BGIOSGA035564

From RiceWiki
Revision as of 09:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035564| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035564, complete gene.| tag = OsI_367...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035564

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035564, complete gene.

LocusTag

OsI_36729

Ensembl Transcript ID

BGIOSGA035564-TA

Ensembl Protein ID

BGIOSGA035564-PA

Length

5071

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19775980..19781050

Sequence Coding Region

19775980..19776210,19777638..19777720,19777813..19777897,19778253..19778543,19778640..19778730
,19778876..19779233,19779476..19779751,19779839..19779999,19780116..19780219
,19780660..19780743,19781030..19781050

Genome Context

<gbrowseImage1> name=IndicaChromosome11:19775980..19781050 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:19775980..19781050 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCGGAGGAGCGAACGACGACGGCGCCGCCGCCGCCGCCGGCGAGCGGCCGACGCGCGAGGTGGCGCGTCGCGGAGCACACCCGCGCCAGCTGCACCACCGTGGTGGCGAACACGCTCTGCACGCTCCTCCTCGTCCTCCTCCTCGTCGCCGGCGTCGTCCTCTTCGTCGTCTGGCTCAGCCTCCGCCCGCACCGCCCGCGCTTCGCCGTCGTCTCCTTCACCGTCGGTCTCATTGGACGATTTGGTTCTTCAAATAAGAGGACCATTAACATACTGCAAAATGTTAGTGGCATCATCAAGCCATCCAGGATGACACTTCTTCTTGGGCCTCCATCCTCAGGAAAGAGCACACTAATGCGAGCACTTACAGGGAAGCTTGATAAAAACCTCAAGGTGTCCGGCGACATCACATACTGTGGACACACATTTTCTGAGTTCTACCCTGAGAGGACCAGTGCGTATGTCAGTCAGTATGATCTTCATAATGCAGAGATGACTGTGAGAGAGACATTGGATTTCTCCGGACGATGCTTAGGCATTGGTGCAAGATATGACATGCTCGCGGAACTCGCGAGAAGGGAGCGCAATGCAGGCATTAAGCCAGATCCTGAGATCGATGCTTTCATGAAAGCTACTGCAGTGCAAGGGCATAAAACTAACATCACTACAGATGTTACTCTCAAGGCACTTGGGTTGGACATTTGTGCTGATATTATTATTGGGGATGAGATGATTAGAGGAATTTCTGGTGGGCAAAGGAAGCGTGTGACAACAGGGGAGATGTTAACGGGACCAGCACAGGCATTGTTCATGGATGAAATATCCACCGGTCTAGATAGCTCTAGCACATTTGAGATTGTCAAGTATATTGGGCATTTGGTCCATGTGATGAATGAGACTGTGATGATCTCCCTCCTGCAGCCACCACCAGAGACCTACAATCTTTTTGATGACATAATTCTACTATCAGAAGGATATATAGTCTATCACGGACCACGTGAGAACATCTTGGAATTCTTCGAAAATGCTGGTTTCCGATGCCCTGAAAGGAAAGGAATCGCTGATTTCCTTCAAGAGGTCACTTCCAAGAAAGACCAGCAACAGTACTGGTACCATGACCAAGAACGGTATCGAACAAAGATGCCTAGTGGGACAATCTCTGATGGCACTAAATTCCTTGGGGCTCTCACCTTTAGTTTGATCACCATCTTGTTCAATGGCTTTGCTGAGCTACAATTGACCATAAAGAAGCTTCCTGTGTTCTACAAACATAGGGATTTCTTGTTCTTCCCTGCATGGACCTTTGGAGTAGCAAATATCCTCTTGAAAGTTCCTGTTTCTCTCGTGGAGGCGGCGGTATGGGTTGTGCTCACATACTATGTGATGGGGTTTGCACCCTCTGCAGGAAGGTTCTTTCGTCAATTTATAGCTTTCTTTGTTACTCACCAAATGGCAATGGCTATGTTCCGATTTCTTGGTGCTATTTTGAAAACAATGGTTGTGGCCAATACTTTTGGGATGTTTGTGCTGCTTATTGTCTTCATTTTTGGAGGATTTCTCATATCTAGAAATGACATCAAGCCATGGTGGATTTGGGGTTACTGGGCATCTCCTATGATGTATAGTCAACAGGCAATATCAATCAATGAGTTCCTTGCTAGTAGATGGGCTATTATTTTGAACGATGTTAATGGGAATTTGGATGCGAAGAAGGCTTGCGCTGTTGCATTGAAACTTCACAGGAAATACCTTAAAAAGATCCAGGGAAAGAAGCCATAA</cdnaseq>

