BGIOSGA035477

From RiceWiki
Revision as of 09:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035477| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035477, complete gene.| tag = OsI_365...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035477

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035477, complete gene.

LocusTag

OsI_36554

Ensembl Transcript ID

BGIOSGA035477-TA

Ensembl Protein ID

BGIOSGA035477-PA

Length

2294

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:18280449..18282742

Sequence Coding Region

18280449..18280736,18281380..18282186,18282380..18282742

Genome Context

<gbrowseImage1> name=IndicaChromosome11:18280449..18282742 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:18280449..18282742 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGACGCTGGAACAGCTGAACGCCTTGGTGGCGCAGGCGCAGGAACAAGCGATCGCGCCCGGCGAGCTGCTCGATCCGCTACTGATGCCGATGGACAGCCCGGTTGAGAACTATCCGGAAGTGAATTTGCTGCCGGTGGTGGCGGGTTACGTCAAGCAGGGGCAACCGGTGCAAGTGGCCGGCGCGCCGGCATCCGGCCTGGTGCGTATCACCGAGGGTGAAGAGCGAAAATTCATCGGCGTTGGCGACATCGCCGAGGATGGTCGCGTGGCGCCGCGCCGCCTGGTGAACCCGGAAATCGTTGCGATGATCGGTGCCTCTGCCGCCCTGAGCCTGTCCGGTATTCCGTTCAACGGCCCAATCGGCGCCGCGCGCGTAGGTTACATCAACGATCAGTACGTACTGAACCCGACGACCGACGAACTGAAAGAAAGCCGTCTGGATCTGGTGGTTGCCGGTACCGCCGGCGCGGTGCTGATGGTGGAATCCGAAGCTGACGTGCTGAGCGAAGATCAGATGCTGGGCGCCGTGGTGTTCGGCCACGACCAGCAGCAAGTGGTTATCGAAAACATCAACGCGCTGGTTGCCGAAGCCGGCAAGCCGAAGTGGGATTGGCAGGCGCCTGCGGTCAACGAAGCGCTGCACGCGCGCGTGGCTGAACTGGCCGAAGCTCGCCTGGGCGACGCTTACCACATTACCGAAAAACAAGAGCGTTACGCTCAGGTTGACGCGATCAAAGACAGCGTGGTTGAAACCCTGCTGGCGCAGGACGAAACGCTGGACGCCGGCGAAATCCAGGACATCCTGGGCACCGTCGAGAAGAACGTGGTGCGCAGCCGCGTACTGCGTGGCGAGCCGCGTATCGACGGCCGTGAAAAAGACATGATCCGTGGCCTGGACGTGCGCACCGGCGTACTGCCGCGCACCCACGGTTCTGCGCTGTTCACCCGTGGCGAAACTCAGGCGCTGGTTACCGCGACCCTGGGCACCGCGCGCGACGCACAGAACCTGGACGAGCTGATGGGCGAGAAGACCGACAGCTTCCTGTTCCACTACAACTTCCCTCCGTACTCCGTAGGCGAAACCGGCATGCGAGAAATCGATCCCAAGAAGGCCGAGGTAGCGCTTCAGCAGCGCTATGACAAAGCGGACAGAGGGCAATGGGGATGGAATATTGTCGAATTCTACCTGGGCAAGATCAGCGAAAAAACGCTGATGGAACGCCTCAAGGCAGATGCAACGGATAACACTTCGCTCGCTGAGCATCTCAGTGAAACTGACTTCTATTTGGGTAAACACTACCTGAGTCTGGGGGACAAGGACACCGCTTCGGCGCTGTTCAAACTGACGGTGTCTAACAACGTTCACAACTTCGTTGAGCACCGCTATGCATTGTTGGAATTGGCGCTTTTGGGCCAAGAGCAAGACGACCTATCGGAATCGGACCAGCAATAG</cdnaseq>

Protein Sequence

<aaseq>MVTLEQLNALVAQAQEQAIAPGELLDPLLMPMDSPVENYPEVNLLPVVAGYVKQGQPVQVAGAPASGLVRITEGEERKFIGVGDIAEDGRVAPRRLVNPEIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTTDELKESRLDLVVAGTAGAVLMVESEADVLSEDQMLGAVVFGHDQQQVVIENINALVAEAGKPKWDWQAPAVNEALHARVAELAEARLGDAYHITEKQERYAQVDAIKDSVVETLLAQDETLDAGEIQDILGTVEKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQNLDELMGEKTDSFLFHYNFPPYSVGETGMREIDPKKAEVALQQRYDKADRGQWGWNIVEFYLGKISEKTLMERLKADATDNTSLAEHLSETDFYLGKHYLSLGDKDTASALFKLTVSNNVHNFVEHRYALLELALLGQEQDDLSESDQQ</aaseq>

Gene Sequence

<dnaseqindica>1..288#932..1738#1932..2294#ATGGTGACGCTGGAACAGCTGAACGCCTTGGTGGCGCAGGCGCAGGAACAAGCGATCGCGCCCGGCGAGCTGCTCGATCCGCTACTGATGCCGATGGACAGCCCGGTTGAGAACTATCCGGAAGTGAATTTGCTGCCGGTGGTGGCGGGTTACGTCAAGCAGGGGCAACCGGTGCAAGTGGCCGGCGCGCCGGCATCCGGCCTGGTGCGTATCACCGAGGGTGAAGAGCGAAAATTCATCGGCGTTGGCGACATCGCCGAGGATGGTCGCGTGGCGCCGCGCCGCCTGGTGGTTGAGCATTTCGACTGACGGCGGGGCACTGCGTCGCCTTGCGATCGCACTGCGCTAAGAGTAGAATGGCGCAGCTTATGCATTGGGTTGCTGAATTAGAGATCGGCGCCTGTTTTTATTATCTATAATCTGGAGTATTACAATGTCTCTAAGTGTTGAAGCTAAAGCTCAAATCGTAGCTGATTTCGGTCGTGGTACTAACGACAGCGGTTCTACCGAAGTTCAGGTTGCCCTGCTGACTGCGCAGATCAACCATCTGCAAGGCCACTTCTCCGAGCACAAAAAAGATCACCACAGCCGTCGTGGTCTGTTGCGTATGGTTTCTCAGCGTCGTAAGCTGCTGGACTACCTGAAGCGTAAAGATGTAGCACGTTACACCAGCCTGATCGAGCGTCTGGGTCTGCGTCGCTAATCTAGCAAGTTTCAGTGGAAAAGGGGCCTATTTTGGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATCGACCGCCCGATCCGTCCACTGTTCCCGGACAGCTTCCTGAACGAAGTTCAGGTGATCGCGACCGTGGTTTCCGTTAACCCGCAGGTGAACCCGGAAATCGTTGCGATGATCGGTGCCTCTGCCGCCCTGAGCCTGTCCGGTATTCCGTTCAACGGCCCAATCGGCGCCGCGCGCGTAGGTTACATCAACGATCAGTACGTACTGAACCCGACGACCGACGAACTGAAAGAAAGCCGTCTGGATCTGGTGGTTGCCGGTACCGCCGGCGCGGTGCTGATGGTGGAATCCGAAGCTGACGTGCTGAGCGAAGATCAGATGCTGGGCGCCGTGGTGTTCGGCCACGACCAGCAGCAAGTGGTTATCGAAAACATCAACGCGCTGGTTGCCGAAGCCGGCAAGCCGAAGTGGGATTGGCAGGCGCCTGCGGTCAACGAAGCGCTGCACGCGCGCGTGGCTGAACTGGCCGAAGCTCGCCTGGGCGACGCTTACCACATTACCGAAAAACAAGAGCGTTACGCTCAGGTTGACGCGATCAAAGACAGCGTGGTTGAAACCCTGCTGGCGCAGGACGAAACGCTGGACGCCGGCGAAATCCAGGACATCCTGGGCACCGTCGAGAAGAACGTGGTGCGCAGCCGCGTACTGCGTGGCGAGCCGCGTATCGACGGCCGTGAAAAAGACATGATCCGTGGCCTGGACGTGCGCACCGGCGTACTGCCGCGCACCCACGGTTCTGCGCTGTTCACCCGTGGCGAAACTCAGGCGCTGGTTACCGCGACCCTGGGCACCGCGCGCGACGCACAGAACCTGGACGAGCTGATGGGCGAGAAGACCGACAGCTTCCTGTTCCACTACAACTTCCCTCCGTACTCCGTAGGCGAAACCGGCATGGTCGGTTCTCCTAAGCGTCGTGAAATCGGTCACGGTCGCCTGGCGAAACGCGGCGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCCTTCCGTTCGTTATGGCTGTATCTGGTGGAGCGAGAAATCGATCCCAAGAAGGCCGAGGTAGCGCTTCAGCAGCGCTATGACAAAGCGGACAGAGGGCAATGGGGATGGAATATTGTCGAATTCTACCTGGGCAAGATCAGCGAAAAAACGCTGATGGAACGCCTCAAGGCAGATGCAACGGATAACACTTCGCTCGCTGAGCATCTCAGTGAAACTGACTTCTATTTGGGTAAACACTACCTGAGTCTGGGGGACAAGGACACCGCTTCGGCGCTGTTCAAACTGACGGTGTCTAACAACGTTCACAACTTCGTTGAGCACCGCTATGCATTGTTGGAATTGGCGCTTTTGGGCCAAGAGCAAGACGACCTATCGGAATCGGACCAGCAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035477