTTGAGATATTTGAATTGCCTGTCAACTTCTTTCATGGGCGTATTCCCAGTTCACTGACAAACGCTTCCAATTTATATTTCCTTGAGTTATCAAATAACAATTTCACCGGATTGGTGCCTAGAACAATTGGGGAACTTAACAAGCTCCAGATGTTGAATCTTGAATGGAATCAGCTCCAAGCACATAGAGAACAAGATTGGGAGTTTCTGCAAAGCTTGGGCAACTGCACTGAGCTACAAGTTTTCTCCATGACTGGGAACCGTCTACAAGGGCATGTGCCTAGTTCGTTGGGTAACCTTTCTGATCAACTCCAGGAGCTACACTTGGCAGAAAGTAAACTTTCAGGTGATTTTCCTTCAGGTATAGCAAACCTTCAGAACCTGATTATTGTGGCGTTGGGTGCTAATCAATTTACAGGTGTGCTTCCAGAATGGCTTGGAACCATCAAAACTTTGCAAAAGGTATCTTTGGGTAGCAATTTGTTTACTGGAGCCATCCCATCATCTTTCTCAAATCTGTCTCAATTGGGAGAACTATATTTAGACTCAAACCAGTTAGTTGGCCAATTACCACCAAGCTTTGGAACCCTCCCAATCCTTCAAGTATTGATTGTATCGAACAATAATCTTCATGGTAGCATACCAAAGGAGATCTTCAGAATTCCAACCATAGTGCAAATTAACTTATCTTTCAACAATCTAGATGCACCCCTCCATAATGACATTGGCAAGGCAAAACAACTCACATATCTTCAGCTTTCATCAAATAATATATCTGGATATATTCCTAGCACTTTGGGTGACTGTGAAAGTTTGGAAGACATAGAGTTGGACCACAACGTTTTCAGTGGAAGCATCCCTGCATCTCTAGAAAACATAAAGACTCTAAAAGTTCTCAACTTGTCTTACAACAACCTGTCTGGATCAATACCGGCATCACTTGGTAACCTACAACTTGTTGAACAACTAGACCTATCATTCAACAATCTTAAGGGAGAGGTCCCAACAAAAGAATGTGCTGGGGGTGGTCGAGTTTCAACCGCCTCGGACATCTACAGCTTTGGAATTGTTCTCCTCGAGATATTCATTCGAAGGAAGCCGACAGATGACATGTTCAAGGATGGACTGAGCATCTCAAAGTATACAGAGATCAATTTCCCTGATAAGATGTTGCAGATTGTTGACCCACAGCTGCTCCGAGAACTAGACATCTGCCAAGAAACCTCAATTAATGTTGAGAAAAATGAAGTGTGTTGCCTGCTTTCTGTGCTAAATATTGGACTTCATTGCACCAAGTTGGTCCCGGGCGAGCGCATGAGCATGCAGGAGGTGGCCTCCAAGCTGCATGGAATTAGGGATGAATATCTGAGAGGATACTGA</cdnaseq>

Protein Sequence

<aaseq>MVSSCGRLTWRLSVAWPSEKAKKYVHGETASSQNTTGRTSPSPPSTPPPAAAAGTHALRPETARGRSRPSRGATRGRAMREGGRGGGRITGGGVSSHAVICSTFGNGTDQLSLLEFKKAISLDPQQSLMYWNDSTNYCSWEGVSCSLKNPGRVTSLNLTNRALVGHISPSLGNLTFLKYLALPKNALSGEIPPSLGHLRRLQYLYLSGNTLQGSIPSFANCSELKVLWVHRNILTGKFPADWPPKLQQLQLSINNLTGAIPASLANISSLNVLSCVYNHIEGNIPNEFAKLPNLQTLYVGSNQLSGSFPQVLLNLSTLINLSLGLNHLSGEVPSNLGSALPNLEIFELPVNFFHGRIPSSLTNASNLYFLELSNNNFTGLVPRTIGELNKLQMLNLEWNQLQAHREQDWEFLQSLGNCTELQVFSMTGNRLQGHVPSSLGNLSDQLQELHLAESKLSGDFPSGIANLQNLIIVALGANQFTGVLPEWLGTIKTLQKVSLGSNLFTGAIPSSFSNLSQLGELYLDSNQLVGQLPPSFGTLPILQVLIVSNNNLHGSIPKEIFRIPTIVQINLSFNNLDAPLHNDIGKAKQLTYLQLSSNNISGYIPSTLGDCESLEDIELDHNVFSGSIPASLENIKTLKVLNLSYNNLSGSIPASLGNLQLVEQLDLSFNNLKGEVPTKECAGGGRVSTASDIYSFGIVLLEIFIRRKPTDDMFKDGLSISKYTEINFPDKMLQIVDPQLLRELDICQETSINVEKNEVCCLLSVLNIGLHCTKLVPGERMSMQEVASKLHGIRDEYLRGY</aaseq>

