BGIOSGA035339

From RiceWiki
Revision as of 09:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035339| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035339, complete gene.| tag = OsI_362...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035339

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035339, complete gene.

LocusTag

OsI_36250

Ensembl Transcript ID

BGIOSGA035339-TA

Ensembl Protein ID

BGIOSGA035339-PA

Length

4399

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:15102905..15107303

Sequence Coding Region

15102905..15103147,15103379..15103486,15103758..15103843,15104429..15104510,15104924..15104992
,15105111..15105197,15105491..15105592,15105687..15105776,15106530..15106610
,15106718..15106813,15106894..15106950,15107050..15107094,15107175..15107303

Genome Context

<gbrowseImage1> name=IndicaChromosome11:15102905..15107303 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:15102905..15107303 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTCGCAAGAAGCCAACTTCGCTTTCGCCGGGAACATCCCGGTTTCCTCCAAGCCCTGGAATCTACAAGTTTCGACCGGCTATCCTTTGGGACTCCGCGAGGCACAACAGATTCAGCGCACGCAACAGATTCAGCGTACTAGAAGCCATCAGCGACGAGGACGACGATTCGTTGACGGAGCGAGACTCCACCACTTCAGACAGCTGTGGCGAGGACAATTCGCGGAAAGACCCACCGCTGATGGAGGATGGAGAGATTGTGAATCCCTTGGTGAGGACATTGCTCGAGCTGTTCAGCGAGGAACAAATTTCTGAAATCCCACTCATGGAAACATATATTCGCAGATGTGGTATCAGTGAAGGAATGGGATCTCATCTTATTGAAGAGAATAACTTTCTCTTTGGAGCTTTCACTTCTATAGTGGCTTGTCCATGGTGTCCTATCCCATTTGTGTCCAAGCATGATACTGATTGTTGTGCAATTTCTCATGCATGGGCCATGTCAACTATGCTGTCAGATGACAAGGAAATGCTACGTGAAATAGCTTACCTATTAACTTCCCGGGAAGATATTCATTGTGTGCAGTCCTTCCAGCCTGTCTCCAGCGACTTTTGGCTGCATTTACAACCTTATGCCCAGAATTATATTGAGGTCAAGAACGCAAGTTCTGGGTATGACAGGGTAAAAGAACAAATAAGGTTGCATGAAGCATTTGATACACATTTGGCCTCTGGTGCATTGGATGATCATGTTCGTCAGATTAGTTCTTCAAAGGATAATTTCGTGAAGATTATGCTTGATGATGATACTTTGCATAGTCAGTTTATAGATCTGGATTATGATCTCCTGAAATTGTCACATGAGCATAGAGATAGACTTGAAAGTTTGATATGTGAGCTCGAGTCAGAAGGTTTCTTCCGTGTGGATGATGATTCTATTGAATGGGAAAAGGAACACTTTTCAGAACTTGTGGACGAATTCAATGAGCATATTTTTGCTGGGATTCACCTTCCAAAATATTATGTTATTCGTGGAGTTATGGATTATCGGGAAATGTTACATATGAAGGATAGCACTTGGGATGATGCTTTCACAGTGGTTGTTGGTGGAGCATTCTGTAGATGGATGGAAGATCGTGATCTGTTTTGGATGGAGACAAGATACTATAGGCATCGTTACTATGACATCATTCAAGAGCCAGTAAAAATGGTATTGACCCATATTACCTCCATCTTCTTTCTTGCTCCAGAGAACCTGGAGACACCATTCTAA</cdnaseq>

Protein Sequence

<aaseq>MPRKKPTSLSPGTSRFPPSPGIYKFRPAILWDSARHNRFSARNRFSVLEAISDEDDDSLTERDSTTSDSCGEDNSRKDPPLMEDGEIVNPLVRTLLELFSEEQISEIPLMETYIRRCGISEGMGSHLIEENNFLFGAFTSIVACPWCPIPFVSKHDTDCCAISHAWAMSTMLSDDKEMLREIAYLLTSREDIHCVQSFQPVSSDFWLHLQPYAQNYIEVKNASSGYDRVKEQIRLHEAFDTHLASGALDDHVRQISSSKDNFVKIMLDDDTLHSQFIDLDYDLLKLSHEHRDRLESLICELESEGFFRVDDDSIEWEKEHFSELVDEFNEHIFAGIHLPKYYVIRGVMDYREMLHMKDSTWDDAFTVVVGGAFCRWMEDRDLFWMETRYYRHRYYDIIQEPVKMVLTHITSIFFLAPENLETPF</aaseq>