Protein Sequence

<aaseq>MPPEERTTTAPPPPPASGRRARWRVAEHTRASCTTVVANTLCTLLLVLLLVAGVVLFVVWLSLRPHRPRFAVVSFTVGLIGRFGSSNKRTINILQNVSGIIKPSRMTLLLGPPSSGKSTLMRALTGKLDKNLKVSGDITYCGHTFSEFYPERTSAYVSQYDLHNAEMTVRETLDFSGRCLGIGARYDMLAELARRERNAGIKPDPEIDAFMKATAVQGHKTNITTDVTLKALGLDICADIIIGDEMIRGISGGQRKRVTTGEMLTGPAQALFMDEISTGLDSSSTFEIVKYIGHLVHVMNETVMISLLQPPPETYNLFDDIILLSEGYIVYHGPRENILEFFENAGFRCPERKGIADFLQEVTSKKDQQQYWYHDQERYRTKMPSGTISDGTKFLGALTFSLITILFNGFAELQLTIKKLPVFYKHRDFLFFPAWTFGVANILLKVPVSLVEAAVWVVLTYYVMGFAPSAGRFFRQFIAFFVTHQMAMAMFRFLGAILKTMVVANTFGMFVLLIVFIFGGFLISRNDIKPWWIWGYWASPMMYSQQAISINEFLASRWAIILNDVNGNLDAKKACAVALKLHRKYLKKIQGKKP</aaseq>

Gene Sequence

<dnaseqindica>1..231#1659..1741#1834..1918#2274..2564#2661..2751#2897..3254#3497..3772#3860..4020#4137..4240#4681..4764#5051..5071#ATGCCGCCGGAGGAGCGAACGACGACGGCGCCGCCGCCGCCGCCGGCGAGCGGCCGACGCGCGAGGTGGCGCGTCGCGGAGCACACCCGCGCCAGCTGCACCACCGTGGTGGCGAACACGCTCTGCACGCTCCTCCTCGTCCTCCTCCTCGTCGCCGGCGTCGTCCTCTTCGTCGTCTGGCTCAGCCTCCGCCCGCACCGCCCGCGCTTCGCCGTCGTCTCCTTCACCGTCGTCTCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAAAAGTCTTCCCTGTAGGAGGTTATCATATAAAATAGCTTTAAAATAATACTATACGTACCAGTTAGCGATTCCTTTTAAATTTTTGAAAAAAAAATCCTGTGATATTTAATTTGTAGAAACAAAGGGAATTTCTGGTATATTAATAATTAAGAAAAAGTAAACTCGGGGTAACAGAGGCTGGCAAACCATTGAGTAACAGAACTTGATGTAAAGGAGAGAATTAGTTAATAGCAGTCGTCACATCATAAAATTTAAATTTGTCAATGACATATTATCGTACGCAGAATATATGTTTAATCACTGGTGGTATATATATATAATAGAGTTTCTTGAAAACATATATCTATATATCTAAGTACATCTATCTCAGATTCCTTCTAGATCTTCTTTCTTACCGGAAATGATGAAATAGTGGTTGAATTGTCCTCTGAAAAATTATAAATTATATGGGCGTAATTTAATAATGAGACACTTAGACAAAGTAAGATTAGATTATTATCTTTTGTTTTGTCCAGTGGCATCTAACTTAAACCAGATGTCTAGTAAGCTAACAAGTTTGATTATTTGTGTCTTTTTTATTCGAGGATAGTCGTCACCTGCACATGCAAGCAAAGATGGGCAGCTTAGATGTGTCAAACCTTCTAGAATCCCTCCATCAAAAAAATAGGGGGAAAAAATCTTCTAGAATCCCTTAGGTTTAAGCATGCACTGCACATGGGAGATGGCCTTGCAAAATCTCAAGCAAAATCTCCAGCAAAGCACAGCTAGGGTTCATATGCATATTTTATCGCATATATAACTCGTACTCCGTGTCACTGGCTCGATCGAAGAGTTCAATCAATCAATCATCTTTGTTGTTTTGCTTAAGCAAAACTAGAGGGCAAGTGTCAGAGTGTCTCACTAACTAGCTCAAAGAGTTTGATCAATTTTCCTTCGATTTTTTTAAAAAAATTCTCGACCAGAAAGGGCATGGAGCTCCGTCTATTTAAGCATGCATGTGTTAGACGATATGTTTGTAATGATGTGGGTGTGTATATGTTTTACTATAACAAAAGGAAGAGGAGAAAAGGACGTTTAAAGAATTTTTTAAACAAGAACAGTGAAAGATGGAATTTCATCTTCAGAGGGCCATGAGGCAAAAACAAAAGCTCAAAAAAGAAGGCCAGAACAATGGATGAAGAACATCCCCCTGAGGCCCAAGTTAGAAATTGGCCTATCTTTGTGCCAAACTTCCTACTAATATGTCTTTTTTTCATGGCTATATGTTATGGTGGTGGGCTATCATCTTTTGGGCTTCGGTCCAAAAACAAATCAATTTTTGTGTGTGCTTGATGGATAGAAAATGTGATGATGTTTACTGGACAGGGTCTCATTGGACGATTTGGTTCTTCAAATAAGAGGACCATTAACATACTGCAAAATGTTAGTGGCATCATCAAGCCATCCAGGTAGAAACATACACTACTAATGTACTACTAGTTTCCATATGTTTGTATTCTAAAAGGAAGTACTGAACTATAGTTCTTTTTTCTTATTTCAGGATGACACTTCTTCTTGGGCCTCCATCCTCAGGAAAGAGCACACTAATGCGAGCACTTACAGGGAAGCTTGATAAAAACCTCAAGGTAATTAAACTCAAATCCACTCATCTGTTTAATTATTTACTCCCTCCGGGTTGATAATACTTGTTGTCTTCGAAAAAGAGCACGGTCTCCAAAAAGTAATTTTGACAAGTATTTTCTATAATAATATATATAGAAATATCAACAAATATATGATTTTATTGAAGTACTTTTTAAGACTAATCTACACATATGATTTTCATATTTTTAAGATAAATATTTTAGAAATTATTTGTAGTCAAAGGTTTTAAAGTTTGACTTTACCCTTATTCAAAACGACTAATATTATTAGCCCGGAGAGAGTACATGTTAACGCATTTCTGCCACATGCTCATTCATCCTATTGCAACCAACCCAGGTGTCCGGCGACATCACATACTGTGGACACACATTTTCTGAGTTCTACCCTGAGAGGACCAGTGCGTATGTCAGTCAGTATGATCTTCATAATGCAGAGATGACTGTGAGAGAGACATTGGATTTCTCCGGACGATGCTTAGGCATTGGTGCAAGATATGACATGCTCGCGGAACTCGCGAGAAGGGAGCGCAATGCAGGCATTAAGCCAGATCCTGAGATCGATGCTTTCATGAAAGCTACTGCAGTGCAAGGGCATAAAACTAACATCACTACAGATGTTACTCTCAAGGTGAGATTCTGATCTATCTGTTGCCTATATATATTTGTCCAAGAGGCAAATAAAAGAAAAGAAAATGCACTTTTTTTCATTTACCTTGATGTGTAGGCACTTGGGTTGGACATTTGTGCTGATATTATTATTGGGGATGAGATGATTAGAGGAATTTCTGGTGGGCAAAGGAAGCGTGTGACAACAGGTATGCATTCAAAATATTCAAACCATGATAACTTCAGTAGAATAAGTTGCAATGATTAAAATCAATTGTTTAAATTTTAGACCATTTGTTTGCTCTAATTTCAAATTAATTGTCTAGAATCATTTTTTTACTTGCTTGGCGACAGGGGAGATGTTAACGGGACCAGCACAGGCATTGTTCATGGATGAAATATCCACCGGTCTAGATAGCTCTAGCACATTTGAGATTGTCAAGTATATTGGGCATTTGGTCCATGTGATGAATGAGACTGTGATGATCTCCCTCCTGCAGCCACCACCAGAGACCTACAATCTTTTTGATGACATAATTCTACTATCAGAAGGATATATAGTCTATCACGGACCACGTGAGAACATCTTGGAATTCTTCGAAAATGCTGGTTTCCGATGCCCTGAAAGGAAAGGAATCGCTGATTTCCTTCAAGAGGTCACTTCCAAGAAAGACCAGCAACAGTACTGGTACCATGACCAAGAACGGTATCGGTATGTGTCAGTTCCAGAGTTTGCACAACGTTTCAAGTCATTCCATGTAGGTCAGAACATGCAGAAGGAGATGCAAATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACATTTCAAAGGTCACCCAGTTGATCATCCTCGCTTTCATGTCCATGACCGTGTTCCTCAGAACAAAGATGCCTAGTGGGACAATCTCTGATGGCACTAAATTCCTTGGGGCTCTCACCTTTAGTTTGATCACCATCTTGTTCAATGGCTTTGCTGAGCTACAATTGACCATAAAGAAGCTTCCTGTGTTCTACAAACATAGGGATTTCTTGTTCTTCCCTGCATGGACCTTTGGAGTAGCAAATATCCTCTTGAAAGTTCCTGTTTCTCTCGTGGAGGCGGCGGTATGGGTTGTGCTCACATACTATGTGATGGGGTTTGCACCCTCTGCAGGAAGGTAAATTTGTATGGTTCATTTTCTAGTTTTAGTGCTAAAATTTGCATACAAAGCTTCATGACGAGTTCTTCTATATATTGATTGTAGGTTCTTTCGTCAATTTATAGCTTTCTTTGTTACTCACCAAATGGCAATGGCTATGTTCCGATTTCTTGGTGCTATTTTGAAAACAATGGTTGTGGCCAATACTTTTGGGATGTTTGTGCTGCTTATTGTCTTCATTTTTGGAGGATTTCTCATATCTAGAAGTAAGTATGTTCCCATGTAAATATATTTATATTTCCTAGGAATAAGCAATGAAGAATCAATATTGGCCATTTAGTATTTATGGATGATACTAATGTCCTTGATTTGGCATGTACAGATGACATCAAGCCATGGTGGATTTGGGGTTACTGGGCATCTCCTATGATGTATAGTCAACAGGCAATATCAATCAATGAGTTCCTTGCTAGTAGATGGGCTATTGTAAGTTTCTTACCAAAACTTATATTATGTTTGATGTTTCTCTCCTCTCTCTAAATTAATCTATAGGAAACTGAGACATCTCATTCTTGTTAATGTTGTGCCATTTTAACAAAACGAAGAACATTTTTTCTTGCTGCAGCCAAATACTGATGCAACAATTGATGAACCAACTGTTGGCAAGGCTATTCTCAAATCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGAAGCTCCTGTCAGGAAGCTCGGGGGGATTGATGATGTTATTAGGGTAAGTGGATCGATCCATTCCTTTTATCTTCTTTAGAAAAAGAATTCATAAGATTGCTTCATTGTCGGATTAACATTAACATTTAATAATACGGTCTATACTAACTTGGAGTACCATATAAGAAAACTCACAACCATTGATTTCAGATTTTGAACGATGTTAATGGGAATTTGGATGCGAAGAAGGCTTGCGCTGTTGCATTGAAACTTCACAGGAAATACCTTAAAAAGGTAACTACCTGTTACAATTTCATCTTTACTAAAAGTTTAATGTAATCTACCTGTTACAATTTCATCTTTACAGTAAAGCTGTGTGCATCCTAGTTATACAGAGGCCGGGAGTTTTCTTAGTATGGTTCTGTTGATATAATCGTCTGAGATTAATAAAAGCTTCCTTTATCCCAAAAAAAAAAAACAATTTCATCTTTACTGCAGCTTATTACCATACATTGTAATGCTTGATGAAGTATTAAGGTCTACTGGTTTACCAATCGTTGTTCTCTACTTCTCTTGGCAGATCCAGGGAAAGAAGCCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035564