BGIOSGA035686

From RiceWiki
Revision as of 09:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035686| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035686, complete gene.| tag = OS11G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035686

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035686, complete gene.

LocusTag

OS11G0692100

Ensembl Transcript ID

BGIOSGA035686-TA

Ensembl Protein ID

BGIOSGA035686-PA

Length

3394

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21956842..21960235

Sequence Coding Region

21956842..21959746,21959847..21960235

Genome Context

<gbrowseImage1> name=IndicaChromosome11:21956842..21960235 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:21956842..21960235 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTTAGGATCTCTAGTATGCTTATCAGCTTTGTTGTTGATCCCCCTGTCCACTGTGTCTGCTGCTTCTTCTCCAGGTCTGACCAAGAGCAGCAACAACGACACTGACCTCACTGCACTTCTGGCTTTCAAAGCGCAGTTCCATGATCCTGACAACATCCTTGCTGGCAACTGGACCCCTGGCACGCCGTTCTGCCAATGGGTGGGCGTCTCGTGCAGCCGCCATCAGCAGCGTGTCGTTGCCCTGGAGCTGCCGAACGTTCCCCTGCAAGGAGAGCTCAGCTCCCACCTCGGTAACCTATCTTTCCTCTCCGTCCTCAATCTCACCAACACTGGCCTCACAGGCTTGTTGCCGGATGACATAGGAAGGCTGCATCGCCTGGAGCTCCTTGATCTTGGCCACAATGCCATGTTAGGTGGCATCCCAGCCACCATAGGGAACCTCTCCAGGCTTCAGCTTCTTAATCTCCAGTTTAACCAGCTATCTGGTCGAATCCCAACAGAGTTGCAGGGCCTGCGTAGCCTTATCAACATAAATATCCAGACGAATTACCTCACTGGCTTGGTACCAAACGACCTATTCAACCATACGCCTTCATTGCGTCGCCTGATCATGGGCAACAATAGCCTGTCAGGACCAATACCAGGTTGCATCGGCTCCTTGCACATGCTTGAGTGGCTTGTCCTACAGCACAATAATCTCACAGGCCCAGTGCCACCATCCATCTTCAACATGTCTAGGTTAACTGTTATTGCTCTTGCCTCGAATGGCTTAACTGGCCCTATCCCGGGCAACACAAGTTTCAGCCTCCCGGCACTACAACGGATCTACATTAGTATAAACAATTTTACTGGTCAAATTCCAATGGGACTGGCAGCATGCCCATACCTTCAAACCATTTCCATGCATGACAATCTATTCGAGGGTGTTTTGCCATCATGGCTGTCCAAGTTGAGGAATCTCACTGGCCTCACCTTGAGTTGGAATAACTTTGATGCTGGTCCGATCCCTGCAGGACTTAGCAACCTCACCATGCTGACTGCACTAGATCTCAACGGTTGCAACCTAACAGGAGCCATCCCGGTGGATATTGGACAGCTAGACCAACTTTGGGAGTTACAACTTTTAGGGAACCAACTAACAGGACCGATTCCAGCTTCTCTTGGCAACCTGTCTTCATTAGCACGTCTGGTATTGAACGAAAACCAGTTGGATGGATCGGTTCCAGCATCAATAGGGAACATTAACTATTTAACAGACTTTATTGTCTCGGAAAACCGTTTACATGGGGATCTCAACTTCCTTTCTACGTTTTCCAACTGTAGAAATCTTTCCTGGATCTATATTGGCATGAATTACTTCACTGGAAGCATCCCAGATTACATTGGGAACCTATCAGGTACACTGCAAGAATTCAGATCACATAGGAACAAGTTAACTGGTCAACTTCCACCTTCCTTTTCGAATTTAACTGGCCTTAGAGTGATAGAACTTTCAGACAACCAACTGCAAGGGGCAATTCCAGAGTCAATCATGGAGATGGAGAATCTCCTTGAGCTTGATCTTAGTGGAAATAGCTTGGTTGGCTCCATCCCATCAAATGCCGGAATGCTAAAGAATGCAGAACATTTATTCCTTCAAGGCAACAAATTCTCTGGCTCCATACCAAAGGGCATCGGCAACCTCACCAAGTTAGAGATCCTAAGGTTATCTAATAACCAATTATCATCCACTTTACCACCCAGCTTATTTCGTCTTGAAAGCCTTATCCAGCTAAATCTGTCTCAAAACTTCTTGAGTGGTGCATTGCCAATTGATATAGGCCAACTGAAGCGAATAAACAGCATGGATCTATCCAGGAACCGCTTTCTTGGGAGCCTCCCTGATTCGATTGGGGAACTTCAGATGATAACCATCTTGAACCTATCAACCAATTCAATCGATGGTTCGATTCCAAATTCTTTTGGCAACTTGACAGGCTTGCAAACTTTGGATCTATCTCACAACAGAATTTCGGGTACAATCCCAGAATATCTGGCCAATTTTACCATCCTCACAAGCTTGAACCTGTCTTTCAACAATCTGCATGGTCAGATACCAGAAGGAGGTGTCTTCACAAACATCACGCTACAATCCTTGGTGGGAAACCCAGGGCTATGTGGTGTTGCCCGTTTAGGATTTTCACTGTGCCAAACCTCTCACAAAAGAAATGGCCAAATGCTAAAATATTTACTCCTCGCTATATTCATATCAGTTGGAGTTGTAGCTTGTTGCCTATATGTAATGATTAGGAAGAAAGTTAAGCATCAAGAGAATCCTGCTGATATGGTTGACACTATAAACCATCAATTACTCTCATATCATGAGCTTGCTCATGCTACTAATGATTTCAGTGATGATAATATGTTGGGGTCTGGAAGCTTTGGAAAAGTTTTTAAGGGTCAGCTGAGCAGCGGTTTGGTGGTTGCCATAAAAGTTATACACCAGCATCTGGAACATGCCATGAGAAGCTTTGATACTGAGTGCCGTGTTCTTCGAATGGCTCGACATCGCAACCTGATAAAGATACTGAACACATGTTCCAACCTGGACTTCAGAGCACTGGTTCTTCAGTACATGCCCAACGGAAGCTTAGAGGCACTCCTACACTCTGATCAAAGAATGCAATTAGGTTTCCTTGAGAGGTTGGACATTATGCTAGACGTGTCGCTGGCAATGGAATACCTGCACCATGAGCACTGCGAGGTGGTCCTGCACTGTGACTTGAAGCCTAGCAACGTACTATTTGATGATGATATGACGGCGCATGTGTCAGACTTTGGCATTGCAAGGCTGCTGTTAGGTGATGATAACTCCATCATTTCTGCTAGCATGCCAGGAACTGTTGGGTACATGGCACCAGAGTACGGGGCCCTTGGTAAAGCGTCACGGAAGAGCGATGTATTCAGCTATGGGATCATGTTGCTTGAAGTGTTCACTGCGAAGAGACCAACAGATGCTATGTTTGTGGAAGAACTAAACATCAGGCAGTGGGTTCTTCAGGCATTTCCTGCAAACCTTGTCCATGTCGTAGATGGCCAACTTCTACAGGACAGCTCTTCTTCTACCAGTAGCATTGATGCCTTTCTTATGCCAGTGTTTGAGCTGGGCTTGCTCTGCTCGTCTGACTCGCCAGAGCAAAGAATGGTGATGAGTGATGTTGTTGTGACGTTGAAGAAGATTAGGATGGAGTACGTCAAGTCGATAGCAACTATGGGAAGAGATGAGAACCAAACAGCAGTGTTCCATTGA</cdnaseq>