Gene Sequence

<dnaseqindica>1..243#475..582#854..939#1525..1606#2020..2088#2207..2293#2587..2688#2783..2872#3626..3706#3814..3909#3990..4046#4146..4190#4271..4399#ATGCCTCGCAAGAAGCCAACTTCGCTTTCGCCGGGAACATCCCGGTTTCCTCCAAGCCCTGGAATCTACAAGTTTCGACCGGCTATCCTTTGGGACTCCGCGAGGCACAACAGATTCAGCGCACGCAACAGATTCAGCGTACTAGAAGCCATCAGCGACGAGGACGACGATTCGTTGACGGAGCGAGACTCCACCACTTCAGACAGCTGTGGCGAGGACAATTCGCGGAAAGACCCACCGCTGGTTTGCCATTACTTCTTCTCTGCATCAACTTATTTATCTAGGATTTACAAATTGTTTGTGGATGTGGCCTTATTGTGTGATTTTAGTGAATGAATTGCTAGCTTGTGATAATAGTAATGTTCTTTTTTTTTTCCTTTTCCTTATGCCAGAATTCTCTACTTCTTTTGGTGGCATATTATCAATTTTAATATAATGAATAATAAATAATATGGATGTTTTCAATTGTCACAGATGGAGGATGGAGAGATTGTGAATCCCTTGGTGAGGACATTGCTCGAGCTGTTCAGCGAGGAACAAATTTCTGAAATCCCACTCATGGAAACATATATTCGCAGATGTGTAAGTAACAAGTTTTATGCTAGATTGTGATGGGTAATGGAATCTTCTAAATCTTGTTCCACAACCGTGATGGAAACATATATTCAATCTTCAAAACCTGTGATGTTGTTTAATTATTTTTTTAGTTTTTAAGCTGGTAGATATATTTAAACTTGCACATTGACATGTTATATCCATGTATGGATTTCATCTTTAATGTATTATGTTTGTTATGTTATCCATGTATGACTTTCATCTCTAATGTATGTAATGTATTATGTTTGTTCTCCAGGGTATCAGTGAAGGAATGGGATCTCATCTTATTGAAGAGAATAACTTTCTCTTTGGAGCTTTCACTTCTATAGTGGCTTGTCCATGGTACTTGACAATGACATCATTTTTTTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTAATTTTGTATGAGATGTTTTCCTTACTTGAACAATATTTTTCCCCCTCAAATCAGATTGAAGAAGAATTTACTGCTTATCTTCACACCTATACTGAAATGTTGCATAAAGTGGATGGAATCGGTGATACAATAGAGGTAAATTATTTATTTATCCACTCCCCCATAAAAAAAAATTCTTTCAAGTGAAGAAATGAAAAAGTGAGTTGCATTTATAATGTTGGTGCAGTGGCAGATGTGGAATTTCAGTTGGGAAATTAACAGTTGTTGCTACGCAATGCTTTAAATCACTTCCAGCCTATTTTCTTTTCTTAATATTTAAGCGACTGTTTCCCACAAAATTTGAAAATAAACTAATGATATCCGCGTTATAAATTTATGTACATGTTTCTTTGGCACACGAGAAATCTTAAACTTGCGTATGTCTGATGTAACTATATATTTCTTATTTTTGGGAGGGAGAATTGAAGTCTGTTTACCTGTTTGCAGGATGTTTATCTTAGGTGTCCTATCCCATTTGTGTCCAAGCATGATACTGATTGTTGTGCAATTTCTCATGCATGGGCCATGTCAACTATGCTGTCAGTAAGTATATTGATGTGCTTGCAAGTATATCTGTGGGTGGGTGTGTGAGTATATGCGTGCACATTCTGATTATTTATTTTGGCTCTTTCTGAAGCGTAAAGTAACTTCAATGTATTGCAAGAGAGAGACTGAACAAAAATACAAGTTTCTTTGTAAACTTATCACATTTAAACCCTACATTAAGGTATGTGTATTATCCATTATCCTTAGCAAGTTAAGATGGTACTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTGAGGTAATGATGAAAATTTACATGTTCTCTTTCTATTTATTCTTGAGTTTATCAAATTAAATGTGTCTTCATTGTGTAGGATGACAAGGAAATGCTACGTGAAATAGCTTACCTATTAACTTCCCGGGAAGATATTCATTGTGTGCAGGTATCTTTACCTTTGAGTTTTTACGTTCTCAGGAACATATTCATTTTGTGCAGGTATGCTTTACCTTTGAGTTCTCATGCTCTTGAGTACTTAATGAAACTAGTGTTCTTCTCTGCAGTCCTTCCAGCCTGTCTCCAGCGACTTTTGGCTGCATTTACAACCTTATGCCCAGAATTATATTGAGGTCAAGAACGCAAGTTCTGGGGTATGCTATACAATCATACTAATACTAATGTCAAGCATATTTGTGCTTTTCATCAGAAAATAAACAATTCTGCTTAGATGCTATTCACTGTATATGTTGTTATCCTACTAGCTTGTAGCTCATGGGTATATTTTTTTTCGTTGTTGCCGGCTTCTCTAGAAGCATTAAGATGATCATAGCAGTGGTAGCTTCAATGTTATTTGCTGGCAGATAGTTTGTAGTTAATAATTAAGAAATCACCATATATGACCATCTGCTCAAGTACCATGTTCGGTTATTGGTTACTCCCCCAGTATGACAGGGTAAAAGAACAAATAAGGTTGCATGAAGCATTTGATACACATTTGGCCTCTGGTGCATTGGATGATCATGTTCGTCAGATTAGTTCTTCAAAGGTAGGAAATATATTATGAACTTATTGTGCGTACAAAAACAGGGCTACCACATTTTGCTCAACTGCTTATCAATTGTTGTACCTATGGTTCTCAGGATAATTTCGTGAAGATTATGCTTGATGATGATACTTTGCATAGTCAGTTTATAGATCTGGATTATGATCTCCTGAAATTGTCACATGAGGTGCTATTTTCCTGACATATTTTCCTTATTCACAAATTATTTCCTAAGTATTTTCATGATAACTTTGTGCCCTTTTACAGCGATGAGCTAAACTTCTTAGTAAACAAGATCAATTATGCTTATATTACAAACACATGAAATGTGCTGTCGTAAATTTGCAGGTATGTGATCTATATGTCCTGCTTGTCCTTAATGTTCACTAAAGTTACCTCAAAGTTTTTTTTCCCCTCAAATTACTAGCATTCTTGTTGTTACTTAATCACGGAGTGAAGTTAATTTGTTAATTTGTATCGCTCTATGTATTTAACATGCTATAGCATCCTATCTATATGTTTCATTCTCATTTTTTTTACTTGATACTGCAATATCACATGACTATGTCGAAAGCTAAAAGCTGTTCCAAATGAGTTACCAGCTATATCATTTGCCAAGTAGGCTATGCATTTCACTTTTGCTAACAAAAGAGTCAATGTAAAATTTGTGGTTGCCATTTTCCATATAGTTTTTGAACCAAGATTCAAGGATCTAGTGGATAGTTTGGCATATTTTTGTTTATTTTTTTATTTGTACGATGTTTTCTATTTTTTTAATTATTTTGGTGTAATAACGAAACAAATTGTCTGTTGATGCCCATTGCTTCCAGGTTTAACACTTGAAAAACGTGTTGAAGCCAACATGCATTAATTTATGAAGTGACAACTATATGAGCTTGGATATGGTTTCTTAGCTAATTGTGATTGTATAAATTTTCAGCATAGAGATAGACTTGAAAGTTTGATATGTGAGCTCGAGTCAGAAGGTTTCTTCCGTGTGGATGATGATTCTATTGAATGGGTACTTATGGCACTAATAGTGTTTTACTTTTGCTTTATAGTGCATGCAAAATCAATAAGCGCTTTATCTAATTCTATGTTTTATTTTTTATATGCTTGCATTTGTAGGAAAAGGAACACTTTTCAGAACTTGTGGACGAATTCAATGAGCATATTTTTGCTGGGATTCACCTTCCAAAATATTATGTTATTCGTGGAGTTATGGTCTGATCTTTTCTCATGCCTCACCATCGTTTGTCTGTTAACTAAAATAGTGAAACCTGATTCAATGTGTTAAATATCAGGATTATCGGGAAATGTTACATATGAAGGATAGCACTTGGGATGATGCTTTCACAGTGGTAGGATATGCCATCTCTTTGAATTGGTGGATTTTCCTTGTGAAACAAGTCCATATTATCATTTATTGGTCCATATTATCATTTATTGGTTTGTTTCAGGTTGTTGGTGGAGCATTCTGTAGATGGATGGAAGATCGTGATCTGGTATTGAAATATGCTCACAATTTGCCTATTGGTTCTATTGTATTTCTTTATATTTTATTCATGTTCGTTCATTTTGTTAGTTTTGGATGGAGACAAGATACTATAGGCATCGTTACTATGACATCATTCAAGAGCCAGTAAAAATGGTATTGACCCATATTACCTCCATCTTCTTTCTTGCTCCAGAGAACCTGGAGACACCATTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035339

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA035339&oldid=37315"