Os11g0216000

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Revision as of 09:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0216000| Description = Pyruvate kinase family protein| Version = NM_001074039.1 GI:115484726 GeneID:4350078| Length = 5950 bp| Definition ...")
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Gene Name

Os11g0216000

Description

Pyruvate kinase family protein

Version

NM_001074039.1 GI:115484726 GeneID:4350078

Length

5950 bp

Definition

Oryza sativa Japonica Group Os11g0216000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:6042317..6048266

Sequence Coding Region

6042426..6042494,6043047..6043143,6043242..6043339,6044281..6044436,6044732..6044809
,6044881..6045012,6045602..6045682,6046188..6046256,6046343..6046432
,6046747..6046891,6046964..6047052,6047130..6047225,6047307..6047374
,6047450..6047549,6047656..6047712,6047925..6048083

Expression

GEO Profiles:Os11g0216000

Genome Context

<gbrowseImage1> name=NC_008404:6042317..6048266 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:6042317..6048266 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagggcgccaacatgctcctggacgagcccgtccgcctcacctccgtcctcacccccgtcaagcccaaagtattcccatcactcaccaagattgttgggacccttgggcccaactcacactccgtcgaggttattcaagaatgcctcactgctgggatggcagtcgcacggtttgatttctcatggatggatgcttcatatcatcaggagacccttaacaatctgaggaaagctgcacaaaatgtcaataagctgtgccctgtaatgctggatacactgggtccagaaattcaggttcacaattcaactggtggaccaattgagttgaaagctggaaatcatgtcaccataacaccagatctttctaaagctccctcttctgaaatcttgccaattaagtttggtggtcttgcaaaagctgtcaagaagggtgatactctttttattggtcaatatctcttcacaggaagtgaaacaacatcttcgtggcttgaggttgtggaaacttctggagaaaatgttgaatgtcttgtgaccaatacagctacacttgcaggccccatgttcactttgcatgtttcaaaagcccatgtcagtttaccaactttgagtgattatgataaagaggtcatttcaacttggggattacataacagtgttgatattatatcactttcccatacccgctctgccgaggatgtcagggagcttagatcttttcttcaatctcatggccttcaggacacacagatatatgccaaggttgaaaatactgagggtttggatcattttgatgaaattctccaagaagctgatggcgtcattatttcacggggagacctgggaattgaccttccaccagaagatgtgttcatatcccaaaaaacagctattaagaaatgcaatcttgctggcaaacctgtgatcatcactagagttgtggacagcatgattgacaatctacgcccaacacgtgcagaggccactgatgttgcaaatgctgtcctagatggaacggatggcattttgcttggtgcggagactcatcgaggcccttatccagttgatgcagtgagtactgttgggagaatatgtgcagaagctgagtctgtgtataaccagttggttcacttcaagaaattagtgaagcatgtaggtgatccaatgccccatgaagaatctgtggcatcttcagcggttcgcactgcaatgaaggtaaaagctgctgcaatcgttgtgttcactttctcaggaagagctgccaggttagttgccaagtacaagccaccaatgccagtgttggccgttgtcttcccacgtgagggctctgatccaacaaagtggcgttcttacggcacaactcaggcaaggcaatgttttgctgcaagaggtgtctaccctttgatggcgagtactgaggaggctgaaactggtgggctcaccagggaagagtacgggataaaacttgcacagaactatggtcgctcggttggtatgctaaagccctatgacaggttgatcattttccagaagatcggcgattcatctgttgtcaagatcatcgagtgtgacagttcgtaa</cdnaseq>

Protein Sequence

<aaseq>MQGANMLLDEPVRLTSVLTPVKPKVFPSLTKIVGTLGPNSHSVE VIQECLTAGMAVARFDFSWMDASYHQETLNNLRKAAQNVNKLCPVMLDTLGPEIQVHN STGGPIELKAGNHVTITPDLSKAPSSEILPIKFGGLAKAVKKGDTLFIGQYLFTGSET TSSWLEVVETSGENVECLVTNTATLAGPMFTLHVSKAHVSLPTLSDYDKEVISTWGLH NSVDIISLSHTRSAEDVRELRSFLQSHGLQDTQIYAKVENTEGLDHFDEILQEADGVI ISRGDLGIDLPPEDVFISQKTAIKKCNLAGKPVIITRVVDSMIDNLRPTRAEATDVAN AVLDGTDGILLGAETHRGPYPVDAVSTVGRICAEAESVYNQLVHFKKLVKHVGDPMPH EESVASSAVRTAMKVKAAAIVVFTFSGRAARLVAKYKPPMPVLAVVFPREGSDPTKWR SYGTTQARQCFAARGVYPLMASTEEAETGGLTREEYGIKLAQNYGRSVGMLKPYDRLI IFQKIGDSSVVKIIECDSS</aaseq>

Gene Sequence

<dnaseqindica>110..178#731..827#926..1023#1965..2120#2416..2493#2565..2696#3286..3366#3872..3940#4027..4116#4431..4575#4648..4736#4814..4909#4991..5058#5134..5233#5340..5396#5609..5767#tcgcctcgcctccgtttcgatttggggagagagagatagagaggcgatcgcatcgaggaggcgcaaaaaccctagaaggcgaaccttccggaagcttctggaagggaggatgcagggcgccaacatgctcctggacgagcccgtccgcctcacctccgtcctcacccccgtcaagcccgtaagcgccgctcctccccctgcccctcccctctcgtctccttccgtttcggttcatttccggtcgatctcgcgctcgatgtcacgcgccgctgcgcggaatggtgacgagcggcgggttcggggcactctccatctgtgggggtggtgaatactgaatcgatttttttgttttggtttggttcggtgttcgatccgatttggtgtgcgggggaggggtggggttcgtcgagatgtgagatacatttcgtcagaatgcgatttgcggacgagcagcggacctgccggattaggggggagtttaatgttgcgtgctgttacttgtgatcgcacgattattttaaaaaaatgccgtatatttttttttcatgtggaattaatttgtattatttgcaattgcaatgtggggatttgatgcgtggaaggattgggggtagtatggctgccctgattttgacatgtaacactggattgatttgattttgacatgtcacagtgaattgattttgagcatgatggatgtcatctttacgccttgtcctgtgtattgcagaaagtattcccatcactcaccaagattgttgggacccttgggcccaactcacactccgtcgaggttattcaagaatgcctcactgctgggatggcaggttggactcgatttagtgctgggggcctgctcttgatttgttttcccctccttttgttacgaaaaatgatgatgctctctttatgttttgttttgcagtcgcacggtttgatttctcatggatggatgcttcatatcatcaggagacccttaacaatctgaggaaagctgcacaaaatgtcaataagctgtgccctgtaagttgacggcatgacagaaatgattggcagtatcttttggcgcaaatactttgatacgcttaggcaaataggatttaggatatataaaatgtgcctatttgatccttttgtgttactttatcaatttacttaacagtgacttggtggcatgtttacagtttactaaaaagatcagtttccatcattaaatgtgatatgtttttctattatttaggttttagtttcaatagttaacatcagtatctgtgaactcattttgattttcttatgggtatttgtaaatgcttggatatgtaaacattgctttttctttaattactacccagtatcccacatactgtatgtctttcttgagatgctgttatatttctctgttcctatttaattagttattgtcaagtgttttatgctgttaggtacaaaaactgcgcaaaatgcttcctgttgtagctattccttggagatatgcctttaccaaagattccatttcttagttccatgtgaatgcaattccaatatatttgccttgagcttctgaataacaatttttcagtgaaaactaaatttggccaactttctccatttgggatgcatattgtactacttcatgtagagatttatgttgcttagatttatgctagtttcctcgtttgattttattaaaacaatgttaccagaaatggtgtagtgaatggtgaagtttgaatttcatatatttttgaatatctggtgttccgaagactttctaatctaattgacaatctgttattgtgtcctcatttttaatgatcacaatttacaaatccacatgtttgaaagttcatgccttttgttattcagttgtactatccgatatttctgctttctccttttaagttaagatttgtgctaagaggcatatcctattaacttctaactaattttaatacactatataggtaatgctggatacactgggtccagaaattcaggttcacaattcaactggtggaccaattgagttgaaagctggaaatcatgtcaccataacaccagatctttctaaagctccctcttctgaaatcttgccaattaagtttggtggtcttgcaaaagtaagtgagcaatatgggaaaatgaagatgcgaattatgatattactgttaatacttgtcatattgcaacatttatcatatgattttctatcgaagggcctcttttgattttgtgtgattcatgcaagaatgctgtcattaaaataattttcatggatacttgtgcaagagttaaaggcttttgtcttttcaattacatctattaaaatacttgtattgactttgttttcttctacctcagaaacctttattcttaaaatattgcatagtgaattgtttctttgtgtatatacaggctgtcaagaagggtgatactctttttattggtcaatatctcttcacaggaagtgaaacaacatcttcgtggcttgaggtgtgcaaatttgtatttctttgacttcataccacttttcagtacatctccttatgtgctgtaatttacaggttgtggaaacttctggagaaaatgttgaatgtcttgtgaccaatacagctacacttgcaggccccatgttcactttgcatgtttcaaaagcccatgtcagtttaccaactttgagtgattatgataaagaggtaaggggactactgggcttatttacgttacagaaaataaatttgaattttttggcatgttacatgtggctgacagaatacttttgtatagaaacttctttggcaattggaagcagaatttgttaaggagtgcatttttttgaaagtttttcttaccaattctcaaccagtgaaagctatggcctgttcagaaagaaaaccaatatgtttatgatgccattgtagttaaaatattgcaaatatcaaataattttgctggatgtaaaaacatctgttttagtgcattttagcatgctgttcattttttccctttatgctcaaaccttttaataagcccagtagttccaagtcactagacttttaataggctttgccaaagttaaaacttattaagggccaatgaagtgtattgcaatccaaaacaattaaaagagaatttctttcaagatcattgtatgattatctctcaagttgcatatttgacacataattgcatatttcaatgatgcatgatgcacaattctgttttgatgcaattatatatatgtaccttctcaaaattgttctaagtacagtttccttgcaataggtcatttcaacttggggattacataacagtgttgatattatatcactttcccatacccgctctgccgaggatgtcagggaggtgagctttctttccctgattgtgccactattgcacttgaattcattctgttgatcatctatgtgcttcttgatttccttgtattgttcatttagttcattattaagtggttttttttatgttatagctttaactcacaaaagatcaatttgcaagaagtttttgatgtaaactcggccaattgaactgttggttcttgggtttaatgaagggccatctatatgtacatgcatcctgaacgttgacaacaattgacagtacactcacattagaggggaaaattttaacgaactgtatcaagcattattgcagacaatgaagaactgcatgatgttatttgtttttcaattttatgtgttatatttcatagacatggtgttactggttctccctgtacctgtgaccacatgtttcccttagcatctaagctatttgtgcattaaatcttgatatatacaataaagttgtgcaacaccactgatccttacatatatttggcatgcagcttagatcttttcttcaatctcatggccttcaggacacacagatatatgccaaggttgaaaatactgaggtatttaccctgcttctatgaaaatattattgtcgggcttttcacttccctcattacaattaactgcattgcttattcctttctagggtttggatcattttgatgaaattctccaagaagctgatggcgtcattatttcacggggagacctgggaattgaccttccaccagaagatgtaaattatttttttcctcaaaaccccattatacactatttatccctatcatgctgttggacatgtgcatattcattttattcatgacgccttgccaatagtagttatgagaatatcttcattattctggtgcaaaatcttatcatcaattgcttatcaagttacgctttaagtgattcattcttctctgataggctgttgatccatctgaaattttagtgcatgaaccgttgttctgtactcataatttggaaaaatgtcatgattacatgccttgcttcataccatgacctctctcactcttggaacttcaggtgttcatatcccaaaaaacagctattaagaaatgcaatcttgctggcaaacctgtgatcatcactagagttgtggacagcatgattgacaatctacgcccaacacgtgcagaggccactgatgttgcaaatgctgtcctagatggtctgtaaacctgtattatattacaacaagttgacaaatttgttagtttctcttatactgcaaaaatggcaggaacggatggcattttgcttggtgcggagactcatcgaggcccttatccagttgatgcagtgagtactgttgggagaatatgtgcagaagtatgtttctttctgtccatcaatattgcaatagagccatccaaatttcttgactgatcaatggtaaatgcttgtaggctgagtctgtgtataaccagttggttcacttcaagaaattagtgaagcatgtaggtgatccaatgccccatgaagaatctgtggcatcttcagcggtaaacactcttaattcatttggaacagatactactttgctatcaaggatttattgtgataatccattttttcacttgtaggttcgcactgcaatgaaggtaaaagctgctgcaatcgttgtgttcactttctcaggaagagctgccaggtactccacaattaactcctttcaagcctccatcattcaagtgctattaattcacttcatgcatcctgtctgcaggttagttgccaagtacaagccaccaatgccagtgttggccgttgtcttcccacgtgagggctctgatccaacaaagtggcgttcttacggcacaactcaggtaagtaacatgtatatctataatatctgtctgggttttacaacaatctttcatttcgtggaacagaatatgccaacttattttaccacttctatgttgctttcaggcaaggcaatgttttgctgcaagaggtgtctaccctttgatggcgagtactgaggaggtatgttgaagttgctaaatactagaggcaccttcactttctgcttttttgcaatgccaaaacttgcatcttgcggtagcccacaatgcaaattttctttgtagttctacaaaaatgatagctgcattatcccctcttaattaccatttggcatttttaaaatttcaacttgttcttaatatgtacatatgcgtgaacactttctgtaacaggctgaaactggtgggctcaccagggaagagtacgggataaaacttgcacagaactatggtcgctcggttggtatgctaaagccctatgacaggttgatcattttccagaagatcggcgattcatctgttgtcaagatcatcgagtgtgacagttcgtaaaagattagacacctaccacattccgtccaagagtttcaaccacacagaggcggattacctttttgctttctttcttgtttgacatgatattgagactagaatagggaaggccaattgtgctgtttggcaatttacccattttaggtccatacttgctttttcaataatttcattcaagagcct</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0216000, RefSeq:Os11g0216000