BGIOSGA035250

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Revision as of 09:04, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035250| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035250, complete gene.| tag = OS11G04...")
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Gene Name

BGIOSGA035250

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035250, complete gene.

LocusTag

OS11G0473200

Ensembl Transcript ID

BGIOSGA035250-TA

Ensembl Protein ID

BGIOSGA035250-PA

Length

7046

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:12788873..12795918

Sequence Coding Region

12788873..12789015,12789937..12790179,12790979..12791123,12791345..12791404,12791488..12791583
,12791763..12792179,12792936..12793076,12793155..12793325,12793506..12793763
,12793853..12794001,12794187..12794669,12795258..12795531,12795742..12795918

Genome Context

<gbrowseImage1> name=IndicaChromosome11:12788873..12795918 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:12788873..12795918 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATGGAGATGGAGATGGTGGTGGCCGTGCCGTCGCCGGAGGTGCCCGCGGAGGAGGAGAGGGCGCTGATCCGGGACATCACCCTCGCCGCCGAGGCCCACGCCAAGGAAGGGGACACCTTCTTCCTCATCACCCACAGGTGGTGGCAAAGTTGGATTGATTATGTTATTCAAGATTTGGCTAATTCAACGAATAATGGTTCTCATCATCATGAGCATGGTTCTAACGTTCTGAGAAGACCAGGAGCAATTGACAATACAGATTTGATAGATGATACTGCATCTGAAGTCTCGAATATGGAGATTGAACTACATGATACATTGGTTGAGGGTCGTGACTATATACTGCTTCCCCAACAAGTCTGGGAAAAGTTGCACGGTTGGTATGGTGGAGGACCAACATTGCCAAGAAAGGCAATCAATACTGGCTTGTCTCAAACTGATTTAGCCATAGAAGTTTATCCTTTACGTCTGCAGTTACTTCTGGCTCCAAAAGGAGAGCAAGCTGTTATAAGGATAAGCAAAAAAGATACAGTTGGCGAACTCCATAAGAAGGCTTGTGAGGTTTTTGATTTGATACCTGATGAGGTCTGCATTTGGGACTACTATGGCCGAACAAGACATTCTTTGATGGATAACTTGGAGAAAACCCTTGATGATGCCAACATTCAAATGGATCAAGATATTCTAGTGGAGGTTACTACCGATGCAAATGGTAGTTTGGATGGTGGTTGCATTGGTTCAATCCAAGAAAATGAATATTTAGAACGAGAATCAACTTCCTTGATTGCAGATGCTTCGAAATCAGGATTATCAAATGAGAATTTTGCATCAAACAATTATACTTCCAGAAGCTACAGCTCTAGTCTTACACAAAGCCAGTACCTGCGATCTTCGAATGGGGACTTAGATAACATGCATGGTACTAGTGCCATGATCACCAGAGGATCTCCTTTAGGTCTTACAGGGCTACTCAACTTGGGAAATACATGTTTCATGAATAGTGCTATACAATGCCTTGTGCACACACCAGAATTCGCTAGATATTTTCGTGAAGATTACCACCGTGAAATAAATTGGCAAAATCCCCTGGGTATGGTGGGTGAACTTGCATTAGCCTTTGGTGAGCTACTGAGAAAACTGTGGGCTCCTGGACGTACACCAGTTTCTCCTCGGCCATTCAAAACAAAGCTGTCTCGCTTTGCACCTCAGTTCAGTGGATACAACCAACATGATTCACAGGAGTTGTTGGCATTCCTCTTGGATGGACTTCATGAAGACTTGAACCGTGTGAAACATAGGCCTTACATAAAGTCCAAAGACGCTGATGGTCGATCAGATGATGAGGTCGCAGATGAATATTGGGCCAATCATATTGCCAGAAACAATTCAATCATTGTTGATGTATGCCAGGGACAGTACAAGTCAACTTTGGTATGCCCAGCCTGTGGAAAGGTTTCAGTGACTTTTGACCCATTCATGTATCTTTCCTTGCCTCTACAATTTACATCAACCCGGAGCATGACCGTTATGGTCTTTACTTTTGATGGGAGTACTCCACCAACACCATACACTGTAAATGTACCCAAGCAAGGAAGGTGCAGAGATCTTATCCAAGCCATCAGCAATGCATGCTCACTTAGAAATGGGGAGAGACTTGTAATTGCCGAGATACGTAATCATAGGATCCATCGTCTACTTGATGATCCAGTGGTTCAACTATCAACAATTAATGATGATGATCACTTGGCAGTTTATAGGCTTCCAAAAATGGAAAAAAAGCCAAATTACATTCAGTTTGTTCATCGCCGTGATGATTGGGACAACGGAAACAATATCAGTGTAACAGCTTGGAAGCCCTACGGTGTTCCTCTTCTGGCACAAGTATCTCGTAATGAAGCTGTCACGGGTATGCATATCCATGAGATGGTCCGTAAAATGCTTGCACCTATGCAGAAGAATCAGGAATCCCAACATTCGGTTCAAAGCTCTGTTTCCACAAGGACACAGACTTATCATACTGACAGCACCAAATTTCAGCTACAGTTGATTGACGATAGCAACACAACTATTGAGCAATCCAATGATACTATTAGAGTTCCACAGTCTTCTCTTGCAGCTGTAATCTTTGTCAATTGGTCTAAAGCAGATCTGAAAAAGTTAAACACTCATCATTTGGAGAACCTTCCGGAGGTGTTCAAGTATGCTCCTCCTGCCAAGAGAACCCGTGGTGAACCTCTCTCGCTTTATTCATGCTTGGATGCTTTCTTGAGAGAAGAACCTCTTGTTCCTGAAGACATGTGGTACTGTCCGAGGTGCAAGGAGCAAAGGCAAGCCAGCAAAAAGCTTGACTTATGGAGACTTCCAGAAGTGCTAGTTATACATTTGAAGAGATTCTCCTTTAGTAGGTCAACAAAGCAGAAGCTTGAAACATTTGTCAACTTCCCAATACATGATTTTGATTTGACAAACTATATTGCCAACAAGAAGAGCTCAGAACGCCAGATATATGAGTTGTATGCTGTGAGCAATCATTATGGCAGCATGGCAAGTGGACATTATACAGCATACATAAAGCTTTTGGACGAGGAAAGATGGTATAATTTTGATGATAGCCATGTTTCTGCCATCAATGAAGAAGATGTAAAATCAGGTGCAGCCTATGTGCTCTTTTACAGAAGAGTTAGAGGTGGAGCAGCAAGCAATGCAATTCATCCGCACGTTAATCAAAATCACAGATCTAGCCAAAGATGA</cdnaseq>

