BGIOSGA035600

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Revision as of 09:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035600| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035600, complete gene.| tag = OS11G06...")
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Gene Name

BGIOSGA035600

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035600, complete gene.

LocusTag

OS11G0638000

Ensembl Transcript ID

BGIOSGA035600-TA

Ensembl Protein ID

BGIOSGA035600-PA

Length

5918

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:20379396..20385313

Sequence Coding Region

20379396..20379801,20380266..20380324,20380435..20380518,20380629..20380926,20381615..20381792
,20382275..20382362,20382798..20382980,20383170..20383331,20383433..20383626
,20383943..20384093,20384544..20384706,20385249..20385313

Genome Context

<gbrowseImage1> name=IndicaChromosome11:20379396..20385313 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:20379396..20385313 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCATGGCCACCACCTCCACCTCGTCGCTGCTGCCTCTCCTCCCCTCCAGGGCCCCGACCCCGACCCCTCGCCGCCGCCTCCCGTTCGCCGCCGCCGCCGCAGCGGCGCCACCTCGCCCCTTCCTCGTCTCCTCCCCTCCGCCTCCGCCCGCGCCCCGCGCCCGCCTCGCCCGCCGCGCCGCAGCGGGGGGCCTGTACGGTGGTGGTGGTGGGGAGGAAGAGGGAGACGGGGAGGATGGGGAGATAGAGGAGGAGTATTATGATGATGGGGACGAGGAGGGGGATTGGGAGGATGATGATGCGGAGGAGGGGGAGGAGATGGACGTCGAGGCGATGGAGGAGGAGGCCCTCGGCGCCGTCGCCGACCTCTCCGAGCGGCTCAGCCGCGAGCTCCGCATCGATGACGATGTTCGGGATAAAAGAAGAATCATCAGGGATAAGACATCAGCATCTAAACATATACCGGATAATCTTCTTCCAAGGGTGGCAATAATTGGAAGGCCCAATGTTGGTAAATCTGCATTATTCAATCGTCTTGTTGGGGGCAACAGGGCTATTGTTGTTGATGAACCTGGTGTGACTAGAGATCGTTTGTATGGACGATCTTACTGGGGGGATCGAGAGTTTATGGTTATTGACACTGGGGGAGTGATTACTCTATCAAAATCTCAAGCAGGTGTGATGGAAGAGCTTGCTATTACAACTACTGTTGGTATGGATGGGATTCCTCTTGCCTCTAGAGAAGCTGCTATTGCTAGGATGCCATCAATGATTGAAAAGCAAGCAGTTGCTGCTGTTGACGAAGCAGCTGTGATACTATTCATCGTGGATGGTCAGGCAGTGTCTTATCTAACGGAATGGGTATCAAAAATCTTTCAGGATGGCCTTGTGGCAGCTGATATAGAAATTGCTGATTGGTTACGTCGCAACTACTCTGACAAGCGCATTATACTTGCTGTAAACAAGTGCGAGTCTCCACGGAAAGGGCAAATGCAAGCTTTAGATTTTTGGTCATTAGGATTTTCTCCTCTGCCAATATCTGCCATTACTGGCACTGGAACTGGAGAGCTCCTTGATATGGTGTGTTCAGAGCTAAGTAATTTTGAGGAACTGGATGGAGTTGAAGAAGATGGAAACTATATTCCTGCTATTGCCATTGTCGGAAGACCTAATGTCGGGAAAAGTAGTATTCTCAATGCTTTAGTTGGAGAAGATAGAACTATTGTGAGCCCTGTTAGTGGGACAACCCGTGATGCCATAGATACCGAGTTCACCACAGAAGATGGGCAGAAGTACAAACTCATTGACACCGCTGGCATCCGACGAAGGGCAGCAGTTGCTTCTGCTGGCAGCACAACGGAAACACTTTCAGTAAAACGTGCATTTCGTGCAATCCGCCGGTCTGATGTGGTTGCCCTTGTTGTTGAAGCAATGGCCTGCATTACGGAGCAGGACTATAAAATAGCAGAAAGAATTGAGAAAGAAGGAAAAGCATGTGTAATTGTTGTGAACAAATGGGACACAATCCCAAACAAGAACCATCAGAGTACAACATATTATGAGCAAGATGTAAGAGAGAAGCTTCGCATACTCGACTGGGCTCCTATTGTTTATTGTTCTGCAACACATGGCAGCAGCGTTGACAAGATAATTTCTGCTGCTGCACTAGTTGAAAAGGAAAGGTCTAGAAGACTTGGTACGTCTATTCTTAATCAAGTTGTTAGAGAAGCTATAGCATTCAAACCACCACCACGAACAAGAGGTGGTAAAAGAGGTCGTGTTTATTACACAACACAGGCTGCCATTCGTCCGCCAACGTTTGTTTTCTTTGTTAACGATGCAAAACTTTTCCCCGAGACATACCGTCGTTACATGGAAAAGAAGCTTCGCTCTGATGCTGGATTCCCAGGAACCCCTATTCGTTTATTGTGGCGTAGCAGGAAGAGACCAGATAAAAAAGGTAAATCTGCAGACAACAGCTTGCAGAGCTCAGTAATCCCAAGCAGAATGGCGTTAGCCACATGA</cdnaseq>