Protein Sequence

<aaseq>MALGSLVCLSALLLIPLSTVSAASSPGLTKSSNNDTDLTALLAFKAQFHDPDNILAGNWTPGTPFCQWVGVSCSRHQQRVVALELPNVPLQGELSSHLGNLSFLSVLNLTNTGLTGLLPDDIGRLHRLELLDLGHNAMLGGIPATIGNLSRLQLLNLQFNQLSGRIPTELQGLRSLININIQTNYLTGLVPNDLFNHTPSLRRLIMGNNSLSGPIPGCIGSLHMLEWLVLQHNNLTGPVPPSIFNMSRLTVIALASNGLTGPIPGNTSFSLPALQRIYISINNFTGQIPMGLAACPYLQTISMHDNLFEGVLPSWLSKLRNLTGLTLSWNNFDAGPIPAGLSNLTMLTALDLNGCNLTGAIPVDIGQLDQLWELQLLGNQLTGPIPASLGNLSSLARLVLNENQLDGSVPASIGNINYLTDFIVSENRLHGDLNFLSTFSNCRNLSWIYIGMNYFTGSIPDYIGNLSGTLQEFRSHRNKLTGQLPPSFSNLTGLRVIELSDNQLQGAIPESIMEMENLLELDLSGNSLVGSIPSNAGMLKNAEHLFLQGNKFSGSIPKGIGNLTKLEILRLSNNQLSSTLPPSLFRLESLIQLNLSQNFLSGALPIDIGQLKRINSMDLSRNRFLGSLPDSIGELQMITILNLSTNSIDGSIPNSFGNLTGLQTLDLSHNRISGTIPEYLANFTILTSLNLSFNNLHGQIPEGGVFTNITLQSLVGNPGLCGVARLGFSLCQTSHKRNGQMLKYLLLAIFISVGVVACCLYVMIRKKVKHQENPADMVDTINHQLLSYHELAHATNDFSDDNMLGSGSFGKVFKGQLSSGLVVAIKVIHQHLEHAMRSFDTECRVLRMARHRNLIKILNTCSNLDFRALVLQYMPNGSLEALLHSDQRMQLGFLERLDIMLDVSLAMEYLHHEHCEVVLHCDLKPSNVLFDDDMTAHVSDFGIARLLLGDDNSIISASMPGTVGYMAPEYGALGKASRKSDVFSYGIMLLEVFTAKRPTDAMFVEELNIRQWVLQAFPANLVHVVDGQLLQDSSSSTSSIDAFLMPVFELGLLCSSDSPEQRMVMSDVVVTLKKIRMEYVKSIATMGRDENQTAVFH</aaseq>

