Os11g0222900

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Revision as of 09:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0222900| Description = Disease resistance protein family protein| Version = NM_001074061.1 GI:115484770 GeneID:4350103| Length = 4490 bp| ...")
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Gene Name

Os11g0222900

Description

Disease resistance protein family protein

Version

NM_001074061.1 GI:115484770 GeneID:4350103

Length

4490 bp

Definition

Oryza sativa Japonica Group Os11g0222900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:6402788..6407277

Sequence Coding Region

6403830..6405918,6406272..6407113

Expression

GEO Profiles:Os11g0222900

Genome Context

<gbrowseImage1> name=NC_008404:6402788..6407277 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:6402788..6407277 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaccctgagctctgtcactaatatcgtcgtggggaagctcttcgcgctactggagaagaagtacgagcagtggaggggcctggaggacagcatcggtttcatcaagcgggagctccgcgtgatccatggcttcctgcacgaccagctcccgcgggatcggaatggggaggatccgccgatcagcgccgtgcaggccacatgcatcgacgagctccgggatctggcgcacgacatcgaggactgcctcgaccgcttcctgccctgcgccgcgtgcgagcgcgattcgtcgttcctccgccgcctcgcggcggactctcggttcgccggcgaggtcgagaggctcaagtcgcggctggaggaggcgcacgagcggagggctaactacggcgtcaacggcgtcgccggctccgccgccgcagctggcggatcaagctcaggctcagcaaatacgacggattacatggcccagagctgtggccttgtgggcatcaacgtgcccaggcaagagcttcttgacctgctcctgctcgaggacgtggagggccggccggagcggatgcgcgtgatctccatcgtgggattcggaggctcggggaagacgacgctcgcgagggcagtgtacgactgccccgacatcgccggccagttcgacggccgcgcctgggtcgtggcgtccaagcacagagatgataccatggggctcctgtcggcgttactcggccaaattcgtcaggaagatgaccaaagattcaatcaaattcctcaggatgatgagcaaagattccagctacagtcccaagtccaagctgatatcaggcaacacctgaatgctaagaggtaccttctcgtgtttgatgatattgaggagaagcagtggaactgtataaaatcaaccttccctacagaaacaagaagcagagtactagtgacaacgactattaaaccagttgcaaatgcctgcagccatggtaccggttctgtgtacaatatgagaactctgaatgtgaaccattccaaggatttgctgcaatctgtcctaaaggaatactctcctgagttggagttggacttgccatcgattctggagaaatgcgacggcctcccgcttgctctggttagtgtgggaaactttctatggcgagaaaggatcactgaatgttaccgaaatcaagtctgctgcaacctaggtcatcacattgagaaggagcacgcctttgcagaactgcgacaagttcttgcgaacaactacaacactctgcctggccatcccctcaagacctgcttactgtacacgactgtgttccccaatggctgttccatcagaaggagcagtctgatcaggcgatggttagctgaaggctatgtacaatgccaatatcctcgcagttcactggaggttgcagatgcaaacttggaggagctaatggaccgaaatatcatcaggtcgatggatgttaccaacaatggaagggcgaagaactgcagggctcacggtatcatgcacgaattcatgctgcacaagtccaggtgtgataatttcattgcatccctccatgacccagatcgaagcaaatgccgccacctcttcttaacccagagccttacaagtggaaatcaatcatacatggattgtggaactaatccaaagggtaagcaacctcgtgccaggtctctgacgatctttggaaatgcaggggaatttgctttagattatgccaagtgtgagctgttgagggtcttggatctagaagaatgtgatgatctcaaggacgatcatgtcaagtacatatacaagctgttgcatctaaaataccttggccttgggagcaccattacatatattccgagaaaaatcaataaagggctgcattgcttacagacactcgacctgaggaagacaaggataaacacattgcctgtggaaatcattataatgccacatctagctcacctgtttggaaagattaagattagggaagcaaggggcctttgggtccttgaaacgaataaaatagagaagatattatcagataaaagtaaattgcaaactctagcaggttttgttgtagacaagaactctttgtttcctcgcctgatggttcatatgaataaactaagaaaggtcaagatatggtgcgagcccgcagctgaacgtaatagcagtatcagcttaatttcagcggctattcagaagtttactcaggctggcatggacactactggtgctcattctctgtcacttcgatccagaaaatttcctaaccgtctactgtgttgtctggagaagtcgtatggttatctcagctccttgaaactgcagggcgagttgagccggtttccacagttcatcacatcactgtgtggtctcacagagctgtgcctttcatcaacaaatctgaataaggaggatctatcaaacgtttgcacattgcaccacttgctttatctgaaactggttgaatctgaccttcagggctttatcataaaaaatggtgacttcccacgtatgcgacacttatgccttgtggtgcaaaatcccaatctccctacagttgaaaaaggagctttgccacatctcctgtcactccaattgctctgcaaggatctagttggtctttctgaaatcaagattgagtaccatgattaccttgaggaagttgctcttgattctatggtcaatatagaaacaatagaaatttgggaaaatgaagctaagaagcacccaaatagacccaaggttctgttccgcaagagggttgatccaaccgatgctcagtccacagcgaagtatgctgcaacagaaagaccagtacctgagacaggatgccctgcggtgataaaaaaacggaaattccatgctatccaatcatattataacgagtctgttgaaacaaaaaagagtttaagatgctgctctggcgtttaa</cdnaseq>