Protein Sequence

<aaseq>MAAMATTSTSSLLPLLPSRAPTPTPRRRLPFAAAAAAAPPRPFLVSSPPPPPAPRARLARRAAAGGLYGGGGGEEEGDGEDGEIEEEYYDDGDEEGDWEDDDAEEGEEMDVEAMEEEALGAVADLSERLSRELRIDDDVRDKRRIIRDKTSASKHIPDNLLPRVAIIGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGDREFMVIDTGGVITLSKSQAGVMEELAITTTVGMDGIPLASREAAIARMPSMIEKQAVAAVDEAAVILFIVDGQAVSYLTEWVSKIFQDGLVAADIEIADWLRRNYSDKRIILAVNKCESPRKGQMQALDFWSLGFSPLPISAITGTGTGELLDMVCSELSNFEELDGVEEDGNYIPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTTEDGQKYKLIDTAGIRRRAAVASAGSTTETLSVKRAFRAIRRSDVVALVVEAMACITEQDYKIAERIEKEGKACVIVVNKWDTIPNKNHQSTTYYEQDVREKLRILDWAPIVYCSATHGSSVDKIISAAALVEKERSRRLGTSILNQVVREAIAFKPPPRTRGGKRGRVYYTTQAAIRPPTFVFFVNDAKLFPETYRRYMEKKLRSDAGFPGTPIRLLWRSRKRPDKKGKSADNSLQSSVIPSRMALAT</aaseq>

