BGIOSGA035671

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Revision as of 09:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035671| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035671, complete gene.| tag = OsI_369...")
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Gene Name

BGIOSGA035671

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035671, complete gene.

LocusTag

OsI_36944

Ensembl Transcript ID

BGIOSGA035671-TA

Ensembl Protein ID

BGIOSGA035671-PA

Length

4850

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21713844..21718693

Sequence Coding Region

21713844..21716124,21716565..21717619,21718052..21718693

Genome Context

<gbrowseImage1> name=IndicaChromosome11:21713844..21718693 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:21713844..21718693 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGTGGGAGAGCGCTGGTGGTCAGAGGAACAGCCAACAACTTGGTGGTGGTGTCTTTGGAGGAGATGCCCACCACCTGTTCGATGAAATGTCGAGCTGTCCAAGAGCTGACTCAGCTGCTGTCCTTCGCGTCACTGTGAGCCAGATCATATATCCAGTGACATCTGAGGTGTTGCATCAAGTGTACGATACCTATGGAGCAGTGGCGGTGCAGGTTCTTGCGGTGAGCACATGGCAAGTCAAGGCTCTTGTGTCGTTCATGTCCAGCCATGACGTGGAGAGGGCTCGGTCTGCCACCCACGGTCGCGACATCTACGACGGGGGTTGCTTACTGGATGTGCAGCACGTCCAGATGTTCCCTGGAGATGGCGCCACCGCCACGCACACCACCTGTTCGACGATGGTACCAAGTAGCGCCACCGCAAGGCCAGTGGCCAAGAGTACTGCTGCTGCACCAGAACGTGTGTTCCCTGCTACTACAGCTTCATCTGTACCCTCAATTACATCAGCAGCCATAGTGACATCGGTTCCTTTCAACGAGACCAAGAAGGCTGAGACTGACATGGACAAGGCGGTGGAGAACTTAGACAAGACCATTCAAGACCTGTGCACCAAGATCGATCGGATGCTAGAGGCATTTCGCGACACCAAGGTCAGTACAGAGGCCGGCTCAACTAACCTTGTTGACATAGCCAAGGTTGGCATGGGAACAACCATCGAGTGTTCAATGAAGTGTGAGAACCAGTTGGCTGATGATGATGATGGCAAAGACATGGCCAAGGAGGAGTGGATGGAGCTCATGGAAGTGGATACCATGTTCACCGCTATGTATTTATGCTTCAGAGATCCATTTTTAATCATCAATGCAATTCCTCCCAGGAACTGGAGTTGGTGCTTGAGCCGTGACTACTTTGGAGTTGTAGGCCTCTCTTTCGTTTCATCGAAATTGGAAGTACTCTATGGTTGCTTTGACCGGAGCTCAGAATACACAGCTAGCCCTCCACCAGTACCACCTTGGAGAGCAACAATTCCATGGAACAAAGCTGAGATGACCTCAGGTTCTCGGCCTTTACCATGGCCTGATCCACAGCTTTGTCAAGGCAGCGGAGGCGTGGTGGTAAAGCTCTTACAACTCTGGCCGCCACCTATTCAAACAAATGTTAAAGCTGAAATTGAAACACTGAATTTATATGGTGAGTCTCATCAAGTCTCCTTGAACTATAGTGTTGCCCAGTTCATGAGTAGAACAATTAATTCCACTGAGGGCTTGCTGCAAAATCTGATGGTTGGATGGTGTATTTGGCATGAGATATGTCTCTCTGGTGCCTTTAGGAAGGCCTATCAGCACACACATCATTCAACCTATGGTTGGGCATATGGGGATCATGAATTGTTCTTGCTGCTGATGCTGATTTCCCAGTTGTCACCTGATGCATGGTGTGATTGCTTATTCCGTTGTGATAATGCTGATGGTATTTGTACTTGCAAGTCACCCGAGAGAAGTACCAACTGCCATGCTCGGTGCTGCAGTGTTCCAACTCCATTTCAGGTTCAGAGCAAAAACAATGGCGTAATAGGTGATACTTCATGGACTCAATTCAGATCAAACAATGGTGATGCTGTGCTGTTGGTGCCACAACCATGGCCACAGCCGATTCTCTTCCCAGTTCATATTATGGTTGAGCTAGAGGTTTCGTTGAAGGGAATTATTGTCTCAACAAAAATGTTGGTCAACTTGCAATCTTTGGCTCCTCCTTCGCTTTGGAGAAATGAGGTATTCAATTTGTGTGCAACAGGAGGGCAAGGGCTAAATTTTTCCTGGAAATGTATATATGAAGAGCTACAGCAGTTGCAATGTACCTTTGAGTTTACTCTTTGGAATCAACATGGACAGACATATAAGCTATTGTTACAAAAGGAGCAGCTGAAACTTGGTGCAGTCTATCTCAGTTTGGAAGTAAAATCTTCAGAGACATGCTTCACTTGCCGGACTTACGAGGAGGACATGTTCTTACAAATCACAAATTTTGTAGGTCACAACTATGAGGGGAGTAACACTTGTTCTACCCATCAATTCAGTCATGGTTGGCCTGAATATTTGGTAAGAGCTAAATTCGTTCAATTCCAAATAGGCAAGATTCTTCAGGAGCAAGTGCAACTGGCATTGTATACAACATCACTGGTGCGGGTGACTTGGGATCCTGGTGGCTGTGTTGTATCGGCTTGGGGACAAGCCGAAATTCATGGAGGGAGGAATGTCATGGGCCTGGGCCTGTCAAGAGATGCCCACCACCTGTTCGATGAAATGTCGAGCTGTCCAAGAGCTGACTCAGCTGCTGTCCTTCGCGTCACTGTGAGCCAGATCATATATCCAGTGACATCTGAGGTGTTGCATCAAGTGTACGATACCTATGGAGCAGTGGCGGTGCAGGTTCTTGCGGTGAGCACATGGCAAGTCAAGGCTCTTGTGTCGTTCATGTCCAGCCATGACGCGGAGAGGGCTCGGTCTGCCACCCACGGTCGCGACATCTACGACGGGGGTTGCTTACTGGATGTGCAGCACGTCCAGATGTTCCCTGGAGATGGCGCCACCACCACGCACACCACCTGTTCGACGATGGTACCAAGTAGCGCCACCGCAAGGCCAGTGGCCAAGAGTACTGCTGCTGCACCAGAACGCGTGTTCCCTGCTACTACAGCTTCATCTGTACCCTCAATTACATCAGCAGCCATGGTGACATCGGTTCCTTTCAACGAGACCAAGAAGGCTGAGACTGACATGGACAAGGTGGTGGAGAACTTAGACAAGACCATTCAAGACCTGTGCACCAAGATCGATCGGATGCTAGAGGCATTTCGCGACACCAAGGTCAGTACAGAGGCCGGCTCAACTAACCTTGTTGAAACAGCCAAGCTTGGCATGGGAACAACCATCGAGTGTTCAATGAAGTGTGAGAACCAGTTGGCTGATGATGATGATGGCAAAGACATGGCCAAGGAGGAGTGGATGGAGCTCATGGAAGTGGATACCATGTTCACCGCTATGTATTTATGCTTCAGAGATCCATTTTTAATCATCAATGCAATTCCTCCCAGGAACTGGAGTTGGTGCTTGAGCCGTGACTACTTTGGAGTTGTAGGCCTCTCTTTTGTTTCATCGAAATTGGAAGTACTCTATGGTTGCTTTGACTGGAGCTTAGAATACACAGCTAGCCCTCCACCGGTACCACCTTGGAGAGCAACAATTCCATGGAACAAAGCTGAGATGACCTCAGGTTCTCGGCCTTTACCATGGCCTGATCCACAGCTTTGTCAAGGCAGCGGAGGCGTGGTGGTTCAGAGCAAAAACAATGGCGTAATAGGTGATACTTCATGGACTCAATTCAGATCAAACAATGGTGATGCTGTGCTGTTGGTGCCACAACCATGGCCACAGCCGATTCTCTTCCCAGTTCATATTATGGTTGAGCTAGAGGTTTCGTTGAAGGGAATTATTGTCTCAACAAAAAAGTTGGTCAACTTGCAATCTTTGGCTCCTCCTTCGCTTTGGAGAAATGAGGTATTCAATTTGTGTGCAACAGGAGGGCAAGGGCTAAATTTTTCCTGGAAATGTATATATGAAGAGCTACAGCAGTTGCAATGTACCTTTGAGTTTACTCTTTGGAATCAAGATGGACAGACATATAAGCTATTGTTACAAAAGGAGCAGCTGAAACTTGGTGCAGTCTATCTCAGTTTGGAAGTAAAATCTTCAGAGACATGCTTCACTTGCCGGACTTACGAGGAGGACATGTTCTTACAAATCACAAATTTTGTAGGTCACAACTATGAGGGGAGTAACACTTGTTCTACCCATCAATTCAGTCATGGTTGGCCTGAATATTTGGTAAGAGCTAAATTCGTTCAATTCCAAAGAGGCAAGATTCTTCAGGAGCAAGTGCAACTGGCATTGTATACAACATCACTGGACGGGTGA</cdnaseq>