Gene Sequence

<dnaseqindica>1..2905#3006..3394#ATGGCTTTAGGATCTCTAGTATGCTTATCAGCTTTGTTGTTGATCCCCCTGTCCACTGTGTCTGCTGCTTCTTCTCCAGGTCTGACCAAGAGCAGCAACAACGACACTGACCTCACTGCACTTCTGGCTTTCAAAGCGCAGTTCCATGATCCTGACAACATCCTTGCTGGCAACTGGACCCCTGGCACGCCGTTCTGCCAATGGGTGGGCGTCTCGTGCAGCCGCCATCAGCAGCGTGTCGTTGCCCTGGAGCTGCCGAACGTTCCCCTGCAAGGAGAGCTCAGCTCCCACCTCGGTAACCTATCTTTCCTCTCCGTCCTCAATCTCACCAACACTGGCCTCACAGGCTTGTTGCCGGATGACATAGGAAGGCTGCATCGCCTGGAGCTCCTTGATCTTGGCCACAATGCCATGTTAGGTGGCATCCCAGCCACCATAGGGAACCTCTCCAGGCTTCAGCTTCTTAATCTCCAGTTTAACCAGCTATCTGGTCGAATCCCAACAGAGTTGCAGGGCCTGCGTAGCCTTATCAACATAAATATCCAGACGAATTACCTCACTGGCTTGGTACCAAACGACCTATTCAACCATACGCCTTCATTGCGTCGCCTGATCATGGGCAACAATAGCCTGTCAGGACCAATACCAGGTTGCATCGGCTCCTTGCACATGCTTGAGTGGCTTGTCCTACAGCACAATAATCTCACAGGCCCAGTGCCACCATCCATCTTCAACATGTCTAGGTTAACTGTTATTGCTCTTGCCTCGAATGGCTTAACTGGCCCTATCCCGGGCAACACAAGTTTCAGCCTCCCGGCACTACAACGGATCTACATTAGTATAAACAATTTTACTGGTCAAATTCCAATGGGACTGGCAGCATGCCCATACCTTCAAACCATTTCCATGCATGACAATCTATTCGAGGGTGTTTTGCCATCATGGCTGTCCAAGTTGAGGAATCTCACTGGCCTCACCTTGAGTTGGAATAACTTTGATGCTGGTCCGATCCCTGCAGGACTTAGCAACCTCACCATGCTGACTGCACTAGATCTCAACGGTTGCAACCTAACAGGAGCCATCCCGGTGGATATTGGACAGCTAGACCAACTTTGGGAGTTACAACTTTTAGGGAACCAACTAACAGGACCGATTCCAGCTTCTCTTGGCAACCTGTCTTCATTAGCACGTCTGGTATTGAACGAAAACCAGTTGGATGGATCGGTTCCAGCATCAATAGGGAACATTAACTATTTAACAGACTTTATTGTCTCGGAAAACCGTTTACATGGGGATCTCAACTTCCTTTCTACGTTTTCCAACTGTAGAAATCTTTCCTGGATCTATATTGGCATGAATTACTTCACTGGAAGCATCCCAGATTACATTGGGAACCTATCAGGTACACTGCAAGAATTCAGATCACATAGGAACAAGTTAACTGGTCAACTTCCACCTTCCTTTTCGAATTTAACTGGCCTTAGAGTGATAGAACTTTCAGACAACCAACTGCAAGGGGCAATTCCAGAGTCAATCATGGAGATGGAGAATCTCCTTGAGCTTGATCTTAGTGGAAATAGCTTGGTTGGCTCCATCCCATCAAATGCCGGAATGCTAAAGAATGCAGAACATTTATTCCTTCAAGGCAACAAATTCTCTGGCTCCATACCAAAGGGCATCGGCAACCTCACCAAGTTAGAGATCCTAAGGTTATCTAATAACCAATTATCATCCACTTTACCACCCAGCTTATTTCGTCTTGAAAGCCTTATCCAGCTAAATCTGTCTCAAAACTTCTTGAGTGGTGCATTGCCAATTGATATAGGCCAACTGAAGCGAATAAACAGCATGGATCTATCCAGGAACCGCTTTCTTGGGAGCCTCCCTGATTCGATTGGGGAACTTCAGATGATAACCATCTTGAACCTATCAACCAATTCAATCGATGGTTCGATTCCAAATTCTTTTGGCAACTTGACAGGCTTGCAAACTTTGGATCTATCTCACAACAGAATTTCGGGTACAATCCCAGAATATCTGGCCAATTTTACCATCCTCACAAGCTTGAACCTGTCTTTCAACAATCTGCATGGTCAGATACCAGAAGGAGGTGTCTTCACAAACATCACGCTACAATCCTTGGTGGGAAACCCAGGGCTATGTGGTGTTGCCCGTTTAGGATTTTCACTGTGCCAAACCTCTCACAAAAGAAATGGCCAAATGCTAAAATATTTACTCCTCGCTATATTCATATCAGTTGGAGTTGTAGCTTGTTGCCTATATGTAATGATTAGGAAGAAAGTTAAGCATCAAGAGAATCCTGCTGATATGGTTGACACTATAAACCATCAATTACTCTCATATCATGAGCTTGCTCATGCTACTAATGATTTCAGTGATGATAATATGTTGGGGTCTGGAAGCTTTGGAAAAGTTTTTAAGGGTCAGCTGAGCAGCGGTTTGGTGGTTGCCATAAAAGTTATACACCAGCATCTGGAACATGCCATGAGAAGCTTTGATACTGAGTGCCGTGTTCTTCGAATGGCTCGACATCGCAACCTGATAAAGATACTGAACACATGTTCCAACCTGGACTTCAGAGCACTGGTTCTTCAGTACATGCCCAACGGAAGCTTAGAGGCACTCCTACACTCTGATCAAAGAATGCAATTAGGTTTCCTTGAGAGGTTGGACATTATGCTAGACGTGTCGCTGGCAATGGAATACCTGCACCATGAGCACTGCGAGGTGGTCCTGCACTGTGACTTGAAGCCTAGCAACGTACTATTTGATGATGATATGACGGCGCATGTGTCAGACTTTGGCATTGCAAGGCTGCTGTTAGGTGATGATAACTCCATCATTTCTGCTAGCATGCCAGGAACTGTTGGGTACATGGCACCAGGTAATTAGTCGCATTTGTGCTTGATAAAACCTGTTGATCTTTTATAGAGTAATTATCAAGTGGTGCAACTAATGTTTGGCGACCAATTTTTCTTGAGCAGAGTACGGGGCCCTTGGTAAAGCGTCACGGAAGAGCGATGTATTCAGCTATGGGATCATGTTGCTTGAAGTGTTCACTGCGAAGAGACCAACAGATGCTATGTTTGTGGAAGAACTAAACATCAGGCAGTGGGTTCTTCAGGCATTTCCTGCAAACCTTGTCCATGTCGTAGATGGCCAACTTCTACAGGACAGCTCTTCTTCTACCAGTAGCATTGATGCCTTTCTTATGCCAGTGTTTGAGCTGGGCTTGCTCTGCTCGTCTGACTCGCCAGAGCAAAGAATGGTGATGAGTGATGTTGTTGTGACGTTGAAGAAGATTAGGATGGAGTACGTCAAGTCGATAGCAACTATGGGAAGAGATGAGAACCAAACAGCAGTGTTCCATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035686