Protein Sequence

<aaseq>METLSSVTNIVVGKLFALLEKKYEQWRGLEDSIGFIKRELRVIH GFLHDQLPRDRNGEDPPISAVQATCIDELRDLAHDIEDCLDRFLPCAACERDSSFLRR LAADSRFAGEVERLKSRLEEAHERRANYGVNGVAGSAAAAGGSSSGSANTTDYMAQSC GLVGINVPRQELLDLLLLEDVEGRPERMRVISIVGFGGSGKTTLARAVYDCPDIAGQF DGRAWVVASKHRDDTMGLLSALLGQIRQEDDQRFNQIPQDDEQRFQLQSQVQADIRQH LNAKRYLLVFDDIEEKQWNCIKSTFPTETRSRVLVTTTIKPVANACSHGTGSVYNMRT LNVNHSKDLLQSVLKEYSPELELDLPSILEKCDGLPLALVSVGNFLWRERITECYRNQ VCCNLGHHIEKEHAFAELRQVLANNYNTLPGHPLKTCLLYTTVFPNGCSIRRSSLIRR WLAEGYVQCQYPRSSLEVADANLEELMDRNIIRSMDVTNNGRAKNCRAHGIMHEFMLH KSRCDNFIASLHDPDRSKCRHLFLTQSLTSGNQSYMDCGTNPKGKQPRARSLTIFGNA GEFALDYAKCELLRVLDLEECDDLKDDHVKYIYKLLHLKYLGLGSTITYIPRKINKGL HCLQTLDLRKTRINTLPVEIIIMPHLAHLFGKIKIREARGLWVLETNKIEKILSDKSK LQTLAGFVVDKNSLFPRLMVHMNKLRKVKIWCEPAAERNSSISLISAAIQKFTQAGMD TTGAHSLSLRSRKFPNRLLCCLEKSYGYLSSLKLQGELSRFPQFITSLCGLTELCLSS TNLNKEDLSNVCTLHHLLYLKLVESDLQGFIIKNGDFPRMRHLCLVVQNPNLPTVEKG ALPHLLSLQLLCKDLVGLSEIKIEYHDYLEEVALDSMVNIETIEIWENEAKKHPNRPK VLFRKRVDPTDAQSTAKYAATERPVPETGCPAVIKKRKFHAIQSYYNESVETKKSLRC CSGV</aaseq>