Protein Sequence

<aaseq>MKWESAGGQRNSQQLGGGVFGGDAHHLFDEMSSCPRADSAAVLRVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDVERARSATHGRDIYDGGCLLDVQHVQMFPGDGATATHTTCSTMVPSSATARPVAKSTAAAPERVFPATTASSVPSITSAAIVTSVPFNETKKAETDMDKAVENLDKTIQDLCTKIDRMLEAFRDTKVSTEAGSTNLVDIAKVGMGTTIECSMKCENQLADDDDGKDMAKEEWMELMEVDTMFTAMYLCFRDPFLIINAIPPRNWSWCLSRDYFGVVGLSFVSSKLEVLYGCFDRSSEYTASPPPVPPWRATIPWNKAEMTSGSRPLPWPDPQLCQGSGGVVVKLLQLWPPPIQTNVKAEIETLNLYGESHQVSLNYSVAQFMSRTINSTEGLLQNLMVGWCIWHEICLSGAFRKAYQHTHHSTYGWAYGDHELFLLLMLISQLSPDAWCDCLFRCDNADGICTCKSPERSTNCHARCCSVPTPFQVQSKNNGVIGDTSWTQFRSNNGDAVLLVPQPWPQPILFPVHIMVELEVSLKGIIVSTKMLVNLQSLAPPSLWRNEVFNLCATGGQGLNFSWKCIYEELQQLQCTFEFTLWNQHGQTYKLLLQKEQLKLGAVYLSLEVKSSETCFTCRTYEEDMFLQITNFVGHNYEGSNTCSTHQFSHGWPEYLVRAKFVQFQIGKILQEQVQLALYTTSLVRVTWDPGGCVVSAWGQAEIHGGRNVMGLGLSRDAHHLFDEMSSCPRADSAAVLRVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATHGRDIYDGGCLLDVQHVQMFPGDGATTTHTTCSTMVPSSATARPVAKSTAAAPERVFPATTASSVPSITSAAMVTSVPFNETKKAETDMDKVVENLDKTIQDLCTKIDRMLEAFRDTKVSTEAGSTNLVETAKLGMGTTIECSMKCENQLADDDDGKDMAKEEWMELMEVDTMFTAMYLCFRDPFLIINAIPPRNWSWCLSRDYFGVVGLSFVSSKLEVLYGCFDWSLEYTASPPPVPPWRATIPWNKAEMTSGSRPLPWPDPQLCQGSGGVVVQSKNNGVIGDTSWTQFRSNNGDAVLLVPQPWPQPILFPVHIMVELEVSLKGIIVSTKKLVNLQSLAPPSLWRNEVFNLCATGGQGLNFSWKCIYEELQQLQCTFEFTLWNQDGQTYKLLLQKEQLKLGAVYLSLEVKSSETCFTCRTYEEDMFLQITNFVGHNYEGSNTCSTHQFSHGWPEYLVRAKFVQFQRGKILQEQVQLALYTTSLDG</aaseq>