Protein Sequence

<aaseq>MEMEMEMVVAVPSPEVPAEEERALIRDITLAAEAHAKEGDTFFLITHRWWQSWIDYVIQDLANSTNNGSHHHEHGSNVLRRPGAIDNTDLIDDTASEVSNMEIELHDTLVEGRDYILLPQQVWEKLHGWYGGGPTLPRKAINTGLSQTDLAIEVYPLRLQLLLAPKGEQAVIRISKKDTVGELHKKACEVFDLIPDEVCIWDYYGRTRHSLMDNLEKTLDDANIQMDQDILVEVTTDANGSLDGGCIGSIQENEYLERESTSLIADASKSGLSNENFASNNYTSRSYSSSLTQSQYLRSSNGDLDNMHGTSAMITRGSPLGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHREINWQNPLGMVGELALAFGELLRKLWAPGRTPVSPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKHRPYIKSKDADGRSDDEVADEYWANHIARNNSIIVDVCQGQYKSTLVCPACGKVSVTFDPFMYLSLPLQFTSTRSMTVMVFTFDGSTPPTPYTVNVPKQGRCRDLIQAISNACSLRNGERLVIAEIRNHRIHRLLDDPVVQLSTINDDDHLAVYRLPKMEKKPNYIQFVHRRDDWDNGNNISVTAWKPYGVPLLAQVSRNEAVTGMHIHEMVRKMLAPMQKNQESQHSVQSSVSTRTQTYHTDSTKFQLQLIDDSNTTIEQSNDTIRVPQSSLAAVIFVNWSKADLKKLNTHHLENLPEVFKYAPPAKRTRGEPLSLYSCLDAFLREEPLVPEDMWYCPRCKEQRQASKKLDLWRLPEVLVIHLKRFSFSRSTKQKLETFVNFPIHDFDLTNYIANKKSSERQIYELYAVSNHYGSMASGHYTAYIKLLDEERWYNFDDSHVSAINEEDVKSGAAYVLFYRRVRGGAASNAIHPHVNQNHRSSQR</aaseq>

