BGIOSGA034906

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Revision as of 08:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034906| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034906, complete gene.| tag = OsI_353...")
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Gene Name

BGIOSGA034906

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034906, complete gene.

LocusTag

OsI_35311

Ensembl Transcript ID

BGIOSGA034906-TA

Ensembl Protein ID

BGIOSGA034906-PA

Length

5616

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3506120..3511735

Sequence Coding Region

3506120..3506201,3506321..3506483,3506896..3506937,3507221..3507315,3507661..3507722
,3507804..3507895,3507975..3508110,3508206..3508292,3508818..3508907
,3509357..3509459,3509538..3509645,3510004..3510104,3510225..3510290
,3510394..3510481,3510872..3510932,3511014..3511077,3511607..3511735

Genome Context

<gbrowseImage1> name=IndicaChromosome11:3506120..3511735 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:3506120..3511735 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCCGGCGAGTGCTCCAGCTCCCAGCCCTGCGCGTCCTCCTCGCCGGACGCCGCCGGTGGCGTTTGGGCCAAGCTAGTGCCCTCCGATTCCGCGTTCCCGGAGGTGGAGCTGGCCGAGGACGACGCCGTGGTGTGCTCCCGGGTCACCCCGGACGGCGGCGGGGAGGTGGCCGCGTGGTGCGAGATTAGGCGCGGCGGCGGCGATGGCGACGCGTCGTCGGCGACGATTCGGAATCTGAGAGGCGAGCCCCTGGAGACAGGGAAGAGGCAGAGTGGTCATGGCTCGGATGCAATTATTGTCGATGGAAGAGTGATCCAGCAAGAAGCAGTTGACATCAAACCGGGGAGTGAAATTGTTTCAGGACCCCAGAAAGATGGGCATCTGTTGTACACCTTTGATATAACAGGCCTGAATGACCAGGACAAAACTAATATCAAGATTGTGCTGGATATTGAGAATGCAAAGTGCAGCATATGCTTAAATTTGTGGCATGATGTTGTTACTGTTGCTCCATGCCTCCACAACTTCTGCAACGGTTGCTTCTCTGAGTGGTTAAGAAGGTCTTCAGCTAATTCGCGTGATAAAAGTCAGAGTGCTGCCTGTCCACAATGTAGGACGGCAGTGCAATCAGTTGGTAGGAATCACTTCCTACATAATATTGAAGAGGCTATACTGCAAGCTTTTTCATCGCTACAGCGGTCTGATGAGGAGATTGCATTGTTGGAGTCATATGCCTCGGTCAAGACAAATATTGCATGGCATGCATTCATCCCTTTTCCATGGTCTTATGCTGGTGCGATGATTCTTAGATCCACCATGGGGATAAACATCTGTCAGAGGGAGGTTTTGGGGAAACAGAAAATCCAGTCAAGGAAGCGCCGTTTGCCACGTTCAAATGATGAAGCTAACCATACTAACCATGCTGATTTTCTATGCCCTCAATGTGGTGCTGAATTTGGTGGATTTAGGTGCAGTCCAGGTGCTCCACACTTGCCGTGTAATGGATGTGGAGGAATGATGCCAGCCAGACCTGACACCAGTATACCACAAAAATGTTTGGGATGTGATAGGGCATTTTGTGGAGCTTATTGGTGTTCCCAAGGAGTGAATTCAAGTCAGCATAATCCAATCTGTGATCAGGAAACTTTCAAGATGATCTCTCAGCGCCATATCTCTAGTGTTCCTGACACAGTACATGGAGGCAATCAATACGAGAAAGATATTACAGAAAGATGTATACAGCAATCAGGCAAAGCATTGCAAGCTATAATCTCAGAGTGGATAGTGAAGTTTGACAATAAGGAGCTTGATCGCTCAAGGCTGCAGCTGAACCATGTTGATGCAATTACTTCTAGGACATACGTCTGCAACCAATGCTACAGCAAGTTCATCGATTTCCTGCTCTACTGGTTCCGTGTATCAATGCCAAGAAATCTCCTTCCACCTGATGCTGCTAACAGGGAGAGCTGCTGGTATGGTTTCATGTGCCGAACCCAGCACCACCGGCCTGACCATGCTAAGAAGCTCAACCATGTCTGTCGTCCAACAAGAGGCAACCCCTAG</cdnaseq>