Gene Sequence

<dnaseqindica>1..2281#2722..3776#4209..4850#ATGAAGTGGGAGAGCGCTGGTGGTCAGAGGAACAGCCAACAACTTGGTGGTGGTGTCTTTGGAGGAGATGCCCACCACCTGTTCGATGAAATGTCGAGCTGTCCAAGAGCTGACTCAGCTGCTGTCCTTCGCGTCACTGTGAGCCAGATCATATATCCAGTGACATCTGAGGTGTTGCATCAAGTGTACGATACCTATGGAGCAGTGGCGGTGCAGGTTCTTGCGGTGAGCACATGGCAAGTCAAGGCTCTTGTGTCGTTCATGTCCAGCCATGACGTGGAGAGGGCTCGGTCTGCCACCCACGGTCGCGACATCTACGACGGGGGTTGCTTACTGGATGTGCAGCACGTCCAGATGTTCCCTGGAGATGGCGCCACCGCCACGCACACCACCTGTTCGACGATGGTACCAAGTAGCGCCACCGCAAGGCCAGTGGCCAAGAGTACTGCTGCTGCACCAGAACGTGTGTTCCCTGCTACTACAGCTTCATCTGTACCCTCAATTACATCAGCAGCCATAGTGACATCGGTTCCTTTCAACGAGACCAAGAAGGCTGAGACTGACATGGACAAGGCGGTGGAGAACTTAGACAAGACCATTCAAGACCTGTGCACCAAGATCGATCGGATGCTAGAGGCATTTCGCGACACCAAGGTCAGTACAGAGGCCGGCTCAACTAACCTTGTTGACATAGCCAAGGTTGGCATGGGAACAACCATCGAGTGTTCAATGAAGTGTGAGAACCAGTTGGCTGATGATGATGATGGCAAAGACATGGCCAAGGAGGAGTGGATGGAGCTCATGGAAGTGGATACCATGTTCACCGCTATGTATTTATGCTTCAGAGATCCATTTTTAATCATCAATGCAATTCCTCCCAGGAACTGGAGTTGGTGCTTGAGCCGTGACTACTTTGGAGTTGTAGGCCTCTCTTTCGTTTCATCGAAATTGGAAGTACTCTATGGTTGCTTTGACCGGAGCTCAGAATACACAGCTAGCCCTCCACCAGTACCACCTTGGAGAGCAACAATTCCATGGAACAAAGCTGAGATGACCTCAGGTTCTCGGCCTTTACCATGGCCTGATCCACAGCTTTGTCAAGGCAGCGGAGGCGTGGTGGTAAAGCTCTTACAACTCTGGCCGCCACCTATTCAAACAAATGTTAAAGCTGAAATTGAAACACTGAATTTATATGGTGAGTCTCATCAAGTCTCCTTGAACTATAGTGTTGCCCAGTTCATGAGTAGAACAATTAATTCCACTGAGGGCTTGCTGCAAAATCTGATGGTTGGATGGTGTATTTGGCATGAGATATGTCTCTCTGGTGCCTTTAGGAAGGCCTATCAGCACACACATCATTCAACCTATGGTTGGGCATATGGGGATCATGAATTGTTCTTGCTGCTGATGCTGATTTCCCAGTTGTCACCTGATGCATGGTGTGATTGCTTATTCCGTTGTGATAATGCTGATGGTATTTGTACTTGCAAGTCACCCGAGAGAAGTACCAACTGCCATGCTCGGTGCTGCAGTGTTCCAACTCCATTTCAGGTTCAGAGCAAAAACAATGGCGTAATAGGTGATACTTCATGGACTCAATTCAGATCAAACAATGGTGATGCTGTGCTGTTGGTGCCACAACCATGGCCACAGCCGATTCTCTTCCCAGTTCATATTATGGTTGAGCTAGAGGTTTCGTTGAAGGGAATTATTGTCTCAACAAAAATGTTGGTCAACTTGCAATCTTTGGCTCCTCCTTCGCTTTGGAGAAATGAGGTATTCAATTTGTGTGCAACAGGAGGGCAAGGGCTAAATTTTTCCTGGAAATGTATATATGAAGAGCTACAGCAGTTGCAATGTACCTTTGAGTTTACTCTTTGGAATCAACATGGACAGACATATAAGCTATTGTTACAAAAGGAGCAGCTGAAACTTGGTGCAGTCTATCTCAGTTTGGAAGTAAAATCTTCAGAGACATGCTTCACTTGCCGGACTTACGAGGAGGACATGTTCTTACAAATCACAAATTTTGTAGGTCACAACTATGAGGGGAGTAACACTTGTTCTACCCATCAATTCAGTCATGGTTGGCCTGAATATTTGGTAAGAGCTAAATTCGTTCAATTCCAAATAGGCAAGATTCTTCAGGAGCAAGTGCAACTGGCATTGTATACAACATCACTGGTGCGGGTGACTTGGGATCCTGGTGGCTGTGTTGTATCGGCTTGGGGACAAGCCGAAATTCATGGAGGGAGGAATGTCATGGGCCTGGGCCTGTCAAGTGAGCTATGTTGATTGGGCTGGCTTGAGGCTGAGGGGAGGCAAAGGATACACTATAAAAGGAAAGAAGCAACAGGCATGAAGGGGATCGATGAATAGAACTTGTGGCTGCTGCCTCTTCTTCCTCCTCCTCCTCCGGATTTCTTTCCCACTCCTGCTGTTCTTCCAATCTCAAGCTCTGCTTCTCTAATACCAGTCCCTTGCTTCCCTTTCTAGTCTTCACTCCTATATTCCTTGCAATTGTATCCCAATTACTTGAGTGATTTCTGCTGTGGATCATTGGTTCCTTCCTGTGTTGATATTGATCTGTGAATGAGTTGACGGATCGTGACAATATGGTATCAGAGCAGTCGATTCGTGGGGTTTCTTGTGTGGAGATGAAGTGGGAGAGCGCTGGTGGTTAGAGGAACAGCCAACAACTTGGTGGTGGTGTCTTTGGAGGAGATGCCCACCACCTGTTCGATGAAATGTCGAGCTGTCCAAGAGCTGACTCAGCTGCTGTCCTTCGCGTCACTGTGAGCCAGATCATATATCCAGTGACATCTGAGGTGTTGCATCAAGTGTACGATACCTATGGAGCAGTGGCGGTGCAGGTTCTTGCGGTGAGCACATGGCAAGTCAAGGCTCTTGTGTCGTTCATGTCCAGCCATGACGCGGAGAGGGCTCGGTCTGCCACCCACGGTCGCGACATCTACGACGGGGGTTGCTTACTGGATGTGCAGCACGTCCAGATGTTCCCTGGAGATGGCGCCACCACCACGCACACCACCTGTTCGACGATGGTACCAAGTAGCGCCACCGCAAGGCCAGTGGCCAAGAGTACTGCTGCTGCACCAGAACGCGTGTTCCCTGCTACTACAGCTTCATCTGTACCCTCAATTACATCAGCAGCCATGGTGACATCGGTTCCTTTCAACGAGACCAAGAAGGCTGAGACTGACATGGACAAGGTGGTGGAGAACTTAGACAAGACCATTCAAGACCTGTGCACCAAGATCGATCGGATGCTAGAGGCATTTCGCGACACCAAGGTCAGTACAGAGGCCGGCTCAACTAACCTTGTTGAAACAGCCAAGCTTGGCATGGGAACAACCATCGAGTGTTCAATGAAGTGTGAGAACCAGTTGGCTGATGATGATGATGGCAAAGACATGGCCAAGGAGGAGTGGATGGAGCTCATGGAAGTGGATACCATGTTCACCGCTATGTATTTATGCTTCAGAGATCCATTTTTAATCATCAATGCAATTCCTCCCAGGAACTGGAGTTGGTGCTTGAGCCGTGACTACTTTGGAGTTGTAGGCCTCTCTTTTGTTTCATCGAAATTGGAAGTACTCTATGGTTGCTTTGACTGGAGCTTAGAATACACAGCTAGCCCTCCACCGGTACCACCTTGGAGAGCAACAATTCCATGGAACAAAGCTGAGATGACCTCAGGTTCTCGGCCTTTACCATGGCCTGATCCACAGCTTTGTCAAGGCAGCGGAGGCGTGGTGGTAAAGCTCTTACAACTCTAGCCGCCACCTATTCAAACAAATGTTAAAGCTGAAATTGAAACACTGAATTTATATGGTGAGTCTCATCAAGTCTCCTTGAACTACAGTGTTGCCCAGTTCATGAGTAGAACAATTAATTCCACAGAGGGCTTGCTGCAAAATCTGATGGTTGGATGGTGTATTTGGCATGAGATATGTCTCTCTGGTGCCTTTAGGAAGACCTATCAGCACACACATCATTCAACCTATGGTTGGGCATATGGGGATCATGAATTGTTCTTGCTGCTGATGCTGATTTCCCAGTTGTCACCTGATGCATGGTGTGATTGCTTATTCAGTTGTGATAATGCTGATGGTATTTGTACTTGCAAGTCACCCGAGAGAAGTACCAACTGCCATGCTCGGTGCTGCAGTGTTCCAACTCCATTTCAGGTTCAGAGCAAAAACAATGGCGTAATAGGTGATACTTCATGGACTCAATTCAGATCAAACAATGGTGATGCTGTGCTGTTGGTGCCACAACCATGGCCACAGCCGATTCTCTTCCCAGTTCATATTATGGTTGAGCTAGAGGTTTCGTTGAAGGGAATTATTGTCTCAACAAAAAAGTTGGTCAACTTGCAATCTTTGGCTCCTCCTTCGCTTTGGAGAAATGAGGTATTCAATTTGTGTGCAACAGGAGGGCAAGGGCTAAATTTTTCCTGGAAATGTATATATGAAGAGCTACAGCAGTTGCAATGTACCTTTGAGTTTACTCTTTGGAATCAAGATGGACAGACATATAAGCTATTGTTACAAAAGGAGCAGCTGAAACTTGGTGCAGTCTATCTCAGTTTGGAAGTAAAATCTTCAGAGACATGCTTCACTTGCCGGACTTACGAGGAGGACATGTTCTTACAAATCACAAATTTTGTAGGTCACAACTATGAGGGGAGTAACACTTGTTCTACCCATCAATTCAGTCATGGTTGGCCTGAATATTTGGTAAGAGCTAAATTCGTTCAATTCCAAAGAGGCAAGATTCTTCAGGAGCAAGTGCAACTGGCATTGTATACAACATCACTGGACGGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035671