Gene Sequence

<dnaseqindica>1..406#871..929#1040..1123#1234..1531#2220..2397#2880..2967#3403..3585#3775..3936#4038..4231#4548..4698#5149..5311#5854..5918#ATGGCGGCCATGGCCACCACCTCCACCTCGTCGCTGCTGCCTCTCCTCCCCTCCAGGGCCCCGACCCCGACCCCTCGCCGCCGCCTCCCGTTCGCCGCCGCCGCCGCAGCGGCGCCACCTCGCCCCTTCCTCGTCTCCTCCCCTCCGCCTCCGCCCGCGCCCCGCGCCCGCCTCGCCCGCCGCGCCGCAGCGGGGGGCCTGTACGGTGGTGGTGGTGGGGAGGAAGAGGGAGACGGGGAGGATGGGGAGATAGAGGAGGAGTATTATGATGATGGGGACGAGGAGGGGGATTGGGAGGATGATGATGCGGAGGAGGGGGAGGAGATGGACGTCGAGGCGATGGAGGAGGAGGCCCTCGGCGCCGTCGCCGACCTCTCCGAGCGGCTCAGCCGCGAGCTCCGCATCGGTGAGTGGGGGGTTTCAGCTTCGATTCGCTACCTCCGACATGGCCAGGAAAGTAGGAAACTAGTTAGTGCTTGTGAAGAGATAGTAGCATTTAGCCTAAAGTGCATAATCTAGTGTAGTAGAACAATCCTGTGTGGAATTTTGAGTCAATCCGTAGTTCCGTACTCTGGTCGTGGCGGGGATGTTCGTATAAGATCAGATGGATATGCTGCTTGTTGATGATGAACTGATTGTTGTGCCGAGAATCATGATGATGCAGATCAATTGATACTTTGCCTTGGAGCATGATGTATGAGTTTGGGAATTGCAGTTCCTTGTATTTCTATATTTGAAAGTTTAGTTGTTAGTGCCTAGCGTCGCAAAGTTTTTCAAGTACAGTATTTCTTCGGTTTTCTCCTTTAGAAGCCTGTTACATACTTACATTGACTTTGTTTAGTTCATGGGCTAAATGCGTTGTGTCTTCAGATGACGATGTTCGGGATAAAAGAAGAATCATCAGGGATAAGACATCAGCATCTAAACATGTAATTATATCTTCGTATTCTTGTAAATTGTAACCCTAGTTGACAGGCTGGTTAAGAAAGTGCAAATGTAAACAACTTCTATTTTCTTTACTATTGGGTCCGTGATTCAGATACCGGATAATCTTCTTCCAAGGGTGGCAATAATTGGAAGGCCCAATGTTGGTAAATCTGCATTATTCAATCGTCTTGTTGGGGTAAGCTATTTACAGCTACAAATATTACTTGAGCGAAGAGTCAGCATTGTGTGTAATTTTTAGCTGAATGCAGAGGCTGCTATGGTGTATTGAATTCTGGTGTCTCACAGGGCAACAGGGCTATTGTTGTTGATGAACCTGGTGTGACTAGAGATCGTTTGTATGGACGATCTTACTGGGGGGATCGAGAGTTTATGGTTATTGACACTGGGGGAGTGATTACTCTATCAAAATCTCAAGCAGGTGTGATGGAAGAGCTTGCTATTACAACTACTGTTGGTATGGATGGGATTCCTCTTGCCTCTAGAGAAGCTGCTATTGCTAGGATGCCATCAATGATTGAAAAGCAAGCAGTTGCTGCTGTTGACGAAGCAGCTGTGATACTATTCATCGTGGATGGTCAGGCAGGTTCAGACAATTACCCTTTTTTTAATTTGATCATTTCATTTTCTGGATTCTTCTGTTATATTTGGTAGTTCTGATTTTTAGCAACACTTTCTACTGCAATAGTTTTTTCAGGAATACACAAAAGTTTTGCGTATCATTGCCTTTCTACTGTAATATGAAGGAATCAATTTTAGCACCTGGTCCTGCCAAGTGATGGACTGTTGATTACATACTAAAATCCACCACATTTACAATTGCTCCAATAATGTCTTGTAGTATGGTTGTTTTTGTACATGTGGTAAACAAAGGCATCTAGAGAAAAATATTAGATATTCCTGTTAGCATGTTTCTTGTCTCATTCTCTTTGTGTGATTTCTGTCTGAATCTTCTATTGGGTATTGAAGCATTCCTTTTCCAACTTCTGCATGCTGATCTATTAAACTTTTTAAGCTTCTGGTTATTTTCTACCTGGAAGCAGACTTACGTATATGGATTCTTATTTAACCTAGCTCATACGTAGAAAGATTGAATGTGTGTTTATAGTTGCTAGATTTGATAAACCTCCTGGTGCTGAAATTTTTGTTTTGTCTAGTGCCTTTGTTGCTTCATGCCCCTGACTAAGTTCATTCTTACATGGATTTGCATTACTTGTAGCTGTAATTCCCTATTGTTGTTTTTCGGTACTGTTGATTGAATTAGTGTTATGTAGTGTCTTATCTAACGGAATGGGTATCAAAAATCTTTCAGGATGGCCTTGTGGCAGCTGATATAGAAATTGCTGATTGGTTACGTCGCAACTACTCTGACAAGCGCATTATACTTGCTGTAAACAAGTGCGAGTCTCCACGGAAAGGGCAAATGCAAGCTTTAGATTTTTGGTCATTAGGGTAAGTTCAACACGCAGTGACCCCTTGCTGTAATTACACAACACTCAGTTCATTTGCAATTAATAAATATTAAATGATGTTCTGTTGATTTTTCTTTTTTTACATTTTACGTACAGTTTGTATTAGGTCTGACATATTCTTGTGCTGATTAAATGTGAGAGGCCACAGACTTGATGATATTAGGTAAAAACGTTACTAAAGCCCATTGTTAGATGCGAAATATAAATAATGGACAACTAGTTTCTGAGCTTTTAGTGGTTCCACATGCAAGATCTCTAAACTCATTTCACTAGCATCGCTACAAGTTAAATGTGCTTTTAGTATACATAATCTGCATTCTGCAATGCTTTACTTGTGCTCTGACTCTGAAACAACCCAATGTGTTAACGATTACCTCATTTCTTTTATTGTTCACCACTCAACTTCATAAGAACAGAATGCCTATTGGCTGCTCAACTCATCGTTCTGTTGCTTCCTTCTAGATTTTCTCCTCTGCCAATATCTGCCATTACTGGCACTGGAACTGGAGAGCTCCTTGATATGGTGTGTTCAGAGCTAAGTAATTTTGAGGTACTGAACTTGCTTAGTTTGCCCAGAGGCCAGGGAATGTTTAATTGTGTATGTCTATATGCATGCTTGATACCCTTTTCTGTTTATGGTTGGTAATGGAATCATTATTATAATTTTTTGTTGCAACACTAAAATGTTACTCTTGGCTGCGGAAACAACTCAAGTATTGCTTCTGACAAATGGATATGCTAACTTAGTGGAATATTTCACTCTCTTTCCTCCAGTCCTACAAACCTAGATGAATACTGCTAGAAACACGTGGTGTGGTGACACCTTGTTATATCCAGCCTACCCATTGAGCTTCTAGATCCAGAACCTTGAATCATAAGTTGTGGTGTTTGTCTTTTCAGTAGTTCTTTAAAATAGCCTTCTCCTTTCCAATTTTGATTCATATATGGAAATATTTTGTCCATTACCTCACAAAATGTTTTACAGGAACTGGATGGAGTTGAAGAAGATGGAAACTATATTCCTGCTATTGCCATTGTCGGAAGACCTAATGTCGGGAAAAGTAGTATTCTCAATGCTTTAGTTGGAGAAGATAGAACTATTGTGAGCCCTGTTAGTGGGACAACCCGTGATGCCATAGATACCGAGTTCACCACAGAAGATGGGCAGGTTTGTTCAGAATGCTTATGAAAGTTTAAGTGACCAAGAGCAGCATCATTATTTCATTATTGACCCTAGCTATGTCCACTTTTCATGTATCTTTCATCTTTGTAGCAAAACACAATTTGAATTGGAAGAAAGAAATTTACATCTCATAGGAAAGTAATTCTAATTTGCTGATATTGCAATATGCTGCAGAAGTACAAACTCATTGACACCGCTGGCATCCGACGAAGGGCAGCAGTTGCTTCTGCTGGCAGCACAACGGAAACACTTTCAGTAAAACGTGCATTTCGTGCAATCCGCCGGTCTGATGTGGTTGCCCTTGTTGTTGAAGCAATGGCCTGCATTACGGAGCAGGTATCTCTACCCCATCACATGCACATGTGCACCCCCAAACAATTCAAAGAGATGTTGTCTTACCAATCTTTTCTAACATGGTGAATTTCTGTGGTACCAAGGACTATAAAATAGCAGAAAGAATTGAGAAAGAAGGAAAAGCATGTGTAATTGTTGTGAACAAATGGGACACAATCCCAAACAAGAACCATCAGAGTACAACATATTATGAGCAAGATGTAAGAGAGAAGCTTCGCATACTCGACTGGGCTCCTATTGTTTATTGTTCTGCAACACATGGCAGCAGCGTTGACAAGTTAATCCCTTAACTTTATTTTTTACTCCGCAATAAGCATTTGGTACTTCACTACTATAGCATTTGATGGTTTAACCTAGGCTATTTGTAGCTTGTCGGTGTTATTGTCTATTTTCCTGCATACCAGACCTGAAATTTAAGCTGATGTCATTAAGGCATTAACTAATGTTTCATGCTGAATCTTCATGTTCCTCTGTTATCTCCCAATTTCTTGTAATCCAACTAATTGCATTGCATGTAGGAGATTGTTAACTTCACTAGATATGTTTTTCTGTATTGGCATTGTAATTATTCTTTATACACAAATATTCCTCAGGATAATTTCTGCTGCTGCACTAGTTGAAAAGGAAAGGTCTAGAAGACTTGGTACGTCTATTCTTAATCAAGTTGTTAGAGAAGCTATAGCATTCAAACCACCACCACGAACAAGAGGTGGTAAAAGAGGTCGTGTTTATTACACAACACAGGTAGCTTCTAACTTCTTATTGAACCATTCTGTTTATTCCTCTTAAGCCAACAAGTTTATGGTCTCATCTTTCAAGTAAGTCGTAAAGGTCACTAGCGTTCTCTTGATCTCTACTACAACTAAATTTTCACTTCCTTGTATGTCAAGTGAAGTCCTTAAATCAAATACAGCTCCTTAATTCATTTTTAAGTATCTGAAGATATATGATTGATTGAAACTGGATCCCTTAAAGAAGTATTTCAAAGTCAGCAAAGGATCCACTGGTTACCCACTTCAAAGTATATTTGATACACTCACTGTCCTAAGATAGAGTAGTAATATGCATTCTGCAATATTATCAGGGCCCTTTGAAATCCGTACTGCTTTTAGATTTGTAAAGTTCACCTTGGGGAAATGTTTTCATGCTTTCCTTTTATTTTCGCACCAAAGGAAGCTTATTCTTAACCTGCAGGCTGCCATTCGTCCGCCAACGTTTGTTTTCTTTGTTAACGATGCAAAACTTTTCCCCGAGACATACCGTCGTTACATGGAAAAGAAGCTTCGCTCTGATGCTGGATTCCCAGGAACCCCTATTCGTTTATTGTGGCGTAGCAGGAAGAGACCAGATAAAAAAGGTGAGTCGATATCAAAGTGCCCACTTGCATAATCTCAATGATTTTAACTGAATAATTTTTCTACTATCATACCTGCATGCATAGAATTAGAAAAGATTATTTTGTGATTGAATCATTGAAACAGACAGAACAACAATGCTAGATAAGTGAAAAAACACAGAAGGAACAAATATTGTGCTATCAGCAAGAGAGATTTTTGCAGTCCCATTATATTTGATTTCACCAATTTCTATGATATATGTAGGTGTACCGTGCACATGATAGGTTAAGGACCTTGGTCCTTGTATTAGAACAAATATAATGCTAATATCTGCTGAGGCTTGTAGCATCAAGGTAGTTGACCAAAGTAATAAGAATACAAAATATCATGTGATGATAGAACATATAGAAAAACTATTTAATTGATCTGGGTATATCCAACACCGCTATGAATTTCATATTAGGAGTAATGTTTTGTGCTCTACCATACCTGCTGTTATAAGTCATATGATGATGAGGTTAAATAGAATTGTCATACTAATTACTCCATCTGTTCTTGGCAGGTAAATCTGCAGACAACAGCTTGCAGAGCTCAGTAATCCCAAGCAGAATGGCGTTAGCCACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035600