Os11g0235200

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Revision as of 09:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0235200| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001074096.1 GI:115484840 GeneID:435014...")
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Gene Name

Os11g0235200

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001074096.1 GI:115484840 GeneID:4350145

Length

5257 bp

Definition

Oryza sativa Japonica Group Os11g0235200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:7176158..7181414

Sequence Coding Region

7176608..7177532,7177841..7177965,7179701..7180180,7180759..7180976,7181105..7181243

Expression

GEO Profiles:Os11g0235200

Genome Context

<gbrowseImage1> name=NC_008404:7176158..7181414 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:7176158..7181414 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gctaatatggatgttgagtcaaggcaaggccccaagggtggtgacaccatggctgcctccgaggtctccgtggactggaggggcaggccttgcggctctcgcaagcatggcggcatgaaagcggccgtctttgtgctagggatccaggcgttcgagatgatggcgatcgcggcggtggggaacaacctgatcacctacgtcttcaacgagatgcactacccgctgtcaaagtcggccaacatcgtgaccaacttcattggcaccgtcttcctcctctccctcctcggtggcttcctctccgactcctacctcggaagcttctggaccatgctcatcttcggcttcgtcgagctctccgggttcatactgctggccgtgcaggcgcacctgccgcagctