BGIOSGA034925

From RiceWiki
Revision as of 08:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034925| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034925, complete gene.| tag = OS11G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA034925

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034925, complete gene.

LocusTag

OS11G0181100

Ensembl Transcript ID

BGIOSGA034925-TA

Ensembl Protein ID

BGIOSGA034925-PA

Length

5873

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3878269..3884141

Sequence Coding Region

3878269..3878379,3880431..3880623,3880743..3880847,3880970..3880987,3881081..3881169
,3881246..3881398,3881576..3881710,3882063..3882229,3882951..3883045
,3883189..3883562,3883725..3883998,3884074..3884141

Genome Context

<gbrowseImage1> name=IndicaChromosome11:3878269..3884141 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:3878269..3884141 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCATCGCCGCGGCGGCCACCACCTCCACCTCCTCCTCGCCGCCGCCGTCGTCCTCCTCCTCACCGTCGCGGGGCTGCCCCTCGCTTCCGCCTCCGAGTCCGACCACAAGTACAAAGCTGAAGAAACAGTTAAACTCTGGGTAAACAAGGTTGGCCCGTACAATAACCCGCAAGAAACTTACAACTATTACAGCCTCCCATTTTGTCAGCCATCTGAAAACCCCGCACACAAATGGGGTGGTCTCGGAGAGGTCCTTGGCGGCAATGAGCTGATCGATAGTCAGGTTGATATAAAGTTTTTAAAAAATGTGGAGAAGGGTCCCATTTGCACAATTGAACTTGATGACAACAAGATTCAACAATTTACTGATGCCATTGAAAGGTCATATTGGTTTGAACTCTTCATAGATGATCTTCCATTATGGGGTTTTGTTGGTGAGACTGACAAAAACAACGAAAATAAGCACTACCTCTACACACACAAGAACATTGTTGTTAAATACAATGGTAACAGGATAATTCATGTCAATCTTACTCAAGAGTCACCTAAGCTTCTTGAAGCTGGCAAAAAATTGGACATGACCTATTCAGTGAAGTGGGTGCAAACAAACGTTGCATTTGCACGACGTTTTGAAGTTTACTTGGACTACCCGTTCTTTGAACATCAGATCCATTGGTTCTCCATCTTCAATTCGTTCATGATGGTTATTTTCTTGACTGGATTGGTATCAATGATATTGATGAGGACGCTGAGAAATGATTATGCGAAATATGCTCGTGAAGATGATGATCTGGAGTCGCTTGAAAGAGATGTTAGTGAGGAATCTGGTTGGAAGCTTGTCCATGGAGATGTTTTCCGGCCTCCTCGTAGCTTGGTGTTTCTTTCTGCTTTTGTTGGTATTGGCACTCAGCTGGCGGCTCTTATTCTGCTCGTGATTGTATTGGCCATTGTTGGCATGTTATATGTTGGACGAGGAGCTATCATCACGACCTTCATCGTGTGCTACGCCCTTACATCTTTCATTTCTGGATATGTTAGTGGTGGCCTCTACTCAAGGAATGGCGGCAAAAACTGGATAAAGTCTATGATCCTTACTGCATCCCTTTTTCCGTTCTTGTGCTTTTCGATTGGATTGGTGTTGAACACCATTGCTATCTTCTACCGTTCACTGGCAGCCATACCATTTGGCACAATGGTTGTCATATTTGTCCTGTGGGCTTTCATCTCTTTTCCTTTGGTTCTATTGGGAACTGTAGTTGGTAGAAATTGGAGTGGTGCTCCCAACAATCCCTGTCGTGTTAAGACAATTCCACGTCCTATTCCTGAGAAGAAGTGGTATCTTACACCCTCTGTTATCTCATTGATGGGTGGACTACTCCCCTTCGGCAGCATCTTCATCGAGATGTACTTTGTGTTTACTTCATTCTGGAACTACAAGGTTTATTATGTATATGGTTTCATGCTGCTGGTTTTTGTTATCCTTATAATAGTCACCATATGTGTCACTATTGTGGGTACTTATTTCTTGTTGAATGCTGAGAATTACCATTGGCAATGGACATCATTCTTCTCCGCTGCATCTACTGCCTTGTATGTCTACCTATACTCAATATACTATTATCACGTGAAGACAAAGATGTCTGGCTTCTTCCAGACAAGCTTCTACTTTGGCTACACCTTGATGTTCTGCCTCGGACTAGGAATTCTTTGCGGTGCTGTTGGCTATCTAGGATCTACTCTCTTTGTGAGGAGAATCTACAGAAACATCAAATGCGACTAA</cdnaseq>

Protein Sequence

<aaseq>MHRRGGHHLHLLLAAAVVLLLTVAGLPLASASESDHKYKAEETVKLWVNKVGPYNNPQETYNYYSLPFCQPSENPAHKWGGLGEVLGGNELIDSQVDIKFLKNVEKGPICTIELDDNKIQQFTDAIERSYWFELFIDDLPLWGFVGETDKNNENKHYLYTHKNIVVKYNGNRIIHVNLTQESPKLLEAGKKLDMTYSVKWVQTNVAFARRFEVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAREDDDLESLERDVSEESGWKLVHGDVFRPPRSLVFLSAFVGIGTQLAALILLVIVLAIVGMLYVGRGAIITTFIVCYALTSFISGYVSGGLYSRNGGKNWIKSMILTASLFPFLCFSIGLVLNTIAIFYRSLAAIPFGTMVVIFVLWAFISFPLVLLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFVILIIVTICVTIVGTYFLLNAENYHWQWTSFFSAASTALYVYLYSIYYYHVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSTLFVRRIYRNIKCD</aaseq>

Gene Sequence

<dnaseqindica>1..111#2163..2355#2475..2579#2702..2719#2813..2901#2978..3130#3308..3442#3795..3961#4683..4777#4921..5294#5457..5730#5806..5873#ATGCATCGCCGCGGCGGCCACCACCTCCACCTCCTCCTCGCCGCCGCCGTCGTCCTCCTCCTCACCGTCGCGGGGCTGCCCCTCGCTTCCGCCTCCGAGTCCGACCACAAGGTGCGTTGTCGCCCGCTCCCCCACCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCTTCCCTTCACCCTAGATCCGAACCCCCGACGTGTTCCTCACGCTGGATCCGCCGAGTCGCCGCGCTGGATCTAGGAGCGGCGGCGCGGTTTCGGTAGCTTTGGGTTCCGTGGCCGCTTTGCTTTGGGCGAGTGCTGCGTGGTTCGAGGTGCAAGGTTGATCTTAGCAATATGATAGGAAGGGCTGGACAGCTAGGAATACGGAAGCTATGGGCTGGAGGATTGGTTCGAAGGCTGTTCTAAAGGCTTGCTACTTGATGATCTTGTTTGCCATGAGAGTGAAGAAAAAAATCATTAGTGGAAACACATTTGGTAGAAAAAACGTTTTTGGTGCTGTAGTGCTTCGATTAGCTTGTTATTTGAGCAGACAAGCCACTGCAATTGTATTGCTGTTCAAATAATCTGTATCATGCTAGGCCTTTGAATAAGACTATGACAGCAGACTTTTCCTGCCTTAGCTTCACATCATCAAAATTTTGACCTTTTGGTGGCGCATCAAAATGCTGAGATGCGAAGCATTTCATGCTTGGGATACATGAAGCGCACACTGTTGTGGGCTTGTTACAGTTGATTTATTATCCTTTGGCGCCTTGACGGGGCAGTTATCCTTGTCCTTGCTGCGTCTTGAATGTTTTCATTAATTCTTTTTTCCTATTTTGGCAAAGCTTCCCAATGTCGGGGAGCTTACTAGTTGAACGTGTAATAATGGCATGCAGGGGTGGACCTGGGAACATACATTCTGGGTCAATGCCAATGAGCAAAAAAGGAGCTCCTGTAACACGGTGTTCACGAATCTCGAAATCCCACTCTCACATGCAGCCATCGAAAGAGACAAGAGAAATAACTAATATTTAATATTACCTTTATGGCTGTTTTTTAGGTCCGCTATTCTATTTCCCTTATGCTTTGTTGGATTTGAAATTAAGTTACTAGTTCTAGATTATATGGCTATGCAAATCCCAAAAAGACTTTTTATATTGGTTGAACCATTGAAGCCAAACTTTGTGAGGTGATCCTGGAATACTTATAGCAATATTTTTGTCAGGTGTTCTAATGCATTTTAGCAGTCGACGAATTTTCATGTGATCGAATAAGACTTGGTTGACATTGTGGTTTCTGTACAAGAACTTTTGGCACACTAGATTTGGATAAAATTATCATTCTTAGAATCATAATGATAGAATTCTGTTAGATAAGGTAAGTATACTCTGTAGTGTAATTACATGGCTCTCTAGTTTGATGTGGAAATCTGAAACTGAGTGTGAGTCTATGTCTCTCTTTGATTGTGTTCTGTTATGCTGCACTCATGAACTGTGATATGGGAAATTTTTTTTTACCGAAAGTCTATGCTTCTTCTAGTAAGTATTGCTGTTACTATTCTAAAAGGAAATTTCCAAATAAGCAATAACATATGGAACTTGCATCCTGGAATCCACCTAAGAGGCAAACAGAGACTAAGGATGCAGTTTTCTAGCTGAAAGCTGAAATACTGATTTCTGTCAAGTCTATGTTACATATCTACATTAAAAAAAACTCAGGTATCTAATTATCAATTTAAAGGATGATTTAATAATCATCTCTAAAAATGAGAAAATTGCATGAGAACTTTGGCTATAGTTTTTTATAGAACACATTTCATCGTGGTTGATATTGAATGTATTGAACAGTCTAAATTCTTCGTGAAGCATGGAAGAGCCTGCAAAATAAGCAAGTTAGGAACTTAGGATGAACCTTAAGGCGTTATTTTCAATTTGGTCATTCTTCTTAACACTATCACAAACTGGTCATGATCTTTGTTATTCTCTATAACTTAGAAAATTGCACTTCGTACCAGTATACAGATTCAGAAGTTTTGAGTGTTACTGTTTAACTTTATTGTCGCTTAGTTGCCATTTCTAAAAACTAAAAGCCTACTGATTTGTAATCACACTGAGAACAACTTTTGTATGTTAGTAATCACTTCATCTACCTGTTATTTAATTTTATGCAGTACAAAGCTGAAGAAACAGTTAAACTCTGGGTAAACAAGGTTGGCCCGTACAATAACCCGCAAGAAACTTACAACTATTACAGCCTCCCATTTTGTCAGCCATCTGAAAACCCCGCACACAAATGGGGTGGTCTCGGAGAGGTCCTTGGCGGCAATGAGCTGATCGATAGTCAGGTTGATATAAAGTTTTTAAGTAAGTTGATCTTTTCATACCCTCCTTGATTTTATTTACTTTTGGAATGTGCATCAATGTATGTTCCTTGCAACTAACCGATTTCCCTGACCATTTTACATTAAACTTCTTTGTTTTAGAAAATGTGGAGAAGGGTCCCATTTGCACAATTGAACTTGATGACAACAAGATTCAACAATTTACTGATGCCATTGAAAGGTCATATTGGTTTGAACTCTTCATAGGTATGAATCTGCATTTGATTGGGCATTGTTTTCTTATTTTGTATGCTATTTCTCATTTCTGAGTACTGACATTCTTTTTATCCAACTATCTCTGCATTGCTTTCTATTGTCCAACCGCCTAGATGATCTTCCATTATGGGGTAACAAATTCTAAACCTAAATGACATTTCTTTTGCTTTAACACTTTCTACCCTCTACCTCTCTTGAATAACATGCAAGTTGCCTCTGAGCAGGTTTTGTTGGTGAGACTGACAAAAACAACGAAAATAAGCACTACCTCTACACACACAAGAACATTGTTGTTAAATACAATGGTAACAGGGTATGTGCTGGTCTGCTTTAAGACCTTAAAATATTAGCTGAAACCTATTATACTGGCTAATTATTTTTTTTTGCAGATAATTCATGTCAATCTTACTCAAGAGTCACCTAAGCTTCTTGAAGCTGGCAAAAAATTGGACATGACCTATTCAGTGAAGTGGGTGCAAACAAACGTTGCATTTGCACGACGTTTTGAAGTTTACTTGGACTACCCGTTCTTTGAACATCAGGTAATCTTTGTTCGAACCAACATTACTTTTTATGTCTTTTGCTGGACAGTTTTTGTGCTATAATTTACTTTGCTCTGTGGTGGTTTTGACAAAGTGGTAGACTTTATTTTCTTTAAAACTCTCGAGGAATTGAAATTTACAAGAAAACTAAGTTCTGCTGCAACCTTCCATGTTCAGATCCATTGGTTCTCCATCTTCAATTCGTTCATGATGGTTATTTTCTTGACTGGATTGGTATCAATGATATTGATGAGGACGCTGAGAAATGATTATGCGAAATATGCTCGTGAAGATGATGATCTGGAGTCGCTTGTAAGTACTGAACGTGAAGCCTCACGCTTACAATCACTTGTGTATTCCCTCTGGTAGCAGGAGTCATTTTTTGTTTACTTTAATGGTCTTTGAGATGTAATCTTATTTTTGAATTTCATAATGGATTTTACAGTGAATCTACTCATCATTTTCATGTAAGCAATCTAATATTCAACAAAAGTAAACTAGTCAAACATCAAGTTTTACAGTACCCTCCTGATAATGATAACTTTTGTGTGTGTGTGTGTGTGTGTGACTGGACGAATTATTTGAATATTCATAGCAAATCATTTTGCATTATTTTCATCTAATCTCTTGATAGTTTTGTTAACTTATATTTTTCTTTTATCAGGAAAGAGATGTTAGTGAGGAATCTGGTTGGAAGCTTGTCCATGGAGATGTTTTCCGGCCTCCTCGTAGCTTGGTGTTTCTTTCTGCTTTTGTTGGTATTGGCACTCAGCTGGCGGCTCTTATTCTGCTCGTGATTGTATTGGCCATTGTTGGCATGTTATATGTTGGGTAAGCTCTAAATCAGCTTTCTTAGTATCCTTTTTTTCTGCATCGCATGTGCACATGTATTAGGCATAGAATACGCACCCTTTGGATTGAAAAATGGAAATATGGGCAATACGAGTGGAGTCTTTGGTAGGGCAATATGAAAGGCCCTAAGTGACAATACAGTTGAAGGTACTTTTGGAGCCATTAATATGCTTGTCTGGAACATCACTAATTGCACAACCCTAATTTCTACAAGGTGACGGATACTCGAATAGATGGACAATGACACAATAGTATAAGCATGGTATATTTTATACCTAGAGATGCCTTTGACCCCATTATTAATTTTGATTTCAACCTCATTGCTATATAATATGGCTTATTTGTTTAGTCCGATTACAACCTCTGTTAAAACTCATCCACGCTGCCTTCTGGAGCAGTGGTCTCTTTATATCAGCGGGCTCAACTCTATCTACCATAAGACATTGGTGAAATAAGTGTACTGCTTTCATTACCATATGGAATAATGTTATAGTCAGATAATATGACTATGAATTTCCAATGTCATTTTTCCTAACTAAAATATCATACTCAACTTGCCAGACGTAGCTTACCATTACATCTGTATTGTGTACTACACTGTTTTATCTTTCATTTCTGGATTGACAATAATCAGTAATGTTTGTTCAGCTAGCTAGTATTTCTTTGCACCCTACTAAATGCTGTACTTCTTATTTGTCAGACGAGGAGCTATCATCACGACCTTCATCGTGTGCTACGCCCTTACATCTTTCATTTCTGGATATGTTAGTGGTGGCCTCTACTCAAGGAATGGCGGTATGTTTCTATATATATAGTTTTTGTTGTTGGACTTGCCCGTTTTATTCTACTATCCTGAAATAGATTATTCAGTTTTGAAATGTTTCAATTTCTGTGTTTCTTATCTACTGTTCACTGAATCCATTTCTGATCCATGGCAGGCAAAAACTGGATAAAGTCTATGATCCTTACTGCATCCCTTTTTCCGTTCTTGTGCTTTTCGATTGGATTGGTGTTGAACACCATTGCTATCTTCTACCGTTCACTGGCAGCCATACCATTTGGCACAATGGTTGTCATATTTGTCCTGTGGGCTTTCATCTCTTTTCCTTTGGTTCTATTGGGAACTGTAGTTGGTAGAAATTGGAGTGGTGCTCCCAACAATCCCTGTCGTGTTAAGACAATTCCACGTCCTATTCCTGAGAAGAAGTGGTATCTTACACCCTCTGTTATCTCATTGATGGGTGGACTACTCCCCTTCGGCAGCATCTTCATCGAGATGTACTTTGTGTTTACTTCATTCTGGAACTACAAGGTAAAGAAAACATATCAGTGAACACTAATGTGCTTCTCAGTTCTCACTTCTCAACAAATTATTTTGCTAGAACAGATGGCATTTACAGTAGATGTGTACCAACCTAAAACTCTTTTTAATTTGATGGATAGATAGTAACCCTATTTCTTTGGTATTTGGCAGGTTTATTATGTATATGGTTTCATGCTGCTGGTTTTTGTTATCCTTATAATAGTCACCATATGTGTCACTATTGTGGGTACTTATTTCTTGTTGAATGCTGAGAATTACCATTGGCAATGGACATCATTCTTCTCCGCTGCATCTACTGCCTTGTATGTCTACCTATACTCAATATACTATTATCACGTGAAGACAAAGATGTCTGGCTTCTTCCAGACAAGCTTCTACTTTGGCTACACCTTGATGTTCTGCCTCGGACTAGGAATTCTTTGCGGTGAGCATTTAAACTTGTATTCATTGTATTTCAAATTGCCACTTGGTCTGTTTTGACACCACGTCTTTGGTTTAGGTGCTGTTGGCTATCTAGGATCTACTCTCTTTGTGAGGAGAATCTACAGAAACATCAAATGCGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034925