BGIOSGA035423

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Revision as of 09:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035423| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035423, complete gene.| tag = OS11G05...")
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Gene Name

BGIOSGA035423

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035423, complete gene.

LocusTag

OS11G0549605

Ensembl Transcript ID

BGIOSGA035423-TA

Ensembl Protein ID

BGIOSGA035423-PA

Length

4881

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:17091203..17096083

Sequence Coding Region

17091203..17092768,17092872..17093000,17093086..17093157,17093238..17093441,17093933..17094208
,17094300..17094408,17094995..17095128,17095777..17095863,17095958..17096083

Genome Context

<gbrowseImage1> name=IndicaChromosome11:17091203..17096083 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:17091203..17096083 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCGGCCGAGCAACCGGGACTGGTCGGACTGCGACCCGACGTTCGCCGCGGAGGCCAACGCGGCGATCCGCGCGCTGCGGGACACGGGCGCGGGCGCGGACGCGCGCGCGCGCCGGCTCGCGGCGAGGCTCGTCGAGAGGTACCCCGGCTCGCCGCTCGCCCACACCATCCTCGCGGAGGGGCACCGCGTGCGGGGGCGCCTGGAGGGGGCGAGGTCGAGCCTCGAGCGCGCGGCGGCGCTCGCGCCGGGGTGCCCGCGCACCGCCTTCATGCTCGCCGCCGTGCTCACGCGGATGGGCCTGTTCGACGAGGCGATGGAGGTGTGCGACCGCAGCCTCCGCGTGCCGCAGCCCACCGACCCGGCGCGCCACCTCCCCTACCCGAGGAAACGCATCGTCCCCAAGGACGCGGAGCATAGGATCGCTTATACCCGACAAGGGATCCGTCGGCTGCGTCTCGGGGCCGAGAAGTGCAGGCGAACCGCGGTTCCACTTCCACCGGAGTCCGCGTTGCCCGCGCCGGACTGGCCGCCGGAAAGCGACGAGGCCAACCACCAGGTGGCTCGCGATCTCTGGCGCGGCATGAGCGAGGAGGAGCAGCAAGCCTTCCTGAAGGTGAGCTTTCAAGATATGAAGTCGTACTGCCGCTCAGGAGGGGAGCTAGAGATGATAAGTTTGCTCTCGGATGCCGAGCACGACCAGTTCGTCAAGTTATCTGCGTCGTCTTCGTGTTGGACTTGCCCTTTGTGCGGGTTCAAAATTATCCTTGATGAAGAGCGCTTCATGGTGCACATGGAGAACTTTCACATTGAGCATGAGGAGTACAAAAAATTGCGGTCATCATTACCTAAAAGAATCCCTGACAATGAGATGGAGCTTCTCAAATCATGGAGATGGGAACCGATGCCAATCGATGGAGATGATTTGGCAGAGAGGACAGAGATCTTGAGCAAGCTTAAGAAACTTGTTTCTCAGCTCATTGATATGGAGGCCGTCTCTCTGTGCCTTCTGTATATCATGCACAAGTTCATAATGAGGCGGGTCAGGCCGGTGACACCATTGGTAGTATCCATGTGCGCGTGCTGTGGGATCAGACAGTTGAGTTCTGCTCACCTCAAGGAACTGTATGAATTTCTCCAGAAGCTTACACCTATCCTTGCAGATTATGTACATCAGAAGGCTCAGAATGGTGAACAAGAGAGCCAGCAGGATTCGCATTCGCTTGCTGTGACTACCTGGTTGAAAGAGACAGGCACCTTGTCTTTTGATTATGGGAAGATTGTGTCAAGAAACACTGATGGTTCTAGCAACCCAGATGAAATTGTTGATGGTCTATTCCACGAATCTTTGCTTGAGGATCCCTTGGTATCATGGGGTGGTGTGTGGCAAAGATGTCTTGATCTTGGACCTGATATCCTTAACAAGATAAGTGAAGCATTGAATAAACTGAAGGTTAACTGCAGCTCATGTGAAGAACTAAAACAAAAACTCGGAGATGTTTATTTCCTTCCTGACGCAATCTTTGAGACTGATATTGACGTCAAGCCTTATTTTGATGATGGGATTGGCTCTGTACAAGTTGAAATGCTATTAATTGATGCTGAGGTGGATTACCAGAAGAAAATGCTTTTGGAAGCCTGTAAAGTGGATTATCTTGCAGCCATTTTACCTATTGCAAAGGCTTGCCTTCGGGCCAAAATGAATAATAACCTTCGTCCACCAAATGGTCTTGAACTACAAGCACCTTTGAATGTTATTCTCCGGTCTTTGTGGCACATAAGGCGATTCCATGATACTCTCCAGAAGATACCATCTAAATGCACTGATGTTAAAGATGGAAACTCTCAAATTGGGAAGACATTGTGTAAAATCTTTGATTCTTGGGATAATGAGAAAGCGGGCAAACCATGTGACCCGTGTGATTCAACAAGATTTGCAGATTTTACAAATTCTCTGGTTTATAAAAAGGATGGACAAAGGAAAACTGCAATTGACATTGTGAAATTTATCTTTCGGAGGCTGCACTCATCACAAACTCCTTTGCATTTTGTGTTTAAGGGTGAAACTTTGGACCATCAAACACCAGTCGAGCCATCCTTCCTGGGTTGTATATGCCTAGTGCATGATCTTTTTGGGTTGCACATTTATGAAAATAAATTCAACTGTGTGAATGAGGTGTACACCGAATATCAGTATACTACATTCCTCCACAGCATTGATTTGGGTGCTGTTGGAAAAACTAAGGTGGAATCTTTCAGTGAACTCTTGAAAGCTCGGAAGTCCAGGATTGAAAGTTGTGGGCATATGGTTTCCCAGTACTCTCTTGAATGTCCACCACGTTTGTTCATGACCGTTTTTGAATGGAAGGAAGACAAGGTGGGCCACATTAACATGCATGAAGTATTGATGAGCCTAGCTGTAGAGTTGGACATTAGTCATTTCTATGGAGATCTGCATTCAGGAAGCAAGTATACTCTGGTTTCTGCGGTCTGCTGTAATGATCAGGGGCAATACTTTTGCTTTGCTCGCGGCAACAACAGATGGCTCATATATGACAACAACAGAAGACCCATGTATGCTGAATCCTGGGAAGCATCAATCCAGCAGTACAGTCAGGCCAACCTCTGTCCTGAAATCATCTTCTTTGAGCGTGTCGAGGATCCAGAATTGGGCACCCACCGCGACCAGACTGCGCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MERPSNRDWSDCDPTFAAEANAAIRALRDTGAGADARARRLAARLVERYPGSPLAHTILAEGHRVRGRLEGARSSLERAAALAPGCPRTAFMLAAVLTRMGLFDEAMEVCDRSLRVPQPTDPARHLPYPRKRIVPKDAEHRIAYTRQGIRRLRLGAEKCRRTAVPLPPESALPAPDWPPESDEANHQVARDLWRGMSEEEQQAFLKVSFQDMKSYCRSGGELEMISLLSDAEHDQFVKLSASSSCWTCPLCGFKIILDEERFMVHMENFHIEHEEYKKLRSSLPKRIPDNEMELLKSWRWEPMPIDGDDLAERTEILSKLKKLVSQLIDMEAVSLCLLYIMHKFIMRRVRPVTPLVVSMCACCGIRQLSSAHLKELYEFLQKLTPILADYVHQKAQNGEQESQQDSHSLAVTTWLKETGTLSFDYGKIVSRNTDGSSNPDEIVDGLFHESLLEDPLVSWGGVWQRCLDLGPDILNKISEALNKLKVNCSSCEELKQKLGDVYFLPDAIFETDIDVKPYFDDGIGSVQVEMLLIDAEVDYQKKMLLEACKVDYLAAILPIAKACLRAKMNNNLRPPNGLELQAPLNVILRSLWHIRRFHDTLQKIPSKCTDVKDGNSQIGKTLCKIFDSWDNEKAGKPCDPCDSTRFADFTNSLVYKKDGQRKTAIDIVKFIFRRLHSSQTPLHFVFKGETLDHQTPVEPSFLGCICLVHDLFGLHIYENKFNCVNEVYTEYQYTTFLHSIDLGAVGKTKVESFSELLKARKSRIESCGHMVSQYSLECPPRLFMTVFEWKEDKVGHINMHEVLMSLAVELDISHFYGDLHSGSKYTLVSAVCCNDQGQYFCFARGNNRWLIYDNNRRPMYAESWEASIQQYSQANLCPEIIFFERVEDPELGTHRDQTAP</aaseq>