Gene Sequence

<dnaseqindica>1..143#1065..1307#2107..2251#2473..2532#2616..2711#2891..3307#4064..4204#4283..4453#4634..4891#4981..5129#5315..5797#6386..6659#6870..7046#ATGGAGATGGAGATGGAGATGGTGGTGGCCGTGCCGTCGCCGGAGGTGCCCGCGGAGGAGGAGAGGGCGCTGATCCGGGACATCACCCTCGCCGCCGAGGCCCACGCCAAGGAAGGGGACACCTTCTTCCTCATCACCCACAGGTCTCGCTCCCCTTCCCTTGTTCTTCCCCTCTCCATGTTGCGCCCGGATTTGGTCGTTTGGGGGCCAAAGATTGTTTTTTTTTTTAAAGTTCCTTTATTGCGCTCCGGCGACCGTCGCCGGCGGGAGGTATGCTTATGTGAGTTAATGGAGTGGCCTGGAGGCATCTGGGCTCGGTATAGGGGAGCTTGATTCTTCCTGTGCAACATGGGCTCGGTCCAGACCGTGATTTGGCTGCGCAAAATGCTGCTTGTATGATAGTAGTACAGAATTTCTTTCAGATGATCTTGGTGGAGTTTGCAGGATATTCAGCCTGTTTGTAGGCGCATCTGGTCCCAGTAGTGGCTGCAGTGTTGGAAGCTTGGAATTTTGACCTTTCAGGTTTTATCACACCCTGTTAAAGTGGAGCTCTAGCCATGTTATCTGCTAGGGTGATGCATTCTTTGACCGTGTTTGTGCAATAGGCATTCTATGAATTCGTTCTGTAAACTCGCAAGCTTCAGCTGCCAATTGGCAACTGCCCGTTCTCTCCATGTAGGAATTGCATTGTCTATCATGCTGACTTCTGATCTCTCATGTTCATGTTTTAGAATACTTCAGCCAAGGTCTGGATGCTTGTAGGATAGCTAGATAGCACAGAAACTGCACCCATGGAAAGATAGCTTCGGCCTTCTTACATTTGGACATGGACATGGAATGCTTTCATTACCTCCTTGTGTTTTATAGATATTGTTTGGCTATTTGATGGAGATAGAAGTCAGTGAAGTATCTGTTTCAGAAGTATTTTCTGAAATATAGTTAATATACAAATCTATGCATTTTCATTTTTCTTTATCTCGTTTTTACTATTCATTAAGCTGCTAATTGCTTGTTTAATATTTATTTGATTTTTATACTTGGTGGCTCTTGGTTGACTCAAATAGGTGGTGGCAAAGTTGGATTGATTATGTTATTCAAGATTTGGCTAATTCAACGAATAATGGTTCTCATCATCATGAGCATGGTTCTAACGTTCTGAGAAGACCAGGAGCAATTGACAATACAGATTTGATAGATGATACTGCATCTGAAGTCTCGAATATGGAGATTGAACTACATGATACATTGGTTGAGGGTCGTGACTATATACTGCTTCCCCAACAAGTCTGGGAAAAGTTGCACGGTTGGTATGTCATATTTTAATACGAACCATTAAAATATATAGATCTTCAGCTCATGCTCATTATTACCTTTTTTTTTGTGATTCCTTTACTATACCTCTAATATGTCTACTCTAGGAACATGGGATCATCTTGTTTTTTTGTATGTGTAACAGATAAAATGTCCGTAAAGGTGATTAAAACTTATGTACCTGTTTCTGTTTGATTGTGTACACATACCAGATATCACTCACTATCCAGGGTCTGCTTAATTGATTGATTATCAACAGAGTGCTTTGTAAACTACTACTAGTCTGGAAAAGAAAGTGAATAAAATGAAGAAAGCAGCAGAAAATGGTTGTTTCTTGGTCAATTTGTTATATATCGTACAGATCTTGCAACCTGAGAATTCTTCTCTTATCTGCACAACTATTGTCTTGTCAGTAACATATTCCATAGCATACAGGTTATGCAGATATTTCTCATTTAGTGCTGTATAGAATTTATTAACTTAGTTTTTGCAAAGAAGGTTGATGTTTGTAACATTACTAACATACTGGAGTAATTTTTAGGTTAATAAAAATGACATTGTCTAATAATCTGAGCTCTATGTGGGTTCACTTTGCACTCTTGATGTGATTGCCATCATAAACTATGATACCCTGCTCTAGTGTTTGCACATGCACATGCACACTGTACATGCACTTCTGGATTTAAGTGCTGAAACTCCTATGGGAATGTTAAATTGCACATTTGACGTGCTAATCTTCAATTTTATTTCTTTCTTGTGTATTTATTTCTTATTATTCTGAAAATGCATTTACAGGTATGGTGGAGGACCAACATTGCCAAGAAAGGCAATCAATACTGGCTTGTCTCAAACTGATTTAGCCATAGAAGTTTATCCTTTACGTCTGCAGTTACTTCTGGCTCCAAAAGGAGAGCAAGCTGTTATAAGGATAAGCAAAAAAGTATGTATCTATTTCCCTGGCTAGGGTTGAACATGTGACAGTCATTTGTTTTGTCATTCCATCAATTGATTTAAATTGAATAATAATGTAATGTATGAAAGTACAGATCCTCTGGAGGAAAAAATGATGTAGAACTCTTTTAATGGCAAAAAGTAATAACTGTGTAAAATTTCACTACATTTTTTAGCAGACAAGAACCAACAATTTATTGATTCGTGCAGGATACAGTTGGCGAACTCCATAAGAAGGCTTGTGAGGTTTTTGATTTGATACCTGATGAGGTAGATATTTTATTAGGGTGTTTACAGTATTATGTTTCCCCCCTCTAAATTTGAAGTTTTCATGGTCATGTTATTATTGGCAGGTCTGCATTTGGGACTACTATGGCCGAACAAGACATTCTTTGATGGATAACTTGGAGAAAACCCTTGATGATGCCAACATTCAAATGGATCAAGATGTGAGTACTGGAATTTACGTAATAATTTCCATTGACAAGTTATGTTTTCTGTTCCTTGACTGGTGTTTTCCCTCTTGGCCATAATACACTATGTTTTTTAGTTTAGTTTCTCCAAATATTCTCCAGAATGTTTCCATATTAAATGATTTAACTCGAACTATTTGTTTTGTTATTGACAGATTCTAGTGGAGGTTACTACCGATGCAAATGGTAGTTTGGATGGTGGTTGCATTGGTTCAATCCAAGAAAATGAATATTTAGAACGAGAATCAACTTCCTTGATTGCAGATGCTTCGAAATCAGGATTATCAAATGAGAATTTTGCATCAAACAATTATACTTCCAGAAGCTACAGCTCTAGTCTTACACAAAGCCAGTACCTGCGATCTTCGAATGGGGACTTAGATAACATGCATGGTACTAGTGCCATGATCACCAGAGGATCTCCTTTAGGTCTTACAGGGCTACTCAACTTGGGAAATACATGTTTCATGAATAGTGCTATACAATGCCTTGTGCACACACCAGAATTCGCTAGATATTTTCGTGAAGATTACCACCGTGAAATAAATTGGCAAAATCCCCTGGGTATGGTGGTAAGTACTCTTTCTACTAGCATGGCGTTGAAGCCTTACGTTTGAACTTAAAGTGTTACAGAGATAGTGATATTATTTTGTAGCATGGCGTTGAAGCCTTACGTTTGAACTTAAAGTGTTACAGAGATAGTGATATTATTTTGTTACATGCATTTGGTTTGATGCCAGTCGAATTTGCTGATTTTAGATTTCTACATAGTATGCAACAACCGAGAGATTTTTGATACTTGGTGAAATTAGTGAAATTGACAATTTTGTTTGTTTTGATTCAGTAACAATTCCCTTTTTTTTGACGGGAAAGTAACAATTCCCTTGGATATATACTTTTTTTGGGTTGTGCATTCTGTTATGCTACCTGCGTTCAAATTTCTACTTTTTTTCGTTGTATAAGTGACTTATCAAGTTTATTTGATGCTTCTGTTCTTTTTTATGTCAGCCTTTGTCAGTTCATATGGTTGTGCTTGAAATCAATTTTCTGATTTCTTCTTTTGACCAAAAAATTTCTAATTTCTTACAGCAAAGATAATCTCAGATGCGTGATTCCCTTGTCATATTAAGATAACGGATACAAGCTACAGTTATTAGAAATAATTATTTTTTGGAACATTTTTTGTGCACTGATTTGGTGCGTGTGTATCATGAAAGCAAAAAAAAAAAAAAGAAAAAGAAAACATGGCTACTGCATGGTTAGGTTTCATGTTCATTTGCATGCGTACCTCATGTTAATTGTACTGAGTTCTGATGGTAGTCTTGTAGGGTGAACTTGCATTAGCCTTTGGTGAGCTACTGAGAAAACTGTGGGCTCCTGGACGTACACCAGTTTCTCCTCGGCCATTCAAAACAAAGCTGTCTCGCTTTGCACCTCAGTTCAGTGGATACAACCAACATGATTCACAGGTTCGATCCTCTCCATGAACAACTATTCTATTTTGTCTTCAGATATTCTTTTATATTTATCTTGGCAAAATCTTGCAGGAGTTGTTGGCATTCCTCTTGGATGGACTTCATGAAGACTTGAACCGTGTGAAACATAGGCCTTACATAAAGTCCAAAGACGCTGATGGTCGATCAGATGATGAGGTCGCAGATGAATATTGGGCCAATCATATTGCCAGAAACAATTCAATCATTGTTGATGTATGCCAGGTTAGATTTTGTGCTCTCAAGCAGACATCATTTTGAAATTCTAGCAATAGCAGTGATGACAGTATGCAAGATAAAATGGGTCCAGTGTCTGGCTCTCTGTTACCAATTGTGGCGTAATTTTTTCTCCCTTGTTGCTTGCGAAAGTTGTTTTGTAACCTACCTTGTATTGTGATTTTCCAGGGACAGTACAAGTCAACTTTGGTATGCCCAGCCTGTGGAAAGGTTTCAGTGACTTTTGACCCATTCATGTATCTTTCCTTGCCTCTACAATTTACATCAACCCGGAGCATGACCGTTATGGTCTTTACTTTTGATGGGAGTACTCCACCAACACCATACACTGTAAATGTACCCAAGCAAGGAAGGTGCAGAGATCTTATCCAAGCCATCAGCAATGCATGCTCACTTAGAAATGGGGAGAGACTTGTAATTGCCGAGGTTTGTCATAAAAGGCCAACTGAATTAAGTGCTATATGCTTGTGGGTTTTATGAAACAATTGAGTTATTATTTTCCTTTTTTCCTACAGATACGTAATCATAGGATCCATCGTCTACTTGATGATCCAGTGGTTCAACTATCAACAATTAATGATGATGATCACTTGGCAGTTTATAGGCTTCCAAAAATGGAAAAAAAGCCAAATTACATTCAGTTTGTTCATCGCCGTGATGATTGGTAAGCAAATAATAAAACTCTAGTTACAATTATGTTCATGCTAGTATGATAGATGTAGCTTACTTGCATGTTTTTTATATATAAACAAGCCTAGCATATGTGATCCCTTATACTTTACATGGAATAGTTGGAAAATAATACTTGTGATCGAATTTTTCTTATGATGTTAGCTTCACTACTTACAGGGACAACGGAAACAATATCAGTGTAACAGCTTGGAAGCCCTACGGTGTTCCTCTTCTGGCACAAGTATCTCGTAATGAAGCTGTCACGGGTATGCATATCCATGAGATGGTCCGTAAAATGCTTGCACCTATGCAGAAGAATCAGGAATCCCAACATTCGGTTCAAAGCTCTGTTTCCACAAGGACACAGACTTATCATACTGACAGCACCAAATTTCAGCTACAGTTGATTGACGATAGCAACACAACTATTGAGCAATCCAATGATACTATTAGAGTTCCACAGTCTTCTCTTGCAGCTGTAATCTTTGTCAATTGGTCTAAAGCAGATCTGAAAAAGTTAAACACTCATCATTTGGAGAACCTTCCGGAGGTGTTCAAGTATGCTCCTCCTGCCAAGAGAACCCGTGGTGAACCTCTCTCGCTTTATTCATGCTTGGATGCTTTCTTGAGAGAAGAACCTCTTGTTCCTGAAGACATGTGGTTAGTTTCCTTTCTAATTTTTCGAAAGAGTGATGTGGTCAATTTTCAATTACTTGTTCCAAGACACATTAGAAATACCATTTACTTCAGTTATACTTGGTACTAGCTGATATTCAAGGCCTGTTTGGCACAGCTCCAGCATCAGCTCCACCTCTCCTAGAGCTGGAGCTCAGCCAAACAGTTTCAGCTCCACCTAAAAGCTCCACAACTCCACTCCAGATCCAACTCCTGGAGCTAATTTAGGAGTTGGAGCTCTACCAAACTGGCCCTCAGTGACATCCAGCATTTGGGTTTTGTTAGTATGATAGTCACATTGCCAAAATTTGCATTTCAGCTGTTTGTATATACACTCGTTTACTGTAGTATATGGTATTGGCACATATACCTTATTAATTGCCCAGGGGTGTTTAAGTCTAATTTCTACCCAGTTGAAAGTGTAGGACGTTTTTTTTTTGTTTTTGTTTTTTTTTTTGCGTCTATTGTTCCATGTCTTGTGCTCTTGTAAAAGTTAAGATGATAAGTTTTCCTGCCTGATGTCTCTTGTTTTCACTTCAAACAGTGTGAGTAACAATCCTATTATTGAATTAGGTACTGTCCGAGGTGCAAGGAGCAAAGGCAAGCCAGCAAAAAGCTTGACTTATGGAGACTTCCAGAAGTGCTAGTTATACATTTGAAGAGATTCTCCTTTAGTAGGTCAACAAAGCAGAAGCTTGAAACATTTGTCAACTTCCCAATACATGATTTTGATTTGACAAACTATATTGCCAACAAGAAGAGCTCAGAACGCCAGATATATGAGTTGTATGCTGTGAGCAATCATTATGGCAGCATGGCAAGTGGACATTATACAGCATACATAAAGGTTCATCCTATAATCTGAATCTGCGTGCAATTTTATTTTACCGTAAAAAAATGTTGTTTGTTAGAGATTCCAAAGGGTTATTTGTGTTTATAGCTAGTGTATCTGAATTTTATTTTGCTGTCTGTACATGTGCAAAGAACTTAATTTGTGCCATAAAAATCCTGCTTGCTGTGCTCTCCTAGAATTCTAACTTGAAATTTCTTTATGTAGCTTTTGGACGAGGAAAGATGGTATAATTTTGATGATAGCCATGTTTCTGCCATCAATGAAGAAGATGTAAAATCAGGTGCAGCCTATGTGCTCTTTTACAGAAGAGTTAGAGGTGGAGCAGCAAGCAATGCAATTCATCCGCACGTTAATCAAAATCACAGATCTAGCCAAAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035250