BGIOSGA035646

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Revision as of 09:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035646| Description = Rangap1 interacting protein| Definition = Oryza sativa Indica Group BGIOSGA035646, complete gene.| tag = OS11G0657000...")
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Gene Name

BGIOSGA035646

Description

Rangap1 interacting protein

Definition

Oryza sativa Indica Group BGIOSGA035646, complete gene.

LocusTag

OS11G0657000

Ensembl Transcript ID

BGIOSGA035646-TA

Ensembl Protein ID

BGIOSGA035646-PA

Length

4809

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21164578..21169386

Sequence Coding Region

21164578..21164624,21165209..21165284,21165401..21165559,21165687..21165764,21165860..21165964
,21166153..21166219,21166330..21166391,21166482..21166621,21166828..21166954
,21167028..21167142,21167331..21167419,21167810..21167893,21168072..21168839
,21168913..21168972,21169306..21169386

Genome Context

<gbrowseImage1> name=IndicaChromosome11:21164578..21169386 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:21164578..21169386 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGAAGATGTTTGGTTTCTCTCGTCGACGGATGAAGCTTGGAAGGTTGAAGGGTCATTTGCATGATCCTTTTCATGGCTCCCGGAGTCCTGCTCGGACAAAGCGGTCCAGTCACCCCAATGGAGAAGACCAAGTGACCACATCAGTGAGCGGCCGAGCTGACGACCTTGCTTGGCGCTGCTCATCTGATACTTTTGATCTCAATGGCCGCGCATTTGAGAACTCCGAGAATTGGGCAGTGTTGTCAACAGAAGGGGACAAGCCGATTCCTCGTTTTGATCATGCAGCAGCCATGGTAGGAAGCAAAATGGTGGTCTTTGGTGGAGATTCTGGCCATCATTTGCTGGATGATACAAAGATATTGAGCTTAGACAAGCTTACATGGGATTCGATGGCTCCCAAAATCCGTGTATCACAAGGTGGACATGCTCCAAAGTTTCGACCATGCAAAGGCCATAGCCTGGTTCCATGGGGGAAGAATGTCATTCTTGTTGGAGGGAAAACTGATCCACCTTCTGACCGGATATCAGTCTGGTCCTTCAATACTGAAACTGATCTCTGGTCGTATATAGAAGTCAAGGGTGATATCCCGGTGGCTCGAAGTGGCCATGCAGTGATTAGAGCAGGTCCTGTTTTAATTCTCTTTGGAGGTGAGGATGGAAAAGGGAAGAAACTACATGACCTTCATATGTTTGACCTGAAATCTTCAACATGGCTTCCTTTGAATTATAAAGGTGCTGGACCTTCTCCAAGATCCAATCATGTGGCTGCTCTGTATGATGATAGAATTCTATTGATCTTTGGAGGCCAATCAAAATCCAAAACACTCAATGATGTTCATGCTCTAGACTTCGAAACGATGGTATGGTCGAGAGTGAAAACCCATGGCCATCATCCATCACCTCGAGCTGGTTGCTGCGGAGCTCTCTGTGGCACTAAATGGTATATCGCAGGGGGTGGAAGCAAGAAAAAGCGTCATCCGGAAACTTGGGTTTTTGACGTTCTGGAATCCAAGTGGTCTGTTTGTGTAGTACCTCCTAGTTCCTCAATTACCACAAAGAAAGGATTCAGCATGGTTCCGTTGTACTACAGGGACAAGATTGTTCTTGTTGCTTTCGGAGGAAACAAAAAGGAACCATCTGATAAGGTCGAAGTACTAGTGGTACTGCAAAACGAGCACTGCTTCAGCTGGCGGTCTGCCCCTGATGTAGAACCTTTACTGTATGAGGACTCACCTCCAAGCTCAAAGGAACTTTCTGATCACCTGAACAACAATTGTGCTCCTCTGTACTCTACTGGATCTGTAGCAAGGCATAGCCTTGCCACCACTGTGGAGAGCTCGTCTGGGCGGAAATCGCTCCCTGATTCGCTGCTACAGCAACCTAATCTTGGCAGTTCATCACTCCGCAGACAGTTCCGTCAGGAGGAGGAATGCAGCCTAGCCCACAAACTGCAGAAACCAATTGATGATGACAGATACAAGGATGTTGATGACTGTTCCGAGCTACCCTCGGTCACAAATCAAAAGCAGCGCAATGATATATATCAGTCTCCAGATGCTGATGCTAAAGCGAAGAGGGTGGGCAGAAGTTCATCGGACATTAACCATCAGTATGACACCAAAATAGCAAACCTGATCAGGAGGAACATGGCATTGGAAGAGCAACTTTCAGCGGCAATGGCTAGCAAAGATGAAGCGGAGAAGAACCTCTCTTTGGTCATCGACAGCAAGGAGGAGCTAGAGAAGAGGTTGTCTGAGAAGGACAGGGAGGTCGAGACGCTGAAGGAGAAGGTGACAGGATTAGAGCTGGCGCAAGAAGAATCAAACAGCCTCTCAAACACCGTCCATGCTGACAATGTGCGCCTCGAACGCGAGGTGGCGTTCTTGAAGGCTGTCATGGATGAAACCCAGAAGGAGCTTCACTCTACTCGCGGAGTTTTAGCAGGAGAACGCGCGAGGGCCTTCCAGCTCCAGGTTGAAGTGTTCCATCTGAAGCAAAGGCTGCAAACAATGGAAGGAAGATCCCCAACACCAAGGAAACCTCAGAATCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MPKMFGFSRRRMKLGRLKGHLHDPFHGSRSPARTKRSSHPNGEDQVTTSVSGRADDLAWRCSSDTFDLNGRAFENSENWAVLSTEGDKPIPRFDHAAAMVGSKMVVFGGDSGHHLLDDTKILSLDKLTWDSMAPKIRVSQGGHAPKFRPCKGHSLVPWGKNVILVGGKTDPPSDRISVWSFNTETDLWSYIEVKGDIPVARSGHAVIRAGPVLILFGGEDGKGKKLHDLHMFDLKSSTWLPLNYKGAGPSPRSNHVAALYDDRILLIFGGQSKSKTLNDVHALDFETMVWSRVKTHGHHPSPRAGCCGALCGTKWYIAGGGSKKKRHPETWVFDVLESKWSVCVVPPSSSITTKKGFSMVPLYYRDKIVLVAFGGNKKEPSDKVEVLVVLQNEHCFSWRSAPDVEPLLYEDSPPSSKELSDHLNNNCAPLYSTGSVARHSLATTVESSSGRKSLPDSLLQQPNLGSSSLRRQFRQEEECSLAHKLQKPIDDDRYKDVDDCSELPSVTNQKQRNDIYQSPDADAKAKRVGRSSSDINHQYDTKIANLIRRNMALEEQLSAAMASKDEAEKNLSLVIDSKEELEKRLSEKDREVETLKEKVTGLELAQEESNSLSNTVHADNVRLEREVAFLKAVMDETQKELHSTRGVLAGERARAFQLQVEVFHLKQRLQTMEGRSPTPRKPQNL</aaseq>

