BGIOSGA035445

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Revision as of 09:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035445| Description = BGIOSGA035445| Definition = Oryza sativa Indica Group BGIOSGA035445, complete gene.| tag = | tid = BGIOSGA035445-TA|...")
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Gene Name

BGIOSGA035445

Description

BGIOSGA035445

Definition

Oryza sativa Indica Group BGIOSGA035445, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA035445-TA

Ensembl Protein ID

BGIOSGA035445-PA

Length

3979

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:17489249..17493227

Sequence Coding Region

17489249..17489305,17492241..17492484,17492646..17492831,17492959..17493227

Genome Context

<gbrowseImage1> name=IndicaChromosome11:17489249..17493227 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:17489249..17493227 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCACCAGCACCAGCGCTAGCCCCCGACGCCGCCGCACTCCAGCTGCAGGCTATAAGGACATTTATTATTGATATTGAGCATGTAGGTGACAGGACCTATCACACTTTAATGAGAAGCATTCATGAGTACAATTTGCAGAACTCTCCATTCACGTGCCTCAATGCTGCGGTAACACCAGCTGGTGGATATCATATGATCTTATTGTACAAGGGACAAAAGTCTGTTAGGCTGCTCTTCAGGGACTCGGACGGATATCTTGTTGCTGTTGAAGATGACTTGGGTTCTTGGTACGATTCAAGTTGCAATCCTATCCTGAAGCTCATTACCTCTATTGTGTATTTCAGACCAGTCACCGTGGGCCCGAAAGCTTTGAATGATCTCTTCTATCGTCTTTTGAAGTATGACAACAATGCAACCCTTGGCAGTCAGACTCTTGAATTGCAAATGAAAGCACTGTACCGAGCATGCTTAATGCTTGGTTTGTGTCGAAAAGATTCAAGGTATTCATGGATCTGGAGTTTCCAAGTGATCTGTGGAAGCTTGTCCACAACTGGGGGCCATGTGTCTAAGTACATCATCTTCTGCTACGACAACAACATGCTAGAGGCACCACAAGTGGACAATGCTGAGTCCATGTCACTCATGAGGATTATGTCTTTCATCGAGATCCANGGTCAAAGAATCATCTACACCCCCACAGATGCAGCTGGACCAGGTGGGGCCCTCCTCCTGGTGAAGGCAAATTAA</cdnaseq>

Protein Sequence

<aaseq>MAAAPAPALAPDAAALQLQAIRTFIIDIEHVGDRTYHTLMRSIHEYNLQNSPFTCLNAAVTPAGGYHMILLYKGQKSVRLLFRDSDGYLVAVEDDLGSWYDSSCNPILKLITSIVYFRPVTVGPKALNDLFYRLLKYDNNATLGSQTLELQMKALYRACLMLGLCRKDSRYSWIWSFQVICGSLSTTGGHVSKYIIFCYDNNMLEAPQVDNAESMSLMRIMSFIEIXGQRIIYTPTDAAGPGGALLLVKAN</aaseq>

