Os11g0231600

From RiceWiki
Revision as of 09:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0231600| Description = Cyclin-like F-box domain containing protein| Version = NM_001074092.1 GI:115484832 GeneID:4350137| Length = 2234 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0231600

Description

Cyclin-like F-box domain containing protein

Version

NM_001074092.1 GI:115484832 GeneID:4350137

Length

2234 bp

Definition

Oryza sativa Japonica Group Os11g0231600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:6958067..6960300

Sequence Coding Region

6958335..6959237,6959667..6959822,6959904..6960146

Expression

GEO Profiles:Os11g0231600

Genome Context

<gbrowseImage1> name=NC_008404:6958067..6960300 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:6958067..6960300 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttccccgggccaagatgaggaaaatgtcggcggcgaggtcggggagggtaaagatcggggacctacccgaggatctgctccagcgcgtcgtctcgctactgtcggcgcgtcagaccgtgcagacgagcgcgctgtcccggcggtggcgccacctctggaggtcggcgccgctcctgcggatcgtcccggacgaggggttccagacggtgcgcgggctgaacgagttcgtcaagcatctgctcctcctccgcgacggcgcggcgccgctggacgcctgcgtgatcaacttctactgctgcgagttcgactcctaccagtatccgtcctccgacgagccggacgtcggcctgtggctccggcacgccgtgtcgcgcggagctcagctgatcagagtagaggtctacgtggaggacgagccggtttgtctgcccgacctgcctctcgtctccaaccatctgagggtgttggatcttagacttgtagagatcaaagacagcttggttgatttctcgggttgtccatcattggagcacccaaagtttcagggtggattcatcaatgctcgcaggatctcgtctccatcagtgaaacatctgatcatagacggtagcggctttaatcgcaagttccgcacccgtatttctaccccaggtcttatttctctggaactggagttctggggcagtactcctttgctcgaaggcatgccattgttggttactgcatctgtcaatctggatcatgagtgtagggatcgttgtgcgaacactgaatttggggattgcggtgatcctgaatgtgatgattgtgatgttatggtcagtgatggtaacggctgtgtgcttcttcaaggtttatcaggcgctacgactttggagttgacaactgagtctagggtgtttatgttcagaagggatctgatgtggtgccccatttttagcaagctaaagaccttgttagtcaatgagtggttcatgacttctaatatgtcagggctagcttgccttcttgagcactcgccaattgtagagaagctcactcttcaactttctaaggaacctcgaaattttgtggaaatcgaagacagtgacaagccatgcaaacaagcatttctgtttaagaacctcaatatagttgaaatcaaatgtcaagaaggtgatgaaagggttaagaaaattttaaagatcctgagtcaaaatggtatacctctggcgaagattaacgtcctacaaactaagagacggcctagacgtaagctatctactgtggttcacataattctgtgtttagatatataa</cdnaseq>

Protein Sequence

<aaseq>MFPRAKMRKMSAARSGRVKIGDLPEDLLQRVVSLLSARQTVQTS ALSRRWRHLWRSAPLLRIVPDEGFQTVRGLNEFVKHLLLLRDGAAPLDACVINFYCCE FDSYQYPSSDEPDVGLWLRHAVSRGAQLIRVEVYVEDEPVCLPDLPLVSNHLRVLDLR LVEIKDSLVDFSGCPSLEHPKFQGGFINARRISSPSVKHLIIDGSGFNRKFRTRISTP GLISLELEFWGSTPLLEGMPLLVTASVNLDHECRDRCANTEFGDCGDPECDDCDVMVS DGNGCVLLQGLSGATTLELTTESRVFMFRRDLMWCPIFSKLKTLLVNEWFMTSNMSGL ACLLEHSPIVEKLTLQLSKEPRNFVEIEDSDKPCKQAFLFKNLNIVEIKCQEGDERVK KILKILSQNGIPLAKINVLQTKRRPRRKLSTVVHIILCLDI</aaseq>

Gene Sequence

<dnaseqindica>269..1171#1601..1756#1838..2080#acgacgcaatttgggcttttggtgttgggcttcagatcgggccgaaggctgtgaaaagaaaccctaacacaccctcgcgcgggaaaagagaagggagcgcgcgccaattccgccgcgcaatgccccccccccccccagccaccggcgacggcgagtggagctcaccggtaacaaccactgatctcttgtccggttctcctcctctcctggctttccaaacgcgccgctttgtttcgtgatccgcagtgcagctaccctgttcgacggaatgtttccccgggccaagatgaggaaaatgtcggcggcgaggtcggggagggtaaagatcggggacctacccgaggatctgctccagcgcgtcgtctcgctactgtcggcgcgtcagaccgtgcagacgagcgcgctgtcccggcggtggcgccacctctggaggtcggcgccgctcctgcggatcgtcccggacgaggggttccagacggtgcgcgggctgaacgagttcgtcaagcatctgctcctcctccgcgacggcgcggcgccgctggacgcctgcgtgatcaacttctactgctgcgagttcgactcctaccagtatccgtcctccgacgagccggacgtcggcctgtggctccggcacgccgtgtcgcgcggagctcagctgatcagagtagaggtctacgtggaggacgagccggtttgtctgcccgacctgcctctcgtctccaaccatctgagggtgttggatcttagacttgtagagatcaaagacagcttggttgatttctcgggttgtccatcattggagcacccaaagtttcagggtggattcatcaatgctcgcaggatctcgtctccatcagtgaaacatctgatcatagacggtagcggctttaatcgcaagttccgcacccgtatttctaccccaggtcttatttctctggaactggagttctggggcagtactcctttgctcgaaggcatgccattgttggttactgcatctgtcaatctggatcatgagtgtagggatcgttgtgcgaacactgaatttggggattgcggtgatcctgaatgtgatgattgtgatgttatggtcagtgatggtaacggctgtgtgcttcttcaaggtttatcaggcgctacgactttggagttgacaactgagtctagggtggtatgcttcaacttctggcaattcctgctattctgcttgtttgttgtccatttcttatttttcaatatttgcatagtcatatgcccccatattagtttattttcaaacaagctgattttttacacatttccatcagcaagttcttgtttatcattatgtttcactgataacattcctagtggttgatttgttttggaaaaaaaaatcaaagaagtttcttagatggaatatactatatcttatgaacacatctgatatggccaatgtatatgtaataagatatacctctataagctagaggaacttataaatcatgatcaaaataaattaattacttgtagtttattttctttcaattctcaaatgcaaaattcctttgtgtttcggattaatttttgaattcatctacctacactgcaatttgtccagtttatgttcagaagggatctgatgtggtgccccatttttagcaagctaaagaccttgttagtcaatgagtggttcatgacttctaatatgtcagggctagcttgccttcttgagcactcgccaattgtagagaagctcactcttcaactttctaaggtatgtgacttcaagatggattgctttgtacaattataattcttggatggtttatgttagcgataaccttacttgctacaggaacctcgaaattttgtggaaatcgaagacagtgacaagccatgcaaacaagcatttctgtttaagaacctcaatatagttgaaatcaaatgtcaagaaggtgatgaaagggttaagaaaattttaaagatcctgagtcaaaatggtatacctctggcgaagattaacgtcctacaaactaagagacggcctagacgtaagctatctactgtggttcacataattctgtgtttagatatataagatgtgaataaattatcaagttaactaaaaggtgcatgtctaagaaatgtattggtagcacatacatttgttaaacctcttttctctagagatctctatgtaatccagtaattaatgtatatctcgattaggtagtttttattggggaactttc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0231600, RefSeq:Os11g0231600