Gene Sequence

<dnaseqindica>1..1566#1670..1798#1884..1955#2036..2239#2731..3006#3098..3206#3793..3926#4575..4661#4756..4881#ATGGAGCGGCCGAGCAACCGGGACTGGTCGGACTGCGACCCGACGTTCGCCGCGGAGGCCAACGCGGCGATCCGCGCGCTGCGGGACACGGGCGCGGGCGCGGACGCGCGCGCGCGCCGGCTCGCGGCGAGGCTCGTCGAGAGGTACCCCGGCTCGCCGCTCGCCCACACCATCCTCGCGGAGGGGCACCGCGTGCGGGGGCGCCTGGAGGGGGCGAGGTCGAGCCTCGAGCGCGCGGCGGCGCTCGCGCCGGGGTGCCCGCGCACCGCCTTCATGCTCGCCGCCGTGCTCACGCGGATGGGCCTGTTCGACGAGGCGATGGAGGTGTGCGACCGCAGCCTCCGCGTGCCGCAGCCCACCGACCCGGCGCGCCACCTCCCCTACCCGAGGAAACGCATCGTCCCCAAGGACGCGGAGCATAGGATCGCTTATACCCGACAAGGGATCCGTCGGCTGCGTCTCGGGGCCGAGAAGTGCAGGCGAACCGCGGTTCCACTTCCACCGGAGTCCGCGTTGCCCGCGCCGGACTGGCCGCCGGAAAGCGACGAGGCCAACCACCAGGTGGCTCGCGATCTCTGGCGCGGCATGAGCGAGGAGGAGCAGCAAGCCTTCCTGAAGGTGAGCTTTCAAGATATGAAGTCGTACTGCCGCTCAGGAGGGGAGCTAGAGATGATAAGTTTGCTCTCGGATGCCGAGCACGACCAGTTCGTCAAGTTATCTGCGTCGTCTTCGTGTTGGACTTGCCCTTTGTGCGGGTTCAAAATTATCCTTGATGAAGAGCGCTTCATGGTGCACATGGAGAACTTTCACATTGAGCATGAGGAGTACAAAAAATTGCGGTCATCATTACCTAAAAGAATCCCTGACAATGAGATGGAGCTTCTCAAATCATGGAGATGGGAACCGATGCCAATCGATGGAGATGATTTGGCAGAGAGGACAGAGATCTTGAGCAAGCTTAAGAAACTTGTTTCTCAGCTCATTGATATGGAGGCCGTCTCTCTGTGCCTTCTGTATATCATGCACAAGTTCATAATGAGGCGGGTCAGGCCGGTGACACCATTGGTAGTATCCATGTGCGCGTGCTGTGGGATCAGACAGTTGAGTTCTGCTCACCTCAAGGAACTGTATGAATTTCTCCAGAAGCTTACACCTATCCTTGCAGATTATGTACATCAGAAGGCTCAGAATGGTGAACAAGAGAGCCAGCAGGATTCGCATTCGCTTGCTGTGACTACCTGGTTGAAAGAGACAGGCACCTTGTCTTTTGATTATGGGAAGATTGTGTCAAGAAACACTGATGGTTCTAGCAACCCAGATGAAATTGTTGATGGTCTATTCCACGAATCTTTGCTTGAGGATCCCTTGGTATCATGGGGTGGTGTGTGGCAAAGATGTCTTGATCTTGGACCTGATATCCTTAACAAGATAAGTGAAGCATTGAATAAACTGAAGGTTAACTGCAGCTCATGTGAAGAACTAAAACAAAAACTCGGAGATGTTTATTTCCTTCCTGACGCAATCTTTGAGACTGATATTGACGTCAAGCCTTATTTTGATGATGGGGTATCACCTTCCTTTTTACTGCATTCTGTTTGCTCTCCAGTTCTGTTAAAATGCATTTTAAACTTGTTGATCAATGCTGAAATCCCACTTGCTGTATTTGCAGATTGGCTCTGTACAAGTTGAAATGCTATTAATTGATGCTGAGGTGGATTACCAGAAGAAAATGCTTTTGGAAGCCTGTAAAGTGGATTATCTTGCAGCCATTTTACCTATTGCAAAGGCTTGCCTTCGGGTTAGTACAGTACTTCTATCACCAACTGAACTCGTATTCACTTTTTCCATAACTTTTTCTTATGTATGATATTTAATGTTGACAGGCCAAAATGAATAATAACCTTCGTCCACCAAATGGTCTTGAACTACAAGCACCTTTGAATGTTATTCTCCGGGTAACTTGTGTTTGCCTCGTTCAGTTTTTTATATTTAGCTATTGGTTTACTTTTCTCTAATTTTCTCTGACTATCTGCAGTCTTTGTGGCACATAAGGCGATTCCATGATACTCTCCAGAAGATACCATCTAAATGCACTGATGTTAAAGATGGAAACTCTCAAATTGGGAAGACATTGTGTAAAATCTTTGATTCTTGGGATAATGAGAAAGCGGGCAAACCATGTGACCCGTGTGATTCAACAAGATTTGCAGATTTTACAAATTCTCTGGTTTATAAAAAGGTCTGTTGCGTTCACTATTTGTCCCACCTATCTAATTGCAAATCTGTGGCCTCCAGCAAACAGTAACAACGTTCTTTTGTAACCAAATTGTAACCGTCTCCATGTTGTCTACACTCTACTCTTAGATCTTAGTTATATCAGATAAGTTGTTAATATAAATAAAGTGGATGAGCTTCTATTCCTTATGCTTGTTCTGACTCCATTGTCCCCTTGAGCAACTCTTTTGGCCATTTTGTGCACCTCAATCTGCAGTTCTTTGGAGTAGATTAGATTAAAATCCTGTTTTTCTGGATAGAATATGACAGATTAAATTCTGCTGATGATCCTGTCACTAATTTGATCCATGAATCACCTTTATGTTGTCTCTAGACTACAGACCAAGTTCTGTTCCACATGCATTTCTGAGTGCATATTGACTGTAACATACATTTTTTTGTGCCTCTTGCTGTCATAGGCTCGTAGCTAATCAGTAAATCGGTTGTTGTTTGCAGGATGGACAAAGGAAAACTGCAATTGACATTGTGAAATTTATCTTTCGGAGGCTGCACTCATCACAAACTCCTTTGCATTTTGTGTTTAAGGGTGAAACTTTGGACCATCAAACACCAGTCGAGCCATCCTTCCTGGGTTGTATATGCCTAGTGCATGATCTTTTTGGGTTGCACATTTATGAAAATAAATTCAACTGTGTGAATGAGGTGTACACCGAATATCAGTATACTACATTCCTCCACAGCATTGATTTGGGTGCTGTTGGAAAAACTAAGGTGCGCACTGCACAGTGTATCCATTTCTCCTTTCCCTTTTTATGTATTTGGTTCAATTAGTTAGTAAACTAACATCTTTTCACTTATTCAGGTGGAATCTTTCAGTGAACTCTTGAAAGCTCGGAAGTCCAGGATTGAAAGTTGTGGGCATATGGTTTCCCAGTACTCTCTTGAATGTCCACCACGTTTGTTCATGACCGGTAGGGTTGTCTTTTCGACTGATATTCAGAATGTAATTATGTATATATCTTTCCTCTATTTAGGAGAAAAATGTAGGTCAATTAAAGGAATCATGTGATCAGTATGCCATATGATTTTTTATTGCTGAAAACCAAATCAACTATTGAATATAAACATACCATATGTGCTAGTGTAATGATAATACAAAGTAATTAATGCCATGACATACTCCTGAGTTAATTTGAAATCAGCCTTCCGTACCCAGAGACAATTTTATTCATTTCCTACAATTTAGGGAGCACCTAGGATGAAATAAGTATTGTTTTTATTAATATGAAGAAAGGAACTATGGAGGACTCTTAAGCTAAGTAATGGTGATTTTCCATGTACCGATCAGTACAGCATCTGCAGCTTTCATGAACTAGTAGAACAGAAAATATCTAGGAGGAACTAGATATATTGTTTCATTGAGGAGAACACCTCGATGAACTTGATATCTGGGTTTGGATCTCACATGTACTGAGCTTAGCTCTCCTCCTAAGTCCTAATGATAAGCTTTACACTTAAAACTTATTTGCTTTCTTTTCTTTTGCTGCTTTCTCACAGTTTTTGAATGGAAGGAAGACAAGGTGGGCCACATTAACATGCATGAAGTATTGATGAGCCTAGCTGTAGAGTTGGACATTAGTCATTTCTATGGAGATCTGCATTCAGGAAGCAAGTATACTCTGGTTTCTGCGGTATGTGCTGAGACAATCCTTTGCTATCTATGTTCCTGAGGTTAACATGTGCTTTGCTTTTCTTCTACGTTTTAGTGTGCTATCAACCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTAAATTACTTGGAAGGTGTTCAACTGTCATGATAATTAGAGGTGTGAATCCTCTATGACCGCTCTGCTAACAAATGTTAAGACTGGCTGTTATTCTTCCCTGGGATACACACATGATCATTTCTACTTTTTGTTTACTACAGATCCTTAAGTAAGCCCCAGATGAGATTTTAATATGGACTGCAATTTATACTTGTCAAATTAGTTGATTGAAATCATGAAATGTTCCATTGATTTCATCTTGAGAAAGTGGCGCTTCTGGTACATCATTGTAAATTTTGTGATATTTTCTTTTTCGACTGCTCAGTTGCTTGGCAATAGATGCTACACTGGTTCATTACTGTCAGGTTATCCCAAATGATAATACTTGCCTTACCAGCGCGGAGTTTTATTTCTGTTATTCTTGCAATACATCCTGTCTAATGCCTACCTTGGTAATTTTCACACTGTTTGTCAGGTCTGCTGTAATGATCAGGGGCAATACTTTTGCTTTGCTCGCGGCAACAACAGATGGCTCATATATGACAACAACAGAAGACCCATGGTAATTCCCGATCAACTTTGCGTATTTATGTTTTGACTCACATTTGGTCGAGCATTACTCGATATCATTATTTGTGTTTGTTTTGTCCTTCCAGTATGCTGAATCCTGGGAAGCATCAATCCAGCAGTACAGTCAGGCCAACCTCTGTCCTGAAATCATCTTCTTTGAGCGTGTCGAGGATCCAGAATTGGGCACCCACCGCGACCAGACTGCGCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035423