BGIOSGA035542

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Revision as of 09:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035542| Description = BGIOSGA035542| Definition = Oryza sativa Indica Group BGIOSGA035542, complete gene.| tag = | tid = BGIOSGA035542-TA|...")
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Gene Name

BGIOSGA035542

Description

BGIOSGA035542

Definition

Oryza sativa Indica Group BGIOSGA035542, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA035542-TA

Ensembl Protein ID

BGIOSGA035542-PA

Length

2164

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19363354..19365517

Sequence Coding Region

19363354..19363579,19363796..19363929,19364910..19364990,19365431..19365517

Genome Context

<gbrowseImage1> name=IndicaChromosome11:19363354..19365517 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:19363354..19365517 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACTGCTCATCATATAGAACCGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTGGAAGCATTTTGCAGATCAAGTCCTTTGCAGAGCTTCCGGTTCTATATGATGAGCAGTCATGCTTTGAGGCCAATTGCGAGCATTGTGGAAGTCCAAAAAACACTGATGTTTTTCCTTCAAATACACCACATTTCTTCACAATAGGTTTAGACTGGTCTGGTGGCTGTGAAAACCAGGTTGAGCTATCTGAAGTTCTGGTTGGCATTGCACATCCCCTTGATATTAAACTTCTTTGCAAGGGTGTTCACTCCTCAGCAAACTATTCTCTGACCTCAATGATCTCCTATGCTGATGGGCGCTACATCTGCTTTGCGCGCGACCAGGACAAGTGGCTCAGCTCTGATGCCAAAACTGTTGAGACAAAAGATTCTTGGGAGCAGTTGCTTGAACGCTTCAGAGACTGCACGCTCGAACCTGAAGTTCTATTCTTCGAGGTCATCAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MTAHHIEPEXXXXXXXXXXXXXXXXXTGSILQIKSFAELPVLYDEQSCFEANCEHCGSPKNTDVFPSNTPHFFTIGLDWSGGCENQVELSEVLVGIAHPLDIKLLCKGVHSSANYSLTSMISYADGRYICFARDQDKWLSSDAKTVETKDSWEQLLERFRDCTLEPEVLFFEVIK</aaseq>

Gene Sequence

<dnaseqindica>1..226#443..576#1557..1637#2078..2164#ATGACTGCTCATCATATAGAACCGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTGGAAGCATTTTGCAGATCAAGTCCTTTGCAGAGCTTCCGGTTCTATATGATGAGCAGTCATGCTTTGAGGCCAATTGCGAGCATTGTGGAAGTCCAAAAAACACTGATGTTTTTCCTTCAAATACACCACATTTCTTCACAATAGGTAAAGGTTCTTGTCTACAATAGTAGATTGCACTTTACTATTCAGTGCCCTATTCCACTGCCGAATCGGTATCTCAAATACTGAGGTCTACATTAATAAGTGTGATATGATTTTGTACTATGCTGGTTAAGAGGCTTTTTATCCATTCATAATTTTTGTTATAAAGTTAATATCAAAATGTTTGTTTCATTTTCTGTTTTCACCAACATGTTGCAGGTTTAGACTGGTCTGGTGGCTGTGAAAACCAGGTTGAGCTATCTGAAGTTCTGGTTGGCATTGCACATCCCCTTGATATTAAACTTCTTTGCAAGGGTGTTCACTCCTCAGCAAACTATTCTCTGACCTCAATGGTATGTGCGCATAAAACCCTTTTTTTTGTATATGAATTGAATTGGTTATATAACAGAAAAAATAATGTTATCCTTGATTGTCATGCTAAGGAAATGCAAAACGAGTGTGAAAACCAGTGAGCTGTATTGTATTGGCTGATATCATTGTCTTGAGAGTTCTGTCTCATTATGTTCCTTGACTGGTATTATCTTAATTATTTGGATATACTCGTAAGGTGTGAGAGGTCACAAGGACATTGCGTGTAATGCTTATCTTAAAAGAGATGGTGTTAGTCTGAAACAAGGTTTTTGCTAGAATGAAGTGAACCGAAGTTATAGTAATTGGTGTTTACTAGATCCAAATTGGCTAGGCTTCTGTGGATAATGGATTCGAGCTATGAATCATAATGTTCATATCTGAGTTGGGACATATACTCATGATGATTTTGGGAAATATTTGAGTCCATCTTGTCAGCGAAGTTATTCTTTCTATACCTTACTGATCTCCAAAATTGGAAAAGTTTGAAGACAAGAATTTGAGCAAGAGTTGGTAGTCCGTGTAGGCAGTACTGGCAATTGCAAAGAATATCACGAGTGATTTCACTCTCACTGAACTTTTTATCAGCATGTTCATTGATTGAGTATTAAAATGGAGTACCATGGCTGGGTAAAATCTTTATTGGACTTCTTTTTATCTCTGTTACTGTCCAGTTGTCTTGATATATTTGTCCTTCGCTTTTTGTCTGAATTCTAAATTATCACCATTAGAAATCATATGTTGTGGAGCAGAACTTTTGCATCATACTGTTCTTTTTTTTTGTTTCAATAAATTATAAAGTTATTCCCTTGGTCTATTAATTTTTACTTCAGCTCTTCTGCATGGTTTTTTGGGTGCTACTTAACCTGCCCTGCTTATACTTACCAACATAACCATGCCTGATAAATATATCACGCTTTTACATGTCAAAGTTATTTATTCCCTATTATTTAAACCTCTGCAGATCTCCTATGCTGATGGGCGCTACATCTGCTTTGCGCGCGACCAGGACAAGTGGCTCAGCTCTGATGCCAAAACTGTTGAGGTAGATAACTTGCTCTCCTGGCCTCTGCAGCAGCAAAGTGAGACCCTGTTTAGATGGGACTAAAACTTTTAAGTCCCTGTCACATCGGATATTTGGACACTAATTATAAATATTAACATAGACTATTAATAAAACCCATCAATAATCTTGGACTAATTCGCGAGACGAATCTATTGAGCCTAATTAATCCATGATTAGCCTATATAATGCTACAATGCTACAGTAAACATTCTCTAATTATGGATTAATTAGGTTTAAAAAATTTGTCTCGCAAATTAGCTTTCATTTATGTAATTAGTTTTGTAAGTAGTCTATATTTAATACTCTAAATTAGTGTCTAAATATAGAGACTAAAGTTAAGTCCCTGGATCCAAACACCATCTGAGGCTTCTTGATTCTGATATCCTCTCTGTGATTCTGAGCTTGTTAACTCTGTACAGACAAAAGATTCTTGGGAGCAGTTGCTTGAACGCTTCAGAGACTGCACGCTCGAACCTGAAGTTCTATTCTTCGAGGTCATCAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035542