BGIOSGA035008

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Revision as of 09:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035008| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035008, complete gene.| tag = OS11G02...")
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Gene Name

BGIOSGA035008

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035008, complete gene.

LocusTag

OS11G0216000

Ensembl Transcript ID

BGIOSGA035008-TA

Ensembl Protein ID

BGIOSGA035008-PA

Length

5664

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5549418..5555081

Sequence Coding Region

5549418..5549486,5550042..5550138,5550237..5550334,5551278..5551433,5551730..5551807
,5551879..5552010,5552600..5552680,5553186..5553254,5553341..5553430
,5553745..5553889,5553962..5554050,5554128..5554223,5554305..5554372
,5554448..5554547,5554654..5554710,5554923..5555081

Genome Context

<gbrowseImage1> name=IndicaChromosome11:5549418..5555081 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:5549418..5555081 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGGGCGCCAACATGCTCCTGGACGAGCCCGTCCGCCTCACCTCCGTCCTCACCCCCGTCAAGCCCAAAGTATTCCCATCACTCACCAAGATTGTTGGGACCCTTGGGCCCAACTCACACTCCGTCGAGGTTATTCAAGAATGCCTCACTGCTGGGATGGCAGTCGCACGGTTTGATTTCTCATGGATGGATGCTTCATATCATCAGGAGACCCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGTGCCCTGTAATGCTGGATACACTGGGTCCAGAAATTCAGGTTCACAATTCAACTGGTGGACCAATTGAGTTGAAAGCTGGAAATCATGTCACCATAACACCAGATCTTTCTAAAGCTCCCTCTTCTGAAATCTTGCCAATTAAGTTTGGTGGTCTTGCAAAAGCTGTCAAGAAGGGTGATACTCTTTTTATTGGTCAATATCTCTTCACAGGAAGTGAAACAACATCTTCGTGGCTTGAGGTTGTGGAAACTTCTGGAGAAAATGTTGAATGTCTTGTGACCAATACAGCTACACTTGCAGGCCCCATGTTCACTTTGCATGTTTCAAAAGCCCATGTCAGTTTACCAACTTTGAGTGATTATGATAAAGAGGTCATTTCAACTTGGGGATTACATAACAGTGTTGATATTATATCACTTTCCCATACCCGCTCTGCCGAGGATGTCAGGGAGCTTAGATCTTTTCTTCAATCTCATGGCCTTCAGGACACACAGATATATGCCAAGGTTGAAAATACTGAGGGTTTGGATCATTTTGATGAAATTCTCCAAGAAGCTGATGGCGTCATTATTTCACGGGGAGACCTGGGAATTGACCTTCCACCAGAAGATGTGTTCATATCCCAAAAAACAGCTATTAAGAAATGCAATCTTGCTGGCAAACCTGTGATCATCACTAGAGTTGTGGACAGCATGATTGACAATCTACGCCCAACACGTGCAGAGGCCACTGATGTTGCAAATGCTGTCCTAGATGGAACGGATGGCATTTTGCTTGGTGCGGAGACTCATCGAGGCCCTTATCCAGTTGATGCAGTGAGTACTGTTGGGAGAATATGTGCAGAAGCTGAGTCTGTGTATAACCAGTTGGTTCACTTCAAGAAATTAGTGAAGCATGTAGGTGATCCAATGCCCCATGAAGAATCTGTGGCATCTTCAGCGGTTCGCACTGCAATGAAAGTAAAAGCTGCTGCAATCGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTTAGTTGCCAAGTACAAGCCACCAATGCCAGTGTTGGCCGTTGTCTTCCCACGTGAGGGCTCTGATCCAACAAAGTGGCGTTCTTACGGCACAACTCAGGCAAGGCAATGTTTTGCTGCAAGAGGTGTCTACCCTTTGATGGCGAGTACTGAGGAGGCTGAAACTGGTGGGCTCACCAGGGAAGAGTACGGGATAAAACTTGCACAGAACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAA</cdnaseq>