Gene Sequence

<dnaseqindica>1360..3448#165..1006#aggatgatattactattctatagcgtagaattgattgaggttgaaggcttcaagcgatatacgtactatcaatctttgaaatgcgcgtgacttgctattaatctttgaaagataaaggtgcgactcgatcggcgatgatgcgagtgcagctctgagaggcagacatggagaccctgagctctgtcactaatatcgtcgtggggaagctcttcgcgctactggagaagaagtacgagcagtggaggggcctggaggacagcatcggtttcatcaagcgggagctccgcgtgatccatggcttcctgcacgaccagctcccgcgggatcggaatggggaggatccgccgatcagcgccgtgcaggccacatgcatcgacgagctccgggatctggcgcacgacatcgaggactgcctcgaccgcttcctgccctgcgccgcgtgcgagcgcgattcgtcgttcctccgccgcctcgcggcggactctcggttcgccggcgaggtcgagaggctcaagtcgcggctggaggaggcgcacgagcggagggctaactacggcgtcaacggcgtcgccggctccgccgccgcagctggcggatcaagctcaggctcagcaaatacgacggattacatggcccagagctgtggccttgtgggcatcaacgtgcccaggcaagagcttcttgacctgctcctgctcgaggacgtggagggccggccggagcggatgcgcgtgatctccatcgtgggattcggaggctcggggaagacgacgctcgcgagggcagtgtacgactgccccgacatcgccggccagttcgacggccgcgcctgggtcgtggcgtccaagcacagagatgataccatggggctcctgtcggcgttactcggccaaattcgtcaggaagatgaccaaagattcaatcaaattcctcaggatgatgagcaaagattccagctacagtcccaagtccaagctgatatcaggcaacacctgaatgctaagaggtgagaaattctctgcttcagctcatttcccagcaatttaatttccttcagatgaaatcagttctatcttacaatttcgtagcatgtgttcgcatttacagttacacttttttcttcttctttgaaattggattcaccgtatatagcgaactatctgaactgcatgtacaagtacaacttacctgttaaaacttaagttattgactgcttcacactttgtccgacacaaaaaaggcttattttggatcattaacaacaattagctagtttgcttgtcctgaaaaatgctcttgacaaccgttatttctcccaatgaattaaattcacttctgtatttccattatacctgctaggtaccttctcgtgtttgatgatattgaggagaagcagtggaactgtataaaatcaaccttccctacagaaacaagaagcagagtactagtgacaacgactattaaaccagttgcaaatgcctgcagccatggtaccggttctgtgtacaatatgagaactctgaatgtgaaccattccaaggatttgctgcaatctgtcctaaaggaatactctcctgagttggagttggacttgccatcgattctggagaaatgcgacggcctcccgcttgctctggttagtgtgggaaactttctatggcgagaaaggatcactgaatgttaccgaaatcaagtctgctgcaacctaggtcatcacattgagaaggagcacgcctttgcagaactgcgacaagttcttgcgaacaactacaacactctgcctggccatcccctcaagacctgcttactgtacacgactgtgttccccaatggctgttccatcagaaggagcagtctgatcaggcgatggttagctgaaggctatgtacaatgccaatatcctcgcagttcactggaggttgcagatgcaaacttggaggagctaatggaccgaaatatcatcaggtcgatggatgttaccaacaatggaagggcgaagaactgcagggctcacggtatcatgcacgaattcatgctgcacaagtccaggtgtgataatttcattgcatccctccatgacccagatcgaagcaaatgccgccacctcttcttaacccagagccttacaagtggaaatcaatcatacatggattgtggaactaatccaaagggtaagcaacctcgtgccaggtctctgacgatctttggaaatgcaggggaatttgctttagattatgccaagtgtgagctgttgagggtcttggatctagaagaatgtgatgatctcaaggacgatcatgtcaagtacatatacaagctgttgcatctaaaataccttggccttgggagcaccattacatatattccgagaaaaatcaataaagggctgcattgcttacagacactcgacctgaggaagacaaggataaacacattgcctgtggaaatcattataatgccacatctagctcacctgtttggaaagattaagattagggaagcaaggggcctttgggtccttgaaacgaataaaatagagaagatattatcagataaaagtaaattgcaaactctagcaggttttgttgtagacaagaactctttgtttcctcgcctgatggttcatatgaataaactaagaaaggtcaagatatggtgcgagcccgcagctgaacgtaatagcagtatcagcttaatttcagcggctattcagaagtttactcaggctggcatggacactactggtgctcattctctgtcacttcgatccagaaaatttcctaaccgtctactgtgttgtctggagaagtcgtatggttatctcagctccttgaaactgcagggcgagttgagccggtttccacagttcatcacatcactgtgtggtctcacagagctgtgcctttcatcaacaaatctgaataaggaggatctatcaaacgtttgcacattgcaccacttgctttatctgaaactggttgaatctgaccttcagggctttatcataaaaaatggtgacttcccacgtatgcgacacttatgccttgtggtgcaaaatcccaatctccctacagttgaaaaaggagctttgccacatctcctgtcactccaattgctctgcaaggatctagttggtctttctgaaatcaagattgagtaccatgattaccttgaggaagttgctcttgattctatggtcaatatagaaacaatagaaatttgggaaaatgaagctaagaagcacccaaatagacccaaggttctgttccgcaagagggttgatccaaccgatgctcagtccacagcgaagtatgctgcaacagaaagaccagtacctgagacaggatgccctgcggtgataaaaaaacggaaattccatgctatccaatcatattataacgagtctgttgaaacaaaaaagagtttaagatgctgctctggcgtttaactgaggtgccaaatgctggcaatggtttgtagattcttctttaggtaagaatctaaatccttgaggcagaaactggttggttgatgttgtggagtgagacccatgtagcaaaatgttaaaatgaaaggtcatggaaacttatgatatatagttcctattacatatcaatatcatgtttctttcttattctaggacttttgcatatttgtttgcttgttttattcaggtcatttttccatcttcacaaatatccagatgctgcttatgttcgcattttccatgtgaatctagaggggattactatgatgctaacaataaattaatgctactcattttgctggttgaaaatataggttcaagttactttccctttttttcctttcaagaaatagatccaatttggcaattttctagtttacctatacccagttattgttttggtgttcctattacctttgttcaatttagcaattgttcctataagcatgctgggaaacagattaacatagggactatacgctaccggcaaatcatcaataaaaaaaaaacgaaccttcggtgaattgattttgacaacatccactaaaccgctcgcaggtggaaggtggcagatcagatccagtggcggtggagcctcaccctcatctcctcagggcccaggctacggtcgccgctcgccgctcgccggtgcaggcggggacggcgccgttggccgatcgcaggtgaagagaaggttaccgcgacgacgtggggggatgccacacccgatctggggcttgccttgcggctgtggcctgcgactgggagagggcctgccgttgcgcatcgtggcggcgcacgggaatatcagcgtggtgtgcggccggcgggcggcggcgatgggagaggcgcaggccttggtctggtgcagccagcctagatattttcccaaatttctgaactaaaacaaattgactgaaatactcccaatgttttgctattactcctagaatattggactgtctatacatacgttgacagaaaatcccacattctatctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0222900, RefSeq:Os11g0222900