BGIOSGA035466

From RiceWiki
Revision as of 09:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035466| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035466, complete gene.| tag = OsI_365...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035466

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035466, complete gene.

LocusTag

OsI_36526

Ensembl Transcript ID

BGIOSGA035466-TA

Ensembl Protein ID

BGIOSGA035466-PA

Length

4276

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:17991531..17995806

Sequence Coding Region

17991531..17991675,17992015..17992136,17992472..17992580,17992663..17992702,17993508..17993597
,17993651..17993810,17993919..17994058,17994653..17994755,17994930..17995441
,17995530..17995806

Genome Context

<gbrowseImage1> name=IndicaChromosome11:17991531..17995806 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:17991531..17995806 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAAGCGGAGGGAAATCCGGGAGCTTCGCGACCGGATGGACCGGACGCTGGCGCTGCCCGACCTCGCCGACGAGGAGTTGCTGAGATCTCTCGTGAAGAGGCAGATTCTTGCGTCGTCGCTGTCCGCCGGCAACGATGAAGGCAATATTGACCTGATTGCTGAAGCAAGGTCTAAAGAGATCTCGAATTTTCTTGAAATGCTAAATACTTCGGGGAATGAACGATCTTCGAAGATTCATGAGGCATCACATAAAGAATGGAAGGTGAAGCAAGACACGGACCAATTACGAGTTATGTATCGCGAGGGACCAGAGGGGACCCCATTTCACACCCTCCTTGCTGAAGGCTTTGCTGATGGACCAATTGATGTTTGTACATGTGTTTCATGGGAATCGTCTCTGTACAAAAAATGGTTTCCACAATACAACCTTCCAACTTTTAAAGTTGCTCAGTCAGGCTGTTTGAAGAAGGTTCGGGTTGGTGAAGAAATTTCTTTGGTCAGTTGGATTTTCTCTTTGATGGATGTTGTGACTAACATCTGCATCCACTATTTGGAAGAAAGGGTGAAGGTTCCATGGCCAGTTTCGGAGAGAGAAGCTCTTCTTCACTACTTCGAATTAGAGTATCTTAAAGAAGATCTTGTCATTGTAATCATGAAAACTATATCGGATACGGACAATATAAATATAGAGACACATGGATTTAGTAGGGATGGAATTCCTGAAGCTGGTGACACCGTTCGGATAGATGTAGTCGGAGGCTTTGTTTTGCAAAGGATTACAAAGGAGAAAAGCTTTTTCAGGGCAATAGCTAATATGGATATTAAGCTAGACTTCGTTCCACCATGGCTTATCAACTTCATATCAAGGCAACTAATTGGCAGCGGCCATAAACTGTATCAGAAGGCAGTCAGTACTGTGGCAAATTGTGATGAGGATTACAAGAAAGCTTTGAGAGAACCACTCTATGTTAGAATCCGTGAGCACCGGGGTTCTACTGACATCGCAAATGTCACTCCAGTGGAGGAAAGGGCAACAGAAGCCCTCCCTGACAATCCCACTTTGCAGAATGTTCTCGCGGTTACTAATATCACCTCGAACAGTGAGATAGTCGAAGAGGAGAGTGAACAGAAGGCATTATTCAAGCTGGATCATCATGCAATAGGCCCTTCAAACCCTCCGGCTGAGCAAGAGCAACATGTTGAAAATAAGCCTTACATTAGTCCTGAGGTAGAGCAGGCTTTGAACATATTGGACAAAGCTATTGCAATTATCCGAGGCAACAATGCTGGAAGTGCCAGTGTGGTCCAAAAGTTTATCGGTTACGATGTAACTTTAGATGGCAGTACCACTGACTCTAGAAATTCACACAATATTCCAAATGAACATCCTGCTACATTGCCACCTCGAGATTCAAGAGAGACCCAGCACACTTATTCATTGTCCAATGAGAATGTTAATCATAGGGAGAAAGATGCTCTTGACAGTGACTCGCAACGATACACAACAGCTTCTACCGTAACAAAAACTATGTCCATGACAAGGAGGAGCACGACACGGGTGCACGGAGAAGAGAGCCTTGACACCAATGGCTTACATCAGAACAGTTTCCACAAGGACAAAGAGTCTAAACGAACAAGGAAAAGGAAGACAAACAGTTGGCTCTGCTGCTTAACCCCTAGCACCACAGGATGA</cdnaseq>

Protein Sequence

<aaseq>MEKRREIRELRDRMDRTLALPDLADEELLRSLVKRQILASSLSAGNDEGNIDLIAEARSKEISNFLEMLNTSGNERSSKIHEASHKEWKVKQDTDQLRVMYREGPEGTPFHTLLAEGFADGPIDVCTCVSWESSLYKKWFPQYNLPTFKVAQSGCLKKVRVGEEISLVSWIFSLMDVVTNICIHYLEERVKVPWPVSEREALLHYFELEYLKEDLVIVIMKTISDTDNINIETHGFSRDGIPEAGDTVRIDVVGGFVLQRITKEKSFFRAIANMDIKLDFVPPWLINFISRQLIGSGHKLYQKAVSTVANCDEDYKKALREPLYVRIREHRGSTDIANVTPVEERATEALPDNPTLQNVLAVTNITSNSEIVEEESEQKALFKLDHHAIGPSNPPAEQEQHVENKPYISPEVEQALNILDKAIAIIRGNNAGSASVVQKFIGYDVTLDGSTTDSRNSHNIPNEHPATLPPRDSRETQHTYSLSNENVNHREKDALDSDSQRYTTASTVTKTMSMTRRSTTRVHGEESLDTNGLHQNSFHKDKESKRTRKRKTNSWLCCLTPSTTG</aaseq>

Gene Sequence

<dnaseqindica>1..145#485..606#942..1050#1133..1172#1978..2067#2121..2280#2389..2528#3123..3225#3400..3911#4000..4276#ATGGAGAAGCGGAGGGAAATCCGGGAGCTTCGCGACCGGATGGACCGGACGCTGGCGCTGCCCGACCTCGCCGACGAGGAGTTGCTGAGATCTCTCGTGAAGAGGCAGATTCTTGCGTCGTCGCTGTCCGCCGGCAACGATGAAGGTTTGGGGGCTTGATTTGGTTTCTTTTCTTCTTCTCTGGATCGAGTAGGTTAGCTTGTTGATGTAATTAATGTTGTGCTTTTTGTGTACTTTAGTTTTACCTTATCTGTGCTGCACGTGAGCTGTTATGGTTGCAGTTGAGAAAATATTCTCTCATGTGATGTCGTTTAGATTCTATTGTTTCATCGTCTATGTGTGAATATCCTACTGGTTCCTGAATGATTGCTACTATTTCAGTTGATTGTTTTGAAAGATCTATTTGAGTTGATCATAATCAGGCTGCTTGTGTGATCTCTCTGTTGTTGGTTTTTCTTATGATTTGGTTTTGTATCATTTTTAGGCAATATTGACCTGATTGCTGAAGCAAGGTCTAAAGAGATCTCGAATTTTCTTGAAATGCTAAATACTTCGGGGAATGAACGATCTTCGAAGATTCATGAGGCATCACATAAAGAATGGAAGGTATGCATTGAACCAAAGTAAAACATTTAAAGAATATGTTCTGCGTGTATGTGATTAGAGCACAAAGAAATGGATCTTTACTTTGCACCAAAAAATGTGATGTATTCATTGTTTTCTTGCTTACTTATTCATATGCCATGTTATGATCAATCTCCAGAGCGTAAGGATGCATTTATGCTTGCAATTTCTGCCTCATTTATATTATTTGCGTCAGAATTTGCTGTTATCATGTCTTCTTCTCCCTTCTTTTTGGGAGTGATTAAATTGTCTGTTACATTCCCATGCAAATTGTACTATATTGGTGCAATGATATGCAGTTACTCTCTGTTCTGTAGGTGAAGCAAGACACGGACCAATTACGAGTTATGTATCGCGAGGGACCAGAGGGGACCCCATTTCACACCCTCCTTGCTGAAGGCTTTGCTGATGGACCAATTGATGTTTGTATGAAATCTAACTAGTAGTGAGTAAAATGCTATGGTCTCACAATACACACAGTCACTTAAGCACACTGTTTTTTGCATAGGTACATGTGTTTCATGGGAATCGTCTCTGTACAAAAAATGGTGAGCACATTCATTAAGGACAACTTCAGATGTTGTTCGCCTAGAATTTTGCATCGTCGGACACTATATTTGTTACTAAAAAAAAGTTCATGGAGGCAGCATCAGGACCTGCTTGACTCAGCTTTTACTTTAGCATGTGGAATCAACACAAAAACTTTTATCTAGAACATGGCAGTACAGCTTTTTACTACTTTTTTTTTTTTGATAAAGGAAGCTTTTATTAATCTCAGACGATTACATCAAGTTGATAGAACCATACTAAGAAAACTACTTAGAGAATGGATAATCTATACACAACAATTTCAGATATTCAGATTATCAGTTTCTTGTGTTTTTTTACTCAATTTCTTTACTGCTGTTTTTTGTTCTTCACGAAGTGCACTCACATGACTCAATTTCTTGTTGAGTTAACACATGACTGTTCTTAATTGAGAAGTGTACTCAAATATTGCCTATTTTGCTTATAGCAGTCACTCTGCGATATGGCCCACATGTACCTACTTTAGCAACTACCTGATGTTGCACCATTGCTCATGTAAAGTCCCTTTCTGCAGTAAGCTGACAAAGACAACATAATGTTCATTTCAGCCATATGCATAAAGATTGGACTAATTGTTGCCAACAATGTTTGCAAAAAAAAATTGGGGATAATTCTATGGCTTACTTTCGACTACTTTTTATGAAACATAACATGTTTGCCAGCGGTATACTAAAGTTTTGGCAGCCCCACTGAACCCAAGAAACAAAAAGGATAGACAAATGGGTACTTTCTTTCTCATATGCTGATGTGGTTTTTGTGTTCCAGGTTTCCACAATACAACCTTCCAACTTTTAAAGTTGCTCAGTCAGGCTGTTTGAAGAAGGTTCGGGTTGGTGAAGAAATTTCTTTGGTCAGGTTGGCTAAAGATAAATCTTCTTTACAGTCCATGATTTTTCTACAAATTTTAGTTGGATTTTCTCTTTGATGGATGTTGTGACTAACATCTGCATCCACTATTTGGAAGAAAGGGTGAAGGTTCCATGGCCAGTTTCGGAGAGAGAAGCTCTTCTTCACTACTTCGAATTAGAGTATCTTAAAGAAGATCTTGTCATTGTAATCATGAAAACTGTGCGTATGCTGAATTTTCTGGGCTATTTATTTTTTATGAACCTTGATCCACAGACTTCATTGTCCATGCCTCCAGTTCATTTATTTCTGCTTATTGCGTTGTTGCAGATATCGGATACGGACAATATAAATATAGAGACACATGGATTTAGTAGGGATGGAATTCCTGAAGCTGGTGACACCGTTCGGATAGATGTAGTCGGAGGCTTTGTTTTGCAAAGGATTACAAAGGAGAAAAGCTTTTTCAGGTAAAACATCCAATCCTATTGTGCATTGAATTATTTAATATAAAGCACGAAGATTCATTATAGATCGCTCCATTTGCTATTGAAATTGTACCCACTTTTGTTGGAAACTTGGAATCAAATTAGTGATTCTGTCAACCAAAGTGATTTTTTAGTGACTGTAAAAGGACTGGATGACTTTGTCCTAGAAAAAGGTAGAGTTCCATTAAGTTTTTTCATTTTTCTATGACGTACTTCTGACTTGATATGCATGTTCTGGATACATGCTATAATTTTTATTTTACTAGTTAATTTTTCATTATTAAGCCATGTTATTCCTGTACTTGTGAGTTGAGCTGTAGAATTTGTTTTACCTGCTTAATTTTAATTGTTTAGCAATATATAATTTTCATCATTCTTGCGTCTTGAATGCTAGTTTACATGATGTCTTGACTCCATTTTTTTGAACAGATTGTTATTAAATCACGTTTGAACTTTAAGAAAGATATAATTGTATGTAGTTTTTAAAATTTATTCATTTGTGATTCTTTTTGCTCAACAAGTTTCAGTTTAATAAATATGCTGATACTCCATTTTTTAACCAAATCCTCCACTCAGGGCAATAGCTAATATGGATATTAAGCTAGACTTCGTTCCACCATGGCTTATCAACTTCATATCAAGGCAACTAATTGGCAGCGGCCATAAACTGTATCAGAAGGTCAGTGGCATACTACCTCGATACTTTTGTGATGATTTGATATCAATATGCATAGCGCTTTTCCCATTGCAGTATGGTCTTTACATAGATTTCGTGGTACTGCTATGTGGGGTGAGCAAATTCTGACACAAGAGATCCCCTGTTTAAACACTTGCTATTGACTTATCTTTGCAGGCAGTCAGTACTGTGGCAAATTGTGATGAGGATTACAAGAAAGCTTTGAGAGAACCACTCTATGTTAGAATCCGTGAGCACCGGGGTTCTACTGACATCGCAAATGTCACTCCAGTGGAGGAAAGGGCAACAGAAGCCCTCCCTGACAATCCCACTTTGCAGAATGTTCTCGCGGTTACTAATATCACCTCGAACAGTGAGATAGTCGAAGAGGAGAGTGAACAGAAGGCATTATTCAAGCTGGATCATCATGCAATAGGCCCTTCAAACCCTCCGGCTGAGCAAGAGCAACATGTTGAAAATAAGCCTTACATTAGTCCTGAGGTAGAGCAGGCTTTGAACATATTGGACAAAGCTATTGCAATTATCCGAGGCAACAATGCTGGAAGTGCCAGTGTGGTCCAAAAGTTTATCGGTTACGATGTAACTTTAGATGGCAGTACCACTGACTCTAGAAATTCACACAATATTCCAAATGAACATCCTGCTACATTGCCACCTCGAGATTCAAGGTCAGCACTAAATGATATTAATTTCTTCTGTGGTACATTTGCACTAAAGTTGATGCACAGTTATTACATGGTATGTTTCTTAATGCAGAGAGACCCAGCACACTTATTCATTGTCCAATGAGAATGTTAATCATAGGGAGAAAGATGCTCTTGACAGTGACTCGCAACGATACACAACAGCTTCTACCGTAACAAAAACTATGTCCATGACAAGGAGGAGCACGACACGGGTGCACGGAGAAGAGAGCCTTGACACCAATGGCTTACATCAGAACAGTTTCCACAAGGACAAAGAGTCTAAACGAACAAGGAAAAGGAAGACAAACAGTTGGCTCTGCTGCTTAACCCCTAGCACCACAGGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035466