Gene Sequence

<dnaseqindica>1..284#2568..4321#5311..5678#ATGGTGAGTAGCTGTGGAAGACTTACGTGGAGGCTTTCCGTGGCGTGGCCATCGGAGAAGGCGAAGAAGTACGTGCACGGGGAGACGGCGTCCTCGCAAAACACCACCGGGCGCACATCGCCGTCGCCGCCGTCAACGCCTCCTCCGGCAGCGGCAGCTGGGACGCACGCACTCAGGCCAGAGACCGCCAGGGGTAGGAGCAGGCCCTCCCGGGGAGCAACCCGAGGACGAGCGATGCGTGAGGGCGGAAGAGGAGGAGGACGGATAACCGGAGGAGGAGTGAGGTGGGTGGGCGGCAGGAGGCAACCGGCGGCGCTCGGAGGAGGCGGCGGCCGGCGGCGAGTGGGTGGCCGGCGAGGCGAATGACGAGAGACGAGGTGGGCCCAGTGGAGCGATCTCCATGGGGTGAGGGTTATTGGGCCGGGAAATCTGTCATCCCAGACTGGGCCAAGTTGAATTTTGGGCCAACTGCATTTCACCCATCTAACGGTCGCATATCATCTCAAATTCAGTTTTGCTATATATATATATATCTATCCGCAATTTTTTTCTAAAAATTTGTCACATGATGCTAGTCTAATTACTACCTCCGTCCCAAAATAAGTGCAGTTTTGCACTATTCACGTTCAACGTTTGACCGTCTGTTTTATTTAAAAAATTTGTGAAAAAATTAAAAACATTTAGTCACAAATAAAGTACCATTCATGTTTTATCATCTAATAGCAATAAAAATACTAATCATAAAAAAATTTCAAATAAAACGGACGGTCAAACGTTGAACATAAATAGTGCAAAACTGCACTTATTTTGGGACGGAGGGAGTATATTTTAACTTGTATGAACTTTCATGTAATTTTAAACCGTTATATCTGCTTCATTATTCATGCAACCGAGAAAAGAAATATCACAGCATACGTATAGGTGAGTGAATTCAATCACATGACCTTCGCTTATTGAAATAATAATTTATCGTGAGATTCTTGAAAGTAATTTTAAAACTACATGTAAATTAACACTTAATTATACTACGATTATGCCGTATTTATATGTATTAAATTTACCAAATTTTTAGAGAAAATTTATGGATAAAATGTATACGTAGGGACACCCAAATTTCCATACGAGGATCGAAGATCTATTTTCTAGTACTAAATGGGGGTTTATGTCAAATCGCGCTGTTCTCCCTCCCTACCTCCTCTCCGGCAACCAGCGGCGCCCCGTCCGCCCTCCGGCGAAACCCCGCCGCCGCCGCCGCCGCCGCCTCCGCCTCAAGAGTGGCTCCACGCGGCCACTCCTGGTCGACATTGCTTCATCTGCTCCTCACACAGCCTCTCCTACATTCCTCAGGCTCCACGCGACCCACCTGGATGAGGGCCTCTTCCCGCGCCGCCGCGCCGTGCGCCGTCCGGACTCCGGCCGTCCGCTGCCCTGCTCCAGCTCGCGGTTCGCGCAGCACACCACAGGGAGTTTCTTATCCTTTTTTTTTTATTGAGAGCGAGAGAGAGAGAAAGAGAGGACGAAGGTTGATTTGGAGTTGGGGAATTTTGCTAATTTGGTGATTTGTTCTAACCTAGGAGGAGCATGGCCGCGTTTCGGAGAAGCTTAAGAAGCAAAGCCTATTTTATTCCACCGAGTAAAAATGTCCGGAAATCGTGGTGAACAGGTGCCTCTCTTCTAGTTCTTCCTCCCAAGTCAACATTTCACTGCTAATGACTAAACTAGTGCATTTTATATGTTGGAGAGTATGTCTTCATGTGTAGAGGATTCGAAATGATCCTCTGAAATTTGACTCCTAGATGGCGACAATGGAGTCCGAACAAACTTAGGTTAAGCACGCGGGTTGAATCAGGGTTGCAACTTGCAAGCTTTTGTTTAATCAGTTTATTATTAGATAATGCAAGCATGCCTTCCAGGTTATCATGTGAAAAAAATTCGGAATGAGATCCTCTGAATTTGACTCTTGGATGGTGACTATGATGTCCAAGTAAAACTAAGCTCAGCACGCGGACTGGATTAGGTTGCAAACATATTTTCTTTGGTTTTAGATAATGGAAGCATACCTTGCTGGTTTCAAGCATTGGTATTCTGTAGTAGGTACAAGATGAGTCCGTCCATGTCTCACTTGCACTAAAAGTTGGTGGGCTAGCTGGCCCGGGTTCGAGACTCAGTGACTCACTTATGCTTAATACCATTGATATGAAAGTACCTCCTTTCGTATCCAGCCTTTTCTTTTTTACTTGCATGGTTGCATTAGTCAACACTGCCACTTCTTTTAAATCTTGCCAAAGGAACATAGCAGAAAGCATTTGTCTTCACAAAAAGGAACGTATCTCAAGCTATATCATTCAGGTACATCAATTACCAACCACTGAATGTTTGTTTTGCTTGTTTCATTCTTTTTCAGATAGTTTCAATGTCTGAGTATTTGACAATGCTTCCTGAATATCTGAACTTTCCCTGTTTTATTGTCCATGCATACAAGCAGGATTGATCAATATTCGCCAGAACTTGATTGCCATGAAGATTACTGCAGTTGGACAGTTGATCTTGGTTCTGATGGCTTGCAGCTCACATGCAGTCATCTGTTCAACTTTTGGAAATGGAACAGATCAGCTGTCACTTCTTGAATTCAAGAAGGCAATCAGTCTTGATCCACAGCAATCCTTGATGTATTGGAATGATAGCACCAACTACTGCAGCTGGGAAGGTGTCTCATGCAGTCTGAAGAATCCAGGTCGTGTCACCTCCCTTAATCTTACAAACCGAGCTCTAGTAGGGCACATCTCTCCTTCACTTGGGAACCTAACATTCCTGAAGTATCTTGCGCTGCCCAAAAATGCACTCTCTGGAGAAATCCCTCCTTCCCTTGGACATTTGCGTCGCCTCCAGTATCTTTACTTGAGTGGCAACACACTGCAAGGAAGCATACCAAGCTTTGCAAACTGCTCAGAGCTCAAGGTTCTGTGGGTGCACAGAAACATCCTAACTGGGAAGTTTCCTGCAGATTGGCCTCCTAAGCTTCAACAGCTGCAACTTTCAATCAATAATCTGACAGGTGCAATCCCTGCTTCTCTTGCCAACATCTCCTCACTTAATGTGCTTAGTTGCGTGTATAATCACATAGAAGGGAACATTCCGAATGAGTTTGCGAAGTTACCCAACCTTCAGACTCTTTATGTGGGTTCTAATCAACTGTCAGGTAGCTTTCCACAAGTCCTCTTGAATCTTTCTACTCTCATTAACCTTAGCCTCGGCCTTAATCATCTAAGTGGAGAGGTTCCATCCAATCTCGGTAGCGCTCTGCCCAATCTTGAGATATTTGAATTGCCTGTCAACTTCTTTCATGGGCGTATTCCCAGTTCACTGACAAACGCTTCCAATTTATATTTCCTTGAGTTATCAAATAACAATTTCACCGGATTGGTGCCTAGAACAATTGGGGAACTTAACAAGCTCCAGATGTTGAATCTTGAATGGAATCAGCTCCAAGCACATAGAGAACAAGATTGGGAGTTTCTGCAAAGCTTGGGCAACTGCACTGAGCTACAAGTTTTCTCCATGACTGGGAACCGTCTACAAGGGCATGTGCCTAGTTCGTTGGGTAACCTTTCTGATCAACTCCAGGAGCTACACTTGGCAGAAAGTAAACTTTCAGGTGATTTTCCTTCAGGTATAGCAAACCTTCAGAACCTGATTATTGTGGCGTTGGGTGCTAATCAATTTACAGGTGTGCTTCCAGAATGGCTTGGAACCATCAAAACTTTGCAAAAGGTATCTTTGGGTAGCAATTTGTTTACTGGAGCCATCCCATCATCTTTCTCAAATCTGTCTCAATTGGGAGAACTATATTTAGACTCAAACCAGTTAGTTGGCCAATTACCACCAAGCTTTGGAACCCTCCCAATCCTTCAAGTATTGATTGTATCGAACAATAATCTTCATGGTAGCATACCAAAGGAGATCTTCAGAATTCCAACCATAGTGCAAATTAACTTATCTTTCAACAATCTAGATGCACCCCTCCATAATGACATTGGCAAGGCAAAACAACTCACATATCTTCAGCTTTCATCAAATAATATATCTGGATATATTCCTAGCACTTTGGGTGACTGTGAAAGTTTGGAAGACATAGAGTTGGACCACAACGTTTTCAGTGGAAGCATCCCTGCATCTCTAGAAAACATAAAGACTCTAAAAGTTCTCAACTTGTCTTACAACAACCTGTCTGGATCAATACCGGCATCACTTGGTAACCTACAACTTGTTGAACAACTAGACCTATCATTCAACAATCTTAAGGGAGAGGTCCCAACAAAAGGTATATTCAAGAACACAACTGCTATAAGGGTTGGTGGAAATCCAGGACTTTGTGGTGGTTCACTGGAGCTACACCTACTCACTTGTTCTAGCACTCCTTTGAATTCAGTTAAGCATAAGCAATTTATTTTTCTGAAAGTAGTTCTCCCAATAGCTATCATGACTTCACTTGTCATCGCCATCTCTATTATGTGGTTCTGGAATAGAAAACAAAACAGACAATCTATTTCTTCACCTTCATTTGGCAGGAAATTTCCCAAAGTTTCTTACAGTGATCTTGTGAGAGCAACAGAGGGATTCTCTGCATCCAATTTAATTGGCAGAGGAAGATATGGTTCTGTATATCAAGGGAAACTATTTCCGGAGAGGAATTTGGTTGCCGTGAAAGTTTTCAATCTTGAAACAAGGGGTGCAGGAAAGAGTTTTATCGCAGAATGTAATGCCCTGAAAAATGTGCGACATCGTAATCTAATCACTATCCTTACTGCATGCTCCAGTATCGATTCATCTGGAAATGATTTTAAAGCCCTAGTGTATGAATTTATGCCACGAGGGGACTTACATAACTTACTATACTCAACTCGAGATGGCGATGGATCTTCAAATTTGTACTATGTTTCCCTTGCTCAAAGATTAAACATCGTGGTGGACGTATCAGATGCATTGGCATACCTACACCATAACCATCAAGGAAGCATTGTTCACAGTGATCTTAAACCTAGCAACATTCTTCTCGATGATAATATGACAGCTCATGTTGGAGACTTTGGACTAGCAGCATTCAAATCTGATTCCGCAGCATCATCTTTTGGTGACTCAAGTTTGACTTCTTCCTTTGCAATAAAGGGAACCATAGGATATGTTGCTCCAGGTATTGCTCATTTCACATTGAATTCTCTTTGAAGTTGACTGGCACATTCCAAATTTTTGTATATTCATGTGAACATGTGAAATAATGGGGAGTAAACCCTTCCTATTTGTGATTTACAGAATGTGCTGGGGGTGGTCGAGTTTCAACCGCCTCGGACATCTACAGCTTTGGAATTGTTCTCCTCGAGATATTCATTCGAAGGAAGCCGACAGATGACATGTTCAAGGATGGACTGAGCATCTCAAAGTATACAGAGATCAATTTCCCTGATAAGATGTTGCAGATTGTTGACCCACAGCTGCTCCGAGAACTAGACATCTGCCAAGAAACCTCAATTAATGTTGAGAAAAATGAAGTGTGTTGCCTGCTTTCTGTGCTAAATATTGGACTTCATTGCACCAAGTTGGTCCCGGGCGAGCGCATGAGCATGCAGGAGGTGGCCTCCAAGCTGCATGGAATTAGGGATGAATATCTGAGAGGATACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034904