Protein Sequence

<aaseq>MDAGECSSSQPCASSSPDAAGGVWAKLVPSDSAFPEVELAEDDAVVCSRVTPDGGGEVAAWCEIRRGGGDGDASSATIRNLRGEPLETGKRQSGHGSDAIIVDGRVIQQEAVDIKPGSEIVSGPQKDGHLLYTFDITGLNDQDKTNIKIVLDIENAKCSICLNLWHDVVTVAPCLHNFCNGCFSEWLRRSSANSRDKSQSAACPQCRTAVQSVGRNHFLHNIEEAILQAFSSLQRSDEEIALLESYASVKTNIAWHAFIPFPWSYAGAMILRSTMGINICQREVLGKQKIQSRKRRLPRSNDEANHTNHADFLCPQCGAEFGGFRCSPGAPHLPCNGCGGMMPARPDTSIPQKCLGCDRAFCGAYWCSQGVNSSQHNPICDQETFKMISQRHISSVPDTVHGGNQYEKDITERCIQQSGKALQAIISEWIVKFDNKELDRSRLQLNHVDAITSRTYVCNQCYSKFIDFLLYWFRVSMPRNLLPPDAANRESCWYGFMCRTQHHRPDHAKKLNHVCRPTRGNP</aaseq>

Gene Sequence

<dnaseqindica>1..82#202..364#777..818#1102..1196#1542..1603#1685..1776#1856..1991#2087..2173#2699..2788#3238..3340#3419..3526#3885..3985#4106..4171#4275..4362#4753..4813#4895..4958#5488..5616#ATGGACGCCGGCGAGTGCTCCAGCTCCCAGCCCTGCGCGTCCTCCTCGCCGGACGCCGCCGGTGGCGTTTGGGCCAAGCTAGGTGCGGCCGCCCTCCTCCCCCACCCCACCCTTCCTTTTTCTTGGGTTTCTTCCGCCGCACGGGTTCTTGATTCTTGACCTTTTCGTTGGTCTTGCCCTTGGCCATTGCTTGCACTGCAGTGCCCTCCGATTCCGCGTTCCCGGAGGTGGAGCTGGCCGAGGACGACGCCGTGGTGTGCTCCCGGGTCACCCCGGACGGCGGCGGGGAGGTGGCCGCGTGGTGCGAGATTAGGCGCGGCGGCGGCGATGGCGACGCGTCGTCGGCGACGATTCGGAATCTGAGGTATCTCCCCTTTTCTGCTTTGCTCTTCTGGACTGTGCATTGTAGGCAAGATACGCTCTTTTTCTGCAATCTTGTTTTATCGGATTGGGGGAACAAATGCCATTCATTGATGATGCGTGTTTGGACGAAGGTTATAAAATGCAGAAAAGTTCGTACTGATTGCGATTGAATGTGAGTTGTTGTCGTTTGGATTATGTGAATCGTTGCGGTGTGGTAGCATCGTGTTCGTGTTCTTGATCACCTCCCAATACCAAAATTAAAGAAAAGTTTCCTGTGGATAAAAAAGATTCAGATTTGCTAATGATTCTAAAGCGCCTTGATTTTCTTATCCATAACTCACTTTCCAAACTTCTGAACCTGATTGATCAAACCAAAAATGAACTTTTGAATCGTGCTCATTTGAAATCGATAGAGGCGAGCCCCTGGAGACAGGGAAGAGGCAGAGTGGTCATGGGTGAGTTTTTTTTTTGGGGGGTGGAGGGTAGAGGAGAAGGGAAGTTCACTTCTGTGGCCAAGGTGGCAGGAGGGTCATGCAGGTTGGAAATGAGGAAGTTTTTCTATATTTATATAAATAGTTTCTCTATGTGCGTACATCATAGCCAACCTGTGTTGCAACCTTCTGTTATTCCTTTTATCAAATTCTCGCTGATGTTAGATGCCTGTCTTGTCATCCTTGTAATGTATGTTTCATTGGACCTCTATCGTACGTTAACATTATCCATGTGCCATTGAGAAAGCTCGGATGCAATTATTGTCGATGGAAGAGTGATCCAGCAAGAAGCAGTTGACATCAAACCGGGGAGTGAAATTGTTTCAGGACCCCAGAAAGATGGTGAGATAACTATGTATTTTGAGTTTGGCATTTCATGCATAGATTGGTGATTGTGTATATTTAATGGTCTTCTATTTTTTTTAAGTGGACTATTTTATGCCTTTATGAAGCCAAATGAGTGTTTACACATGACTCTGAATATATGTACTCATTGAGTCATTTTGAATGTTTATTGTTTCCTAGACCTTTCTGTTTATAAAGTGAAAAATCTATGGTTGCATGTTCGTAATTGTGCTTCCGAACAATTTATCAAATTACAAATGTTTATCCTTTTGTGATTCCGTTATGTTGAACAGGTGAACTGTACCACTATGTAATGCATTTATGCTATCCATCTTCTTGCAGGGCATCTGTTGTACACCTTTGATATAACAGGCCTGAATGACCAGGACAAAACTAATATCAAGGTATTTTGTTGAAATGAATGTTGATCAACAACAACCTCGGTGCATAAACGTCACTAACTTTTATTTAAATGATGATGTCAGATTGTGCTGGATATTGAGAATGCAAAGTGCAGCATATGCTTAAATTTGTGGCATGATGTTGTTACTGTTGCTCCATGCCTCCACAACTTCTGGTACTTTTGCCAATTTTCCTAGCTATTTTTGATTTATCTCAAAATTCTGATTGGTGCTCATTTCTGTATTCCTTTTAAGCAACGGTTGCTTCTCTGAGTGGTTAAGAAGGTCTTCAGCTAATTCGCGTGATAAAAGTCAGAGTGCTGCCTGTCCACAATGTAGGACGGCAGTGCAATCAGTTGGTAGGAATCACTTCCTACATAATATTGAAGAGGTGTGATAGTTGTGTTTAGTGACTTAACTCCTCAATACTGTTTAAGTGCTACCTATTGTACAGCTGAGATGTTTATTATAGTTCTGCTTTTGTAGGCTATACTGCAAGCTTTTTCATCGCTACAGCGGTCTGATGAGGAGATTGCATTGTTGGAGTCATATGCCTCGGTCAAGACAAATATTGTGAGTTAAAAATCTTACTAAGAAATTGTTGATTTCCACCATTTTCTCAATGGATTGTATAAAGTGTTGCACCAGTCTCTTATCTGCCAGCACTGATATTTGTCCCTGTTATCTGCCATAAAATCGAATATTGTTTTAAAATCATCACCCTTTTTTAACTTGTTTATATATTGTTGTTCATTTTAGAGAAGTGCCTTCCTCAGTCATTTGTTATTAGTTGCTGATAAATATTTAGTTTTGCTGTTGATAGCTTTTGAACTTTAAAAAGCTTGTAGTTAGCCTTCCCTACAAATAAAAAATGGCAGCTTGTAATTATGGACAATTCAAGGCCTTTCTCATGATAATGTGATGTTATATATAAATTGAAGGTTGCATGAGTTTTGTCATAAAATATTGTTGGGGCTAATTTTAATTACTCAATTCATATGAAATTTAATTGTGAAACTTTATCTAAGTAGGCGCAGCAGTTGTATTTTAACATTTCTGCTATTCAGTCTATGATGTATTTTAACCTAAAATTCACAGGCATGGCATGCATTCATCCCTTTTCCATGGTCTTATGCTGGTGCGATGATTCTTAGATCCACCATGGGGATAAACATCTGTCAGAGGGAGGTCAGATGGCAACGACTCAAAGTAGAACAGAGCTAGGTGAAGTAGGGTACAATTGAGGGAGCAATAGATCTATAATAGCTTGCCATGAGAGAGACCAGAGCTGACTAGAGACTTGTTTATTCATCTTAGCTTAACGGAAATGTATAATCCCCATCCTTGTGATAATTTGACCCTGAAGCTTATCTCTAAAATAAGGAATAGATACCAACCCAATCTAATCTGTTAAAATCAACTGGCATGAACAGTACCCCTGAACATGACAATTTGTCTGTCTGATGGATAAAATGCCTTACTATTAGAGCCAGTTGAGTCACAGGACAATTAATACCCGACTCACCAAGGTTATAGGTGTTTTCTATGCTATAATATATATGTTGCAAGTATATTTGTTTTGGTATTTAAATGATCAGTCCCATGATTCTGAGTTGCTGTCAATGTTCATACCTTAGGTTTTGGGGAAACAGAAAATCCAGTCAAGGAAGCGCCGTTTGCCACGTTCAAATGATGAAGCTAACCATACTAACCATGCTGATTTTCTATGCCCTCAATGTGGTAAGTGTTGAAATTTCATTTTTAATATTTTTATTCTTCTTTTTAGACATGTTACTCAAATGAGAAAAATAAATGCAGGTGCTGAATTTGGTGGATTTAGGTGCAGTCCAGGTGCTCCACACTTGCCGTGTAATGGATGTGGAGGAATGATGCCAGCCAGACCTGACACCAGTATACCACAAAAATGTAACCGATAATTCTGACCATATTACAAGATTGTAATTCTATAATTCAGTTGTTATTTGATTGATTATTCAACGTAACCATGTGTGCTGCCGTTATGTTAGGAACTGGACATATCTATGTTCATATTTTTTTCTTGCCATACTAATATGCTTGGTATCAATTAGATGAGCTAAAATTATTTTTATTACATAATTGAGGAGTATGATAGATATGCACGATTGCCTCAAGATGTATTTTGAAGTTTGCAGGCATCATGAGTAGCTTGATTGCACCTTTTCCCTACTGAATGTTTATGAAAATTATATCCTCTGTATTCTTTTTAATTTTCTGGCTCTAATCTATCAACCTTATATTGCAGGTTTGGGATGTGATAGGGCATTTTGTGGAGCTTATTGGTGTTCCCAAGGAGTGAATTCAAGTCAGCATAATCCAATCTGTGATCAGGAAACTTTCAAGATGGTAAGATAATCTATTACTTATATCTTTTAGACCCCACTGTACTCCATCATCATACAGTACATGTTGTGTACTTATATTCACTGTTTGACATGTTGTGTGGATAACTGCATAACTTTGCAGATCTCTCAGCGCCATATCTCTAGTGTTCCTGACACAGTACATGGAGGCAATCAATACGAGAAAGATGTAGGAAGTTTTAACATGATCTTATACTATCATATTGCTCCTTTTATACCCCAGATAGTAGTTTCACATGTGAGTACTGAGTATAGTATTTTCTCCTCTCTAGATTACAGAAAGATGTATACAGCAATCAGGCAAAGCATTGCAAGCTATAATCTCAGAGTGGATAGTGAAGTTTGACAATAAGGAGCTTGGTAACCTTCTATCTAGTTAAGCTAATTTTTTCGTTGATGCAAAATCTGATTATATTTGTTATTTAGTTGTAGTACATATTCATGTTGCAGTTTTGCATTTCTTACATCGTGATTACATCATGATTGTTCTAGCATACGAATGACCTGTTAATAGCAACAATTTACACAGTGCCTGAGTTGTGTTTTTGCTTTGAATGGACAAACTTTATGTATGACTTGAATGTTGAGAAGGAAAACCTACTTCTGGGGACAATTTTCTCTTTGTTTAGCGGATTACTATCTTGTTGCACAATGGACATGCCCCCATCTGTCACATTGTATGATATGCTGTTCTTACTGCACATGCCATCTGTCACATTTGTATGATATACTGTTCTTTTGTGCATGCAGATCGCTCAAGGCTGCAGCTGAACCATGTTGATGCAATTACTTCTAGGACATACGTCTGCAAGTAATTATTTTCCCTAGTTTACAAGAATAGTTCGATTTCATCTTGCTCATTTATCTCATTTTGGACTTCCAACAAATGCAGCCAATGCTACAGCAAGTTCATCGATTTCCTGCTCTACTGGTTCCGTGTATCAATGCCAAGAAATGTATGTATACTTCACACAGTTACTAATAATTACTATTATCAATCCCTCTTCATGATGCGAATGCTTTATGATAATATTAATCAATTCCTCTTCTTTAAATAGTCATATGTGATAGGTCCCCTGTATTCTGAAGCCACACCATTTCTGAAACTTAACATGTCTTACAGAAATTGTTCTAGAACTTTCCTGTGTTCCAAACCAACTTTGTTGAATGGTGTTCTAATTATTTGGATGGTCAATTTTGCAACATATCTCTAAACTATACATGGAATTAATACTTGGTTTGTTCGACTGCTTAGTTTTGCTGCACATATATTCTATAGTTGCTTTCATGATCTAATCCTGGACTCCTATTCTAACCACTGGACCCTTGTTGCTTTCTAATATCCTGAGTAGAACAACATATAAATGTTTCATTTAACAATAGTAAGCTCATGAACCTGTAAAAATCTTTGATCGCCGCTACACTGCTTCATTTATTCATAGATCATACCAGTCTTCTAATATTGATGGTGATGTTCTGTTCCAGCTCCTTCCACCTGATGCTGCTAACAGGGAGAGCTGCTGGTATGGTTTCATGTGCCGAACCCAGCACCACCGGCCTGACCATGCTAAGAAGCTCAACCATGTCTGTCGTCCAACAAGAGGCAACCCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034906

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA034906&oldid=36882"