Gene Sequence

<dnaseqindica>1..57#2993..3236#3398..3583#3711..3979#ATGGCCGCCGCACCAGCACCAGCGCTAGCCCCCGACGCCGCCGCACTCCAGCTGCAGGTACGATCTAACTACGACTCTCCCCTCCCTGAATCGACTTCGTTTTTGCGAGATGATGAGACTAATTTTTTGAGTTTTATAGTGCAGAATCCGGACAAAATTTACAAAGTGCTACCGAGATCCTGTCTGTCTCGATCCCTGGTGTTTGGATTTGGTTGTTCCTCGCGATTGCATTTTGGTTCCTTGTTCATATATGCGTATATGTGTGCTCGGAAATTCGTGGATATGCATATGCTGTAAGGTGTTGCACCCCTTGGTGCTTGGATCAGAATGTCGTGCATATGCATATATGCATATGCATATGCATATGCTGGAAGGTGTTGGTCCCCTTGGTGCTTGGATCAGGATGTGGTTTGGTTATTCGCCGCAGTTGGTTTTCTTGTTAATATGTATTCGGAATTCGTGGCTATATCGGAAGGTGTTGTCGCCGGATCTGTGGTTCACTCAGAATGAATTGGTGATTTTGAGGTACAATCTGTCATTTGGCCATGAATTCGTGGCATTATCGGAAGGTTTGCATTTGTTTTCGTTACACATTTGATGGTAATAGTTGTTGTACGGTTCTGTGGCAAAATCTATTCAAGGTAGTTAGATTAAATTTATTCAAGGTTTGCCATGATGTTGAGTACTTCACACGGAAGGTAATTTCTGAAGATATTCATTTTCCTTTCCCTGAACAACCAACAAAAACTGCTAGTCACTAAAGAACAGTGGTTAAAATATTTACATATATTTATTTCCCCAAAGGTTAGGCTGATTAATAGGAAATTACCACATGATAGATCTATAACATGATATGGTAACAACATATGAGTCCTTTTTATAATTTATTTACTCTTCTTTCTCCTCAAAAGGTTCTTTGACGCTTGGTAATATTGTCTTTAATTATTGCTACCTGCTTTGAACCAAGTGTGCAAAAACTCTGCGGTTGCATTTGAAATGTTCTAGATGTGTTAATTGTGGCACACAAGTCATCTTACTGCTGGTTGCCTTTTGGTTATTTGGCTACACCATTCAATGATGGTGTTTTGTGGCAACGTTTAGATCCAGAAATCATCTGCAGGTTTGACCATCGAGCTATGCTTGCCCAGGTGTTCCTTGCAACATCAAAATTAATTCAACTGTGTACCACCATCTATTGTGCTTGCCAGAATAGTTGGCCTGTTCTCGTGTGAGACTTATTCTTGCAGCGTGATCATGTCCATCAATATGCCATGCAAAAAACTATGTCATTGCTGTACTTGCTATCCATACCTTGGTGATTTTAAGATTTAAGTCGCTAATGATTCATAGAACTTTCCTCAAGTATGCTGACTATTGGCAAATAGTGGCCATCCCTATACCAACACGTTGCCATCTGGGATCACTCCCAGCTTTATCTGCTGAAATGATAAATTCTTGTAGTTCTATGGCTTTGAAAACTCAATCTATCAGTCTCATCTGCCATTGCCTTTTTTTTTTCTCATGATAATCTTGCTTTTCCTCCTGACGAAATCAAATAGCTTCTGGCAGTGGTCTTAGGTTGCTATCTGCTTAACCACCTCAAAAGCTACTGCTTTTATTTATATTGTGATTTTGGTCAGAGTTCCAATAGCCAATAGGCATTCTGTCACCTTTGTCCCAAGGAACCTCTTTACGTGTCCACAATCAATTGAGTTCCATGTATACAACCAAAGCCATTATAACTGTTGCACTAATAAAGAAGATATTGGTAATCAATTCTAAGATTTTTCTTGGAACTAAAGCTCAAGTAAGAAAGCATTTCACATCCAGAGTTAAACTGTAGCTACTTATACATTCTAGATTTCTAGTGAAACTATAGCTACTGATATATTCTAACTCCATCAGCACATTTTTTGGCTCGAATGTGTAGTTTAGCTTCTTTGTCATTCACCATTTGACTCACTTCATAAGGAAATAAATCTTAACCTCTGATTAATGAATGACCATTTTCGCATACTTAATACTAACCTTCAGATGCTACTTGTTTTTTCTTACTATTAAGTTGATTCAATATGCCTTCCTGCTGCTAGGTTCACCGCACATTATATTGTTCAGATTCCATTATTTTAGAAGTCCTTTTGCAAAAAAAACAAACGAATAAAGAAACATTAATGAAATATAGAATTGTTGTTCAAAAATAAGCAAAACTTTATCTTTTTGAATATTAAGATATTAAATGTGAAAATCCATACTCTGGCTGATTTTTTTTGTGACACTTGATAGGCAAGAAAAATTAAAAGAAATGCACTTGATGCCAAAAAAAAGAGAAAGAAATGAAGATCCCGCAGGACTGGGGTAGGCTAGTCTGATAGTTTAGATGGTTTCAATATATTTGTTGTGCTGTTGGCTTGAAAATCCATACTCTGGCTGATTTTTTTTGTGACACTTGATAGGCAAGAAAAATTAAAAGAAATGCACTTGATGCCAAAAAAAAAAGAAAGAAATGAAGATCCCGCAGGACTGGGGTAGGCTAGTCTGATAGTTTAGATGGTTTCAATATATTTGTTGTGCTGTTGGCTTTATACCTTTTGGGAACCTGTAACCTGTGGTTTCATTTTGTCTCCCTCAAATGACTGGTGGTTAGGAAGTTTACTTGAGTTCCGAGTACTATAATCAATAGTGCTCAATATGTTGGGTCTTTGTTTGATCGCAACCTAAATTATAAGCAGGCATCCACAGCAAACATATCTTATGTTTGCTTTCTTAAAATCAGGGCCCTCGAGCCTTTTCTCTTGAAGACAACTTGATAGTAATAAATCAAAATGCAACTCCTTATTTAACTGCATTTTTTGTTCTTTTTATGTATTCTTTTACCTTTGGAAAGAACATATTTGCAATCTACATTATTGTGCAATAAGGACATTGTGCAATAAGAGCAATGTTAGCAATGTTTTCCTGAAACTGCTCTTATGTATTTTTCCTACCTTTGCAGGCTATAAGGACATTTATTATTGATATTGAGCATGTAGGTGACAGGACCTATCACACTTTAATGAGAAGCATTCATGAGTACAATTTGCAGAACTCTCCATTCACGTGCCTCAATGCTGCGGTAACACCAGCTGGTGGATATCATATGATCTTATTGTACAAGGGACAAAAGTCTGTTAGGCTGCTCTTCAGGGACTCGGACGGATATCTTGTTGCTGTTGAAGATGACTTGGGTTCTTGGTACGGTTCAAAGATATACCAGAGCTACCATTCATTAATTCAGCTGAAATGAAAATGGAATCAGGCTATGGAGACATGGAGACGAGTGAAAAGTAAGGATATCAAAACTCTGTTTCCTCTAGCGTGTTACAATCATATTTCATCTGTTCCATATGTTCTTTTCTAGATTCAAGTTGCAATCCTATCCTGAAGCTCATTACCTCTATTGTGTATTTCAGACCAGTCACCGTGGGCCCGAAAGCTTTGAATGATCTCTTCTATCGTCTTTTGAAGTATGACAACAATGCAACCCTTGGCAGTCAGACTCTTGAATTGCAAATGAAAGCACTGTACCGAGCATGCTTAATGCTTGGTGAGGGTCCGAGAATCCGTCATGTAAGAAGGTTTGTACAAACAATCCATCTGAATATGATTATCTTGAATAGCAATTATGGCATACTGAGTATTATTACTCATTGCCTCTGTGTATTGCTTGATAGGTTTGTGTCGAAAAGATTCAAGGTATTCATGGATCTGGAGTTTCCAAGTGATCTGTGGAAGCTTGTCCACAACTGGGGGCCATGTGTCTAAGTACATCATCTTCTGCTACGACAACAACATGCTAGAGGCACCACAAGTGGACAATGCTGAGTCCATGTCACTCATGAGGATTATGTCTTTCATCGAGATCCANGGTCAAAGAATCATCTACACCCCCACAGATGCAGCTGGACCAGGTGGGGCCCTCCTCCTGGTGAAGGCAAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035445