Gene Sequence

<dnaseqindica>1..47#632..707#824..982#1110..1187#1283..1387#1576..1642#1753..1814#1905..2044#2251..2377#2451..2565#2754..2842#3233..3316#3495..4262#4336..4395#4729..4809#ATGCCGAAGATGTTTGGTTTCTCTCGTCGACGGATGAAGCTTGGAAGGTGAAACCTACTTCTTTCCTTCGATTTGGCCCAGAAATTTGGTCCCTTTTTTTTATCTGCTCATATCCATTTGTGTTCTTCCTAAACCTGGCTAGGTATTGGTTTCTTTGGTTATTGTTCATAGTTTTTTTTTTTCCTTTTCGATAATGGTTTTTGTTCATGGGACATGGGTACAGAGCCATATCCTGCATTTGAGGAGATGGCTCAGTTAGTTTTCATGATTCGATCTATAAATTTGACCATTTAGATGATTTAATTCGTTATGTACGAAAGGGATTGAGCTTGTTATCTTAACAGAAGAGAGAGAGAGAGAATTTTTTTTGGGTAAGTTTTCGTTGGTAGATATGAGATTGAAATGTCTGGATTGAGAAAACTCGGTCTTTTTCCTTTTGCGGAGTTGAAAAATACGTGGTTTTAAAACTGGCGAACTCCCCTGCAAATATCTGAGAGATTTTGGTAAACCTAGCCTTACTCTGCATTTCTGCAGTGTTACATTTTGCTACTGTAGATAATAAGTCAGTTTTTCCTAGTTATTCATCCTTCTGTTTCAATCACCTGTAAAAATGTTTTTATGATTTCTACAGGTTGAAGGGTCATTTGCATGATCCTTTTCATGGCTCCCGGAGTCCTGCTCGGACAAAGCGGTCCAGTCACCCCAATGTAAGCTTTTATGGCCTGAAAGAAATGTACATTTTGCCTTGTTTCTGGTTCAGTTGTATTTTGAATTTTTGATGCAGTAGTATTTAAATGGTTATTAGTTTTCACGCTTTGTCCAGGGAGAAGACCAAGTGACCACATCAGTGAGCGGCCGAGCTGACGACCTTGCTTGGCGCTGCTCATCTGATACTTTTGATCTCAATGGCCGCGCATTTGAGAACTCCGAGAATTGGGCAGTGTTGTCAACAGAAGGGGACAAGCCGATTCCTCGTTTTGATGTAAACAACTTTCTTAAAACTCTGATTTGTGCATCAGGAGAAAAACAAATACAGTGATGTTCTTATCAATAATCAGTTTCTATTCTGAATCCTTTGTATCGCTTTCGTCTGATTTTCGTTTAAACAGCATGCAGCAGCCATGGTAGGAAGCAAAATGGTGGTCTTTGGTGGAGATTCTGGCCATCATTTGCTGGATGATACAAAGGTAATCAGTTTTATGTTTCTTAAGGTTCTCATCTGTTAATGTTGCATGGCAATTTTGGGAGAAGTTCATGATCTGGTATTTTATATATCCTTCAGATATTGAGCTTAGACAAGCTTACATGGGATTCGATGGCTCCCAAAATCCGTGTATCACAAGGTGGACATGCTCCAAAGTTTCGACCATGCAAAGGCCATAGCCTGGTATAATTCTTGAAGCTCATTGTTCTCTCACTAGTCACTACTCATGTCCTTGCATTGATTTATAATCAGGATTATCAGTTGATGTATGACCTATTGTTCTGATTTTACTGGAATTGAATTCTCATAGCCTCCTTGTCAAAGTAGTAGATGTAACTACGACACAAAGTACTTGCTTTTTGAAATTTTAGGTTCCATGGGGGAAGAATGTCATTCTTGTTGGAGGGAAAACTGATCCACCTTCTGACCGGATATCAGGTTAGACAGCACTGTTAGATTCTCAAAAGAATGTGAATTTTCTTTTGGTCAGATGCTTTACTTTCCAATTTGCAGTAGAAATATTCGTAACTTCATTTCTTTTATTGCAGTCTGGTCCTTCAATACTGAAACTGATCTCTGGTCGTATATAGAAGTCAAGGGTGATATCCCGGTAAGGTGGTGCTTATTTCAGGATTGATATATACACTGCCTAATTTTCATGCAAAATGATAAGAAATTGTCCCCTGATTACTTATGTCAGGTGGCTCGAAGTGGCCATGCAGTGATTAGAGCAGGTCCTGTTTTAATTCTCTTTGGAGGTGAGGATGGAAAAGGGAAGAAACTACATGACCTTCATATGTTTGACCTGAAATCTTCAACATGGCTTCCTTTGAATTATAAGTGAGTCATCCTTGTCTAGAAGTAGAACTCAGAAATATGAATATCAATAGAGACTAAAGAAAGTTTTTTCAGTTGATCATTAGGCTTATTATCTGAAAATCAACTCAATGCAGCAGTTCCTGCACTGTGGCACTGAATTTCCTCAATGTTCGAATTATTCTTGTGCTTATCATTTTCTCTTATTGATTATAAGTCCACTGTTCTAGAGGTGCTGGACCTTCTCCAAGATCCAATCATGTGGCTGCTCTGTATGATGATAGAATTCTATTGATCTTTGGAGGCCAATCAAAATCCAAAACACTCAATGATGTTCATGCTCTAGACTTCGAAACGGTAATTTCTATCGGGTTTCCTTGTAGGTTTTTCTTGTTGATGCGCTTACTGAAAAAACCATTCTTCTTGTTAGATGGTATGGTCGAGAGTGAAAACCCATGGCCATCATCCATCACCTCGAGCTGGTTGCTGCGGAGCTCTCTGTGGCACTAAATGGTATATCGCAGGGGGTGGAAGCAAGAAAAAGCGTAAGTTTAAACATTATGTACTAATTCATGTACTAGTCTATAATATGACAGATGAATGGTTCAGTCAGTCCTAAAAAAAAGATGGCTCAGTTCTGTTTCTGACCCAGAAGTATGCATTTGCTGAAAGATCGCATCTTTTGCGACTGTGGCCCATGGGTCATTTTAATGAGAAGTTTTCTTTCTCTCAGGTCATCCGGAAACTTGGGTTTTTGACGTTCTGGAATCCAAGTGGTCTGTTTGTGTAGTACCTCCTAGTTCCTCAATTACCACAAAGAAAGTAAGTTAAAAATTCATTCATGACTTAGTTCCATGTAAGTGATCCGTGACTCCACGAGTAGTACCGATCTTACAGTAAGACTGCAAGGTGGATATTGTGTACTTAAGGAACAGCTGTCCTGAGAATTTAGATAAATGAATACTAGGTTCCTTGAAATTTATGATGGCTATTGTCTAGAGTTGAAGGCAGAAGTCACTAGGTAAACAAAGATAACGTAGTTCTTTCCCATTTAATTTATACTGAAAATAATGAAAAAGAAGACTGTCTTTAGCTTCTCTGGTGATTATGGAGCAGAAATAAGAGAAATCAAGTCATATTCAACTTCATGTTTATTTCTGTGTTATCATTTTTGCTCTGTTGCTGAATGATTGATGATGCAACTCATGGCAGGGATTCAGCATGGTTCCGTTGTACTACAGGGACAAGATTGTTCTTGTTGCTTTCGGAGGAAACAAAAAGGAACCATCTGATAAGGTGAAAGAGCTGAACTTCCCAACCAATATAACAACAATTCTTTGTGTCTGGACTTCATTTTCTGATATTTTCTGAAACGATAATTCTCTTCTTATTCATATTTTGCGGAGGTGCATTTGAAACATTAATATAACCAGGTTCACCAGTCCTTAACCAAATTTGTTTTGCACTTTTGAAGGTCGAAGTACTAGTGGTACTGCAAAACGAGCACTGCTTCAGCTGGCGGTCTGCCCCTGATGTAGAACCTTTACTGTATGAGGACTCACCTCCAAGCTCAAAGGAACTTTCTGATCACCTGAACAACAATTGTGCTCCTCTGTACTCTACTGGATCTGTAGCAAGGCATAGCCTTGCCACCACTGTGGAGAGCTCGTCTGGGCGGAAATCGCTCCCTGATTCGCTGCTACAGCAACCTAATCTTGGCAGTTCATCACTCCGCAGACAGTTCCGTCAGGAGGAGGAATGCAGCCTAGCCCACAAACTGCAGAAACCAATTGATGATGACAGATACAAGGATGTTGATGACTGTTCCGAGCTACCCTCGGTCACAAATCAAAAGCAGCGCAATGATATATATCAGTCTCCAGATGCTGATGCTAAAGCGAAGAGGGTGGGCAGAAGTTCATCGGACATTAACCATCAGTATGACACCAAAATAGCAAACCTGATCAGGAGGAACATGGCATTGGAAGAGCAACTTTCAGCGGCAATGGCTAGCAAAGATGAAGCGGAGAAGAACCTCTCTTTGGTCATCGACAGCAAGGAGGAGCTAGAGAAGAGGTTGTCTGAGAAGGACAGGGAGGTCGAGACGCTGAAGGAGAAGGTGACAGGATTAGAGCTGGCGCAAGAAGAATCAAACAGCCTCTCAAACACCGTCCATGCTGACAATGTGCGCCTCGAACGCGAGGTGGCGTTCTTGAAGGCTGTCATGGATGAAACCCAGAAGGCAGGATAGATAACCTTCCTATCATCTCTTCATCAGCCACTTTTGGCACTGACTGAGTTCTGTTCATTCACAGGAGCTTCACTCTACTCGCGGAGTTTTAGCAGGAGAACGCGCGAGGGCCTTCCAGCTCCAGGTAAATGGTGAAAGTGTTCAATCTTTCAGGTTCTTTTTTTTTTCTGGTTAATACAAGATTGACAGCATGAGTTACCCCATCTCTCATGGCCTGTCAATAACTCAATATATGTGCTCTGTTGCCCTGTTTGATTTAGATTATTGAACAGATTATTGCCATGAATTATTGATTTGATTATAGAGATAAATTAAATAAATAGCATAAAATATGCAGTAGAAGAAAGTTTTTTGAGAAAACATATTTTCCGAAGCTGGAGCAAATAATCAATTTCAATAATTTGTGTTGCATCTGTGACTGTCCATGTAACTGACTTTGTTGATATTGCTTTGCCAGGTTGAAGTGTTCCATCTGAAGCAAAGGCTGCAAACAATGGAAGGAAGATCCCCAACACCAAGGAAACCTCAGAATCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035646