Protein Sequence

<aaseq>MQGANMLLDEPVRLTSVLTPVKPKVFPSLTKIVGTLGPNSHSVEVIQECLTAGMAVARFDFSWMDASYHQETLNNLRKAAQNVNKLCPVMLDTLGPEIQVHNSTGGPIELKAGNHVTITPDLSKAPSSEILPIKFGGLAKAVKKGDTLFIGQYLFTGSETTSSWLEVVETSGENVECLVTNTATLAGPMFTLHVSKAHVSLPTLSDYDKEVISTWGLHNSVDIISLSHTRSAEDVRELRSFLQSHGLQDTQIYAKVENTEGLDHFDEILQEADGVIISRGDLGIDLPPEDVFISQKTAIKKCNLAGKPVIITRVVDSMIDNLRPTRAEATDVANAVLDGTDGILLGAETHRGPYPVDAVSTVGRICAEAESVYNQLVHFKKLVKHVGDPMPHEESVASSAVRTAMKVKAAAIVVFTFSGRAARLVAKYKPPMPVLAVVFPREGSDPTKWRSYGTTQARQCFAARGVYPLMASTEEAETGGLTREEYGIKLAQNYGRSVGMLKPYDRLIIFQKIGDSSVVKIIECDSS</aaseq>

Gene Sequence

<dnaseqindica>1..69#625..721#820..917#1861..2016#2313..2390#2462..2593#3183..3263#3769..3837#3924..4013#4328..4472#4545..4633#4711..4806#4888..4955#5031..5130#5237..5293#5506..5664#ATGCAGGGCGCCAACATGCTCCTGGACGAGCCCGTCCGCCTCACCTCCGTCCTCACCCCCGTCAAGCCCGTAAGCGCCGCTCCTCCCCCTGCCCCTCCCCTCTCGTCTCCTTCCGTTTCGGTTCATTTCCGGTCGATCTCGCGCTCGATGTCACGCTCCGCTGCGCGGAATGGTGACGAGCGGCGGGTTCGGGGCACTCTCCATCTGTGGGGGTGGTGAATACTGAATCGATTTTTTTGTTTTGGTTTGGTTGGTTCGGTGTTCGATCCGATTTGGTGTGCGGGGGAGGGGTGGGGTTCGTCGAGATGTGAGATACATTTCGTCAGAATGCGATTTGCGGACGAGCAGCGGACCTGCCGGATTAGGGGGGAGTTTAATGTTGCGTGCTGTTACTTGTGATCGCACGATTATTTTAAAAAAATGCCGTATATTTTTTTTCATGTGGAATTAATTTGTATTATTTGCAATTGCAATGTGGGGATTTGATGCGTGGAAGGATTGGGGGTAGTATGGCTGCCCTGATTTTGACATGTAACACTGGATTGATTTGATTTTGACATGTCACAGTGAATTGATTTTGAGCATGATGGATGTCATCTTTACGCCTTGTCCTGTGTATTGCAGAAAGTATTCCCATCACTCACCAAGATTGTTGGGACCCTTGGGCCCAACTCACACTCCGTCGAGGTTATTCAAGAATGCCTCACTGCTGGGATGGCAGGTTGGACTCGATTTAGTGCTGGGGGCCTGCTCTTGATTTGTTTTCCCCTCCTTTTGTTACGAAAAATGATGATGCTCTCTTTATGTTTTGTTTTGCAGTCGCACGGTTTGATTTCTCATGGATGGATGCTTCATATCATCAGGAGACCCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGTGCCCTGTAAGTTGACGGCATGACAGAAATGATTGGCAGTAACTTTTGGCGCAAATACTTTGATACGCTTAGGCAAATAGGATTTAGGATATATAAAATGTGCCTATTTGATCCTTTTGTGTTACTTTATCAATTTACTTAACAGTGACTTGGTGGCATGTTTACAGTTTACTAAAAAGATCAGTTTCCATCATTAAATGTGATATGTTTTTCTATTATTTAGGTTTTAGTTTCAATAGTTAACATCAGTATCTGTGAACTCATTTTGATTTTCTTATGGGTATTTGTAAATGCTTGGATATGTAAACATTGCTTTTTCTTTAATTACTACCCAGTATCCCACATACTGTATGTCTTTCTTGAGATGCTGTTATATTTCTCTGTTCCTATTTAATTAGTTATTGTCAAGTGTTTTATGCTGTTAGGTACAAAAACTGCGCAAAATGCTTCCTGTTGTAGCTCTATTCCTTGGAGATATGCCTTTACCAAAGATTCCATTTCTTAGTTCCATGTGAATGCAATTCCAATATATTTGCCTTGAGCTTCTGAATAATAATTTTTCAGTGAAAACTAAATTTGGCCAACTTTCTCCATTTGGGATGCATATTGTACTACTTCATGTAGAGATTTATGTTGCTTAGATTTATGCTAGTTTCCTCGTTTGATTTTATTAAAACAATGTTACCAGAAATGGTGTAGTGAATGGTGAAGTTTGAATTTCATATATTTTTGAATATCTGGTGTTCCGAAGACTTTCTAATCTAATTGACAATCTGTTATTGTGTCCTCATTTTTAATGATCACAATTTACAAATCCACATGTTTGAAAGTTCATGCCTTTTGTTATTCAGTTGTACTATCCGATATTTCTGCTTTCTCCTTTTAAGTTAAGATTTGTGCTAAGAGGCATATCCTATTAACTTCTAACTAATTTTAATACACTATATAGGTAATGCTGGATACACTGGGTCCAGAAATTCAGGTTCACAATTCAACTGGTGGACCAATTGAGTTGAAAGCTGGAAATCATGTCACCATAACACCAGATCTTTCTAAAGCTCCCTCTTCTGAAATCTTGCCAATTAAGTTTGGTGGTCTTGCAAAAGTAAGTGAGCAATATGGGAAAATGAAGATGCGAATTATGATATTACTGTTAATACTTGTCATATTGCAACATTTATCATATGATTTTCTATCGAAGGGCCTCTTTTGATTTTGTGTGATTCATGCAAGAATGCTGTCATTAAAATAATTTTCATGGATACTTGTGCAAGAGTTAAAAGGCTTTTGTCTTTTCAATTACATCTATTAAAATACTTGTATTGACTTTGTTTTCTTCTACCTCAGAAACCTTTATTCTTAAAATATTGCATAGTGAATTGTTTCTTTGTGTATATACAGGCTGTCAAGAAGGGTGATACTCTTTTTATTGGTCAATATCTCTTCACAGGAAGTGAAACAACATCTTCGTGGCTTGAGGTGTGCAAATTTGTATTTCTTTGACTTCATACCACTTTTCAGTACATCTCCTTATGTGCTGTAATTTACAGGTTGTGGAAACTTCTGGAGAAAATGTTGAATGTCTTGTGACCAATACAGCTACACTTGCAGGCCCCATGTTCACTTTGCATGTTTCAAAAGCCCATGTCAGTTTACCAACTTTGAGTGATTATGATAAAGAGGTAAGGGGACTACTGGGCTTATTTACGTTACAGAAAATAAATTTGAATTTTTTGGCATGTTACATGTGGCTGACAGATTACTTTTGTATAGAAACTTCTTTGGCAATTGGAAGCAGAATTTGTTAAGGAGTGCATTTTTTTGAAAGTTTTTCTTACCAATTCTCAACCAGTGAAAGCTATGGCCTGTTCAGAAAGAAAACCAATATGTTTATGATGCCATTGTAGTTAAAATATTGCAAATATCAAATAATTTTGCTGGATGTAAAAACATCTGTCTTAGTGCATTTTAGCATGCTGTTCATTTTTTCCCTTTATGCTCAAACCTTTTAATAAGCCCAGTAGTTCCAAGTCACTAGACTTTTAATAGGCTTTGCCAAAGTTAAAACTTATTAAGGGCCAATGAAGTGTATTGCAATCCAAAACAATTAAAAGAGAATTTCTTTCAAGATCATTGTATGATTATCTCTCAAGTTGCATATTTGACACATAATTGCATATTTCAATGATGCATGATGCACAATTCTGTTTTGATGCAATTATATATATGTACCTTCTCAAAATTGTTCTAAGTACAGTTTCCTTGCAATAGGTCATTTCAACTTGGGGATTACATAACAGTGTTGATATTATATCACTTTCCCATACCCGCTCTGCCGAGGATGTCAGGGAGGTGAGCTTTCTTTCCCTGATTGTGCCACTATTGCACTTGAATTCATTCTGTTGATCATCTATGTGCTTCTTGATTTCCTTGTATTGTTCATTTAGTTCATTATTAAGTGGTTTTTTTTATGTTATAGCTTTAACTCACAAAAGATCAATTTGCAAGAAGTTTTTGATGTAAACTCGGCCAATTGAACTGTTGGTTCTTGGGTTTAATGAAGGGCCATCTATATGTACATGCATCCTGAACGTTGACAACAATTGACAGTACACTCACATCAGAGGGGAAAATTTTAACGAACTGTATCAAGCATTATTGCAGACAATGAAGAACTGCATGATGTTATTTGTTTTTCAATTTTATGTGTTATATTTCATAGACATGGTGTTACTGGTTCTCCCTGTACCTGTGACCACATGTTTCCCTTAGCATCTAAGCTATTTGTGCATTAAATCTTGATATATACAATAAAGTTGTGCAACACCACTGATCCTTACATATATTTGGCATGCAGCTTAGATCTTTTCTTCAATCTCATGGCCTTCAGGACACACAGATATATGCCAAGGTTGAAAATACTGAGGTATTTACCCTGCTTCTATGAAAATATTATTGTCAGGCTTTTCACTTCCCTCATTACAATTAACTGCATTGCTTATTCCTTTCTAGGGTTTGGATCATTTTGATGAAATTCTCCAAGAAGCTGATGGCGTCATTATTTCACGGGGAGACCTGGGAATTGACCTTCCACCAGAAGATGTAAATTATTTTTTTCCTCAAAACCCCATTATACACTATTTATCCCTATCATGCTGTTGGACATGTGCATATTCATTTTATTCATGACGCCTTGCCAATAGTAGTTATGAGAATATCTTCATTATTCTGGTGCAAAATCTTATCATCAATTGCTTATCAAGTTACGCTTTAAGTGATTCATTCTTCTCTGATAGGCTGTTGATCCATCTGAAATTTTAGTGCATGAACCGTTGTTCTGTACTCATAATTTGGAAAAATGTCATGATTACATGCCTTGCTTCATACCATGACCTCTCTCACTCTTGGAACTTCAGGTGTTCATATCCCAAAAAACAGCTATTAAGAAATGCAATCTTGCTGGCAAACCTGTGATCATCACTAGAGTTGTGGACAGCATGATTGACAATCTACGCCCAACACGTGCAGAGGCCACTGATGTTGCAAATGCTGTCCTAGATGGTCTGTAAACCTGTATTATATTACAACAAGTTGACAAATTTGTTACTTTCTCTTATACTGCAAAAATGGCAGGAACGGATGGCATTTTGCTTGGTGCGGAGACTCATCGAGGCCCTTATCCAGTTGATGCAGTGAGTACTGTTGGGAGAATATGTGCAGAAGTATGTTTCTTTCTGTCCATCAATATTGCAATAGAGCCATCCAAATTTCTTGACTGATCAATGGTAAATGCTTGTAGGCTGAGTCTGTGTATAACCAGTTGGTTCACTTCAAGAAATTAGTGAAGCATGTAGGTGATCCAATGCCCCATGAAGAATCTGTGGCATCTTCAGCGGTAAACACTCTTAATTCATTTGGAACAGATACTACTTTGCTATCAAGGATTTATTGTGATAATCCATTTTTTCACTTGTAGGTTCGCACTGCAATGAAAGTAAAAGCTGCTGCAATCGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTACTCCACAATTAACTCCTTTCAAGCCTCCATCATTCAAGTGCTATTAATTCACTTCATGCATCCTGTCTGCAGGTTAGTTGCCAAGTACAAGCCACCAATGCCAGTGTTGGCCGTTGTCTTCCCACGTGAGGGCTCTGATCCAACAAAGTGGCGTTCTTACGGCACAACTCAGGTAAGTAACATGTATATCTATAATATCTGTCTGGGTTTTACAACAATCTTTCATTTCGTGGAACAGAATATGCCAACTTATTTTACCACTTCTATGTTGCTTTCAGGCAAGGCAATGTTTTGCTGCAAGAGGTGTCTACCCTTTGATGGCGAGTACTGAGGAGGTATGTTGAAGTTGCTAAATACTAGAGGCACCTTCACTTTCTGCTTTTTTGCAATGCCAAAACTTGCATCTTGCGGTAGCCCACAATGCAAATTTTCTTTGTAGTTCTACAAAAATGATAGCTGCATTATCCCCTCTTAATTACCATTTGGCATTTTTAAAATTTCAACTTGTTCTTAATATGTACATATGCGTGAACACTTTCTGTAACAGGCTGAAACTGGTGGGCTCACCAGGGAAGAGTACGGGATAAAACTTGCACAGAACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035008