BGIOSGA035506

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Revision as of 09:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035506| Description = BGIOSGA035506| Definition = Oryza sativa Indica Group BGIOSGA035506, complete gene.| tag = | tid = BGIOSGA035506-TA|...")
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Gene Name

BGIOSGA035506

Description

BGIOSGA035506

Definition

Oryza sativa Indica Group BGIOSGA035506, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA035506-TA

Ensembl Protein ID

BGIOSGA035506-PA

Length

1158

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:18583671..18584828

Sequence Coding Region

18583671..18584828

Genome Context

<gbrowseImage1> name=IndicaChromosome11:18583671..18584828 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:18583671..18584828 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGTCACCACCATTCCATTCTGGCATTCCATGGAAGGGGAGTTGGGTAAAGAAGTTGACTCCCTGGCGCAGCGTTTCAACGACACCCACCCGGATTACAAAATTGTGCCGGTGTACAAAGGCAACTACGAGCAGAGCCTGAGCGCGGGCATCGCCGCCTTCCGTACCGGTAACGCCCCTGCACTGTTACAGGTTTATGAAGTGGGTACCGCGACCATGATGGCCTCCAAAGCCATTAAGCCGGTCTATGAAGTCTTCAAAGAGGCGGGCATCAACTTCGACGAGTCGCAGTTCGTGCCAACCGTGGCGGGCTACTACACCGATTCCAAAACCGGTCACCTGCTGTCTCAGCCGTTTAACAGCTCCACGCCGGTCCTGTACTACAACAAAGATGCCTTCAGAAAAGCCGGTTTAGATCCGGAGCAGCCGCCAAAAACCTGGCAAGACCTGGCGGAATACACCGCTAAGCTGAAAGCGGCGGGCATGAAGTGCGGCTACGCCAGCGGCTGGCAGGGCTGGATCCAGATTGAAAACTTCAGCGCCTGGCACGGCCTGCCGGTTGCCACCAAAAACAACGGCTTCGACGGCACCGACGCGGTACTGGAGTTCAACAAGCCGGAGCAGGTGAAGCACATTGCGCTGCTGGAAGCGCTCAACCAAAAGGGCGATTTCAGCTACTTCGGCCGTAAAGACGAATCCACTGAGAAGTTCTACAACGGTGACTGCGCCATTACCACCGCGTCTTCCGGTTCGCTGGCAGATATCCGTCACTACGCCAAATTCAACTACGGCGTGGGCATGATGCCGTACGACGCTGACGTGAAGGGCGCGCCGCAGAACGCCATCATCGGCGGGGCCAGCCTGTGGGTGATGCAGGGCAAAGACAAGGGCACCTACAAAGGCGTGGCCGAGTTCCTCGACTTCCTGGCGAAGCCAGAGATTGCCGCTGAGTGGCACCAGAAAACCGGCTACCTGCCGATCACCANAGCCGCCTATGACCTGACCCGCGAGCAGGGCTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGTAATTCGTCCGGTTTTAAAAGTGTTTTTAAAAGTTTAGGGTGTGAAATATCTGGTCAAACCGTCGGGATCCGGTTTTAA</cdnaseq>

Protein Sequence

<aaseq>MAVTTIPFWHSMEGELGKEVDSLAQRFNDTHPDYKIVPVYKGNYEQSLSAGIAAFRTGNAPALLQVYEVGTATMMASKAIKPVYEVFKEAGINFDESQFVPTVAGYYTDSKTGHLLSQPFNSSTPVLYYNKDAFRKAGLDPEQPPKTWQDLAEYTAKLKAAGMKCGYASGWQGWIQIENFSAWHGLPVATKNNGFDGTDAVLEFNKPEQVKHIALLEALNQKGDFSYFGRKDESTEKFYNGDCAITTASSGSLADIRHYAKFNYGVGMMPYDADVKGAPQNAIIGGASLWVMQGKDKGTYKGVAEFLDFLAKPEIAAEWHQKTGYLPITXAAYDLTREQGFXXXXXXXXXXXXXXXXXGGNSSGFKSVFKSLGCEISGQTVGIRF</aaseq>

Gene Sequence

<dnaseqindica>1..1158#ATGGCTGTCACCACCATTCCATTCTGGCATTCCATGGAAGGGGAGTTGGGTAAAGAAGTTGACTCCCTGGCGCAGCGTTTCAACGACACCCACCCGGATTACAAAATTGTGCCGGTGTACAAAGGCAACTACGAGCAGAGCCTGAGCGCGGGCATCGCCGCCTTCCGTACCGGTAACGCCCCTGCACTGTTACAGGTTTATGAAGTGGGTACCGCGACCATGATGGCCTCCAAAGCCATTAAGCCGGTCTATGAAGTCTTCAAAGAGGCGGGCATCAACTTCGACGAGTCGCAGTTCGTGCCAACCGTGGCGGGCTACTACACCGATTCCAAAACCGGTCACCTGCTGTCTCAGCCGTTTAACAGCTCCACGCCGGTCCTGTACTACAACAAAGATGCCTTCAGAAAAGCCGGTTTAGATCCGGAGCAGCCGCCAAAAACCTGGCAAGACCTGGCGGAATACACCGCTAAGCTGAAAGCGGCGGGCATGAAGTGCGGCTACGCCAGCGGCTGGCAGGGCTGGATCCAGATTGAAAACTTCAGCGCCTGGCACGGCCTGCCGGTTGCCACCAAAAACAACGGCTTCGACGGCACCGACGCGGTACTGGAGTTCAACAAGCCGGAGCAGGTGAAGCACATTGCGCTGCTGGAAGCGCTCAACCAAAAGGGCGATTTCAGCTACTTCGGCCGTAAAGACGAATCCACTGAGAAGTTCTACAACGGTGACTGCGCCATTACCACCGCGTCTTCCGGTTCGCTGGCAGATATCCGTCACTACGCCAAATTCAACTACGGCGTGGGCATGATGCCGTACGACGCTGACGTGAAGGGCGCGCCGCAGAACGCCATCATCGGCGGGGCCAGCCTGTGGGTGATGCAGGGCAAAGACAAGGGCACCTACAAAGGCGTGGCCGAGTTCCTCGACTTCCTGGCGAAGCCAGAGATTGCCGCTGAGTGGCACCAGAAAACCGGCTACCTGCCGATCACCANAGCCGCCTATGACCTGACCCGCGAGCAGGGCTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGTAATTCGTCCGGTTTTAAAAGTGTTTTTAAAAGTTTAGGGTGTGAAATATCTGGTCAAACCGTCGGGATCCGGTTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035506