Os11g0219400

From RiceWiki
Revision as of 09:04, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0219400| Description = Ankyrin repeat containing protein| Version = NM_001074050.1 GI:115484748 GeneID:4350092| Length = 8153 bp| Definiti...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0219400

Description

Ankyrin repeat containing protein

Version

NM_001074050.1 GI:115484748 GeneID:4350092

Length

8153 bp

Definition

Oryza sativa Japonica Group Os11g0219400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:6201425..6209577

Sequence Coding Region

6201635..6201790,6202567..6203049,6203382..6203762,6207159..6207206

Expression

GEO Profiles:Os11g0219400

Genome Context

<gbrowseImage1> name=NC_008404:6201425..6209577 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:6201425..6209577 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaccccctccgctcccgctcccggggatggaaactcggctcccgcatcatctcgggtgacgtttgaggatatgcttcgcagctgcgatcagagttattatcaaatgctcgggttccctgacgctgcttcctacttcgaggcaaaggagcggaatttgttggctcagtactcgcgtcaggtattccctctgctatggcctatactggagaaggatagcctcacgcgcttcaatcgactttgccaagggtggtcgcgcttgatgggccttcgtggtttcatttacccggagattctcagctccattgtcgccaacaacgctttgcgctgtgccagagtggccctgcaaggcagctctccgttgcgcggacgtcgtgccgatcccaacggcctccatccttatggctacacggctctccacctggccgctgagacgttcagcgtcgaaatggtcaagctcctcctccgccacggtgcgtcagcaaaccaccgcactgagggcgactacgtcattgagggcctcctgcctcttcacgtcgctgttgagaatgccagcatgcacaaatacctggaggacaattgggctgatggccactctcctaacaacctcatatctctcctctgtctgccagagatgaagatgtatttggacacaactagattaattgcccaacatacgcataacattgtcgatgagttgtgggattacatcgataagaagaagtttgtccagttagcaattttgctgctggcttctcagaagcagctccatggccccataaataggagccgtggcaaggctaatctgaatgggtttgaatctattagacggcgcacttatgaagctatcagtggcctacatctccagatgatagctatggtgaatgaggggaaaaatggcagtgcgcttaagaagctgaaagagaagaaggaagcccttcttacagcagacgcactagttggtattatagacaaagctggtcaagatcttgaggattatattcagactaactcagaggtcatcatggtcgtgccacgcgcgacctacgtggctagtgttatttga</cdnaseq>

Protein Sequence

<aaseq>METPSAPAPGDGNSAPASSRVTFEDMLRSCDQSYYQMLGFPDAA SYFEAKERNLLAQYSRQVFPLLWPILEKDSLTRFNRLCQGWSRLMGLRGFIYPEILSS IVANNALRCARVALQGSSPLRGRRADPNGLHPYGYTALHLAAETFSVEMVKLLLRHGA SANHRTEGDYVIEGLLPLHVAVENASMHKYLEDNWADGHSPNNLISLLCLPEMKMYLD TTRLIAQHTHNIVDELWDYIDKKKFVQLAILLLASQKQLHGPINRSRGKANLNGFESI RRRTYEAISGLHLQMIAMVNEGKNGSALKKLKEKKEALLTADALVGIIDKAGQDLEDY IQTNSEVIMVVPRATYVASVI</aaseq>

Gene Sequence

<dnaseqindica>211..366#1143..1625#1958..2338#5735..5782#gaccacgaggaggcgaccgccgccgcacctctcctcctcttccacgacgaggcgccggtctcgccggcggagcccagcatcgccggcagatccacgtcgagcatcgcggcaggagcaggacagggagaggccgaggacacagcgaaaggggatcgatcgatcgatcgatctagggttttttgagctccgccacccgccccctccttcccgatggagaccccctccgctcccgctcccggggatggaaactcggctcccgcatcatctcgggtgacgtttgaggatatgcttcgcagctgcgatcagagttattatcaaatgctcgggttccctgacgctgcttcctacttcgaggcaaaggagcgggtaggtacccagattatcccttctccgtatggatcgatcgatcgatcgaccgaattgcaatatcttcccttcagacattcatttggctcactggttatgcaatcattttgcgactaactataaatatggcgacatgttttttggggaaaaaatactagtctgttgctgataacaggtcggcaacacagcaaagagacatatttggttggcaaaacagttagattaaatttcctgcaacatataatatttagcaagaatataacctagactagatcggtggtaagaattcatatgaacaagctccaatcaaatttcaaatttttattatctatctatataaaagttacatcagagttacagtgcaattacaatgtaactttgttgtaattatatataattatggtgtcattgtgctgtaattttaaccaaacaaaaagcaagctagtgctagctgtctgttcccggtgtaaaatgttgatttagctacctgtttcacactgctacatgcagggcccttatggagtgtagaaaactagtgttgtcttctttagttggatagaagcatgaatcataacacagatcaaacggtcaaacaacttactgtgattaagcaaaaaatctgttgacacaactatagcaactccaatgatttttggcttcctttgtagaatttgttgggtcagtatattgattacgcaatgtttctttttgggcttcctttgtagaatttttgggtctgtactgattatgcactgttttcttggcttcctttgtagaatttgttggctcagtactcgcgtcaggtattccctctgctatggcctatactggagaaggatagcctcacgcgcttcaatcgactttgccaagggtggtcgcgcttgatgggccttcgtggtttcatttacccggagattctcagctccattgtcgccaacaacgctttgcgctgtgccagagtggccctgcaaggcagctctccgttgcgcggacgtcgtgccgatcccaacggcctccatccttatggctacacggctctccacctggccgctgagacgttcagcgtcgaaatggtcaagctcctcctccgccacggtgcgtcagcaaaccaccgcactgagggcgactacgtcattgagggcctcctgcctcttcacgtcgctgttgagaatgccagcatgcacaaatacctggaggacaattgggctgatggccactctcctaacaacctcatatctctcctctgtctgccagagatggttagtgtgcatctactataataatttatcgcgaacatccatcaagctaccactattttgtttcttttagtctgcttacatttacttcatatgccattactctcgccgttttgttcagttaactatgtccatgaatgcttacatgtaaggcaaaaattatttactagtggtagggtagctaccgccatgcctcatttgttaagtgaactttatctgatttcaagatttttttaaaatcttgtgcataactaagcccaatcatttctccttatttgttgcatgcatccatcgaaacttgtttacagatttttcatgttgcctcccatttgcagaagatgtatttggacacaactagattaattgcccaacatacgcataacattgtcgatgagttgtgggattacatcgataagaagaagtttgtccagttagcaattttgctgctggcttctcagaagcagctccatggccccataaataggagccgtggcaaggctaatctgaatgggtttgaatctattagacggcgcacttatgaagctatcagtggcctacatctccagatgatagctatggtgaatgaggggaaaaatggcagtgcgcttaagaagctgaaagagaagaaggaagcccttcttacagcagacgcactagttggtattatagacaaagctggtcaagatcttgaggattatattcagactaactcagaggtagttcctaaatgatacccccctttgtgatactaatgagttttcattttctatttttatgtatgcttcaaatttctgtgatgttgtgcatgcatgacttcgttctgctagggatgctccaattagtaaaatgctttcttttgtgacttgtcaacagtaggagagattcctatgcagtttaccatctagtcatcatcccataaaaaagaactaaacatatctttacataaacccaagagattgtcagtgctgctttaaaagtttatgtattcctgtttgacagtagaatatttttttttaaaaaaaatgtgttcaatttgtaacttagtaactatttttattgatataggataattctttttgtcacaatgtagttcttttgtcagtcatctaaaaattaactaatacaatttaggggtaatttcgttcatacccttgttttgatgttcaatatcgattttatcctcattttttagggttttcatttttacccctgtttttttgaaacgaagttttattttacccctactctggatggtcaagttaacaaaatgacatttataccctcagttgtggttgcacatttgccccaatatttattcattaattctgtttttaccctggtttggaacatgattttggttcggaacataatttcgaaactcaaatgattttgacaaacttttactaatacatatgaatgaatgaacaatttgtagcccaccgtatgcaccaatatgtacaggcagaaatcacaatggatcctagacagaagtgattctgttctgcaaaataggggcaagaacgaaattatccctacaatttaagatcactttcatgggctgtgtttgaaatgtgtactgcaggaaatgtaaaaaggggtaaatgcctaggaataggcctaacatttgaagatctatttggatcacatgttttattttgggcgagtgaaacacctgatagttgttcatatggccaatagctaaacaaaaagaagtttcattaaaaaaatggagaattttgggatccatttggaagggaagatacataaagagtggtagataggaatctcatactatctttcctgtaaaattcctttggaatgcaagaacaacaaagaaaaccaagatagtaagagcgccaagaacatgcgatgattctagagcttcctcacacataggatcactactgcctatcacatcatgaagtgcctgtgaccacttaatcattaatcattctatcactgtcatggttggcactgctgttgccattcatggtggtggttgtgatggaagtaatgggatgacggagagtagtagcctggttggtttaggcagccccaactttccatcaccttttttttataaaaaaatgttttctaatttattgtctctcagtctcagttgtgtacaatgtggcctttgtagtggtaactaggtatgaatatcttctttgccgtcttgttgtgtaaaatcggttgtgattcgtgttttgtgatgtttttgttttttgttttttggtgtttccaagggtcctcctgtgttttcgaaaaaaaagatatatcttctttggctatttccacgaatatttacagcaaatacagccagtaggctactagcagtggtgcagccaggaaccagtcctagaactgcccttgcctactagcgcgaagtagtagtgtataccatgttgagaaatctaaagtagtgaaaatactaaagtttttcaccaccacaaagcgccaggtcatcggatatttaggaccgtcggatgcagccacgaattcaaccgctgccatcagatctgaagtgaagaggagtgcaaaatcctggtgaatggtagaatactccagagtctggccaaccaataatagaagccacaccaccatgtatatataagaatcactgagtgctccaccaaaaaagaacgcaaaacccagtgaacaaaagaaaaaaaaacaacacatccattggagtaggtgaaaaaggtacaaaaagaaaaaaagaacgcaaaacccatctccctaaacgcatccattccaccactgcctgcccacctcctcgcctcctcctcacctcttcccccattgctgttgcctcctccgccgtgcgcactcgccctctccatatccccgtcgccgcagcaagcccaccacctcagatcctccccatcccctccggtaaagttcctcatcctcctagtgcccgtgacagcctcctagtccccagccccatgccgtcgccttctcctctctacccccggcgtcttttcccctctctgcacccggcatctcttcctcgcacagtccaccgcctcctcccccattgacgctaaagccttgagctacgcgctttctcatccccatcccaatcacagctccagaaaatatcgaggttcacaacggtagatcaaggcgggcaacgataaatcggatcgcagcttccagtcacccctcgtcaacgggatcaacacgtcaataacccttggtatttggtgagtcacaaacttagtaaatcccatcgcctcctatctttgccttcccaagctgtagccaggaaccagttggggtcaataaagaacagtgatgggatggattgatgaagagcaatgttataataatatattagaaagcacatgtccaactgtgtttcgtaaaaaaaaaaggattgttcctgtgttttgttcagcaagggaatattaatgtgataagctgatagccaactcaaatgatttttttttcatggacaatagggtctttttaattttttttgccttctgagttctgaagctgaaagccaagcgcaacagttcatggtcaccatgtgacaataggccctctggtgtgtccttgaagcctgagggcacgttaaccttaacctgtttaagtacaaaaaaatttaggttctacttgatatatctttaaagccaacatcgatagcacctgtttaattgtacaccaatcacctgaatactggagtttctgactctgcatttagcctatgtaaatgtcaatcatatattgcaaactgtttatgcacatgtcaatataggattttagcgtgaatttgagaaacaaaatgtaaatgactgcatctgtaattactacatactaggtacttctgcatttttggcttgcaatatgctgaccacaaatggttgtcaagcctgaaatttatgatgactttcttcactcattctgatagagcttctttgatagaagaagttatatcttcttactctttaagattctagatattcctaccctcaacagcatatttcttcttactctttacgattatagatatccgtaccctgtttaacctttacgatattatatacactttgcaccagcgtatacatatatcttaaatagaccatcacatactaattttacaggtcatcatggtcgtgccacgcgcgacctacgtggctagtgttatttgaagttatgaactcagtaccatggcaaacaatgttcttaaggtggcggcgcctaggcaacaatgcactcccagcgcgatgtagagctgcaggagattcagaaaggtcaatcttgtgttatcaatctatataaaactgatggtcaaatgttaaaagagttggacttaggacaaacctagatggacttatatttgtggtaagaatttagtacttagaagacgatctttgtgtttttactgtgctgtactgtttgtcttgagagatgttctgttcaagggttattatgtgccatgcagccaccaccacccttgaaatgtatctgtataattgttggaataatgtcttgaacatttttttagtgacttacaaatattttgatgaaacgtaggtaaaccatgaggaggtccttgaacacgtttcatcaattctaaacagcaagggcattgttccttctgggaaagggatagacactgcagaccttaaatggtatgtcatctattagcttcaccttcacttatattcattccgtatcttctaaagcacatccgacatatagttgatgaggcgttcttttcctaaaatattccttcttgttttgaagctaccgatatcctgggcaaacatcaattaatatgtcacattcacgaggtttgttacttcttggttgattttatttcttaatactagaaaagagaaaaatttatacttccacctgttgtttgtggtgatgcactactttccaatattgcagtataaaaaacctgatcttatccagtaaaaaaagggggtgcaacgtaatgtaaagtgaatcaaaactgactggaccaccactctgctgctgaccgacaagtatcagctgtggtgctcgtaatattgtctgcagattcttttttttattcatgtatgtattgctgctgccaagatgcaaggacaacgattttcctccatatcgctaacacccataacaatcttagccattgcctattgattagatttctggctatgattaactttctgttcctttacactgtgcctttattgaatatagttgacccctaaccaattcctttattgaatataatggacactgggggaactaatgaagctgacaagtcatatacccttaatgctgaaggttgtaaaagggtaaggtgatactttactaaattggaattgtggattatctttcttttcccatgtcaaaaatatgtttacttcaacaaacatataattgctatgccgtttttttgcaagtacttgacagcaaaagcctttcagttttgttgaaaaaaaaagttttagtctgatcactgtaacttcttgtgatcctccaaatggcaccgtcaattcttatcttagttgttcaagtacagtagtgttgtagtctactcccttcgtttcacaatgcaagtcattctagcatttcccacattcatattgatgttaatgaatttattaacatcaatatgacttgcatttgtaatctgttgagtctaatttgtacttatagatatttatagtggcattattcttctgaagtaacatatcctatcaacttggtcgattaaatatttaaggtggtatttgatataaattaaataaacataacacgtaacctctagttgccgccatgctgtttaacaagttaccatgtatactcattgcttcccaggtgtttgttgtttatacattcagatgctacgtctcatgtaaacagatcccttcaaagcgaccatctaaactactggtcctaaaagaagcgagagataagttctttccatactggaaatcggtgctgtctgcccgtttgccggtgaagatagttccaccctgtgaaccaagcagcaatgacatacaaaggactgaaccaaggaaggacatcctaagtactgaagcaagcaggaaggacttgcaacccccaaacaaatcaatcgcgaatcttgtttcgacgtcaaagccccgattggcaagcaattatgaatgcaggaggcagctttgtgctcttgctgcgatgtctcttaaggtgttgaggcgcacgtgagtgaatctatatggtaatatacctgttaaaatactccttttttaggctactgcatgatcgtttcttttgttatagaatcttttatgctcaatgttgctataatctttgtgcaggcttggtaaagacgaaagtatcggcggcatgagagtagctgtgctagaatctgtgttcgtgttcttttgaccttcgtggccgtgttatattaacatgtatgtacttgtcatgaaaataagatatatatataccagatgtaatgtatttcaggcttgatgcaacctggtaacttggtaagatttctagctgaacacattgtgctatctttgggagtgcctt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0219400, RefSeq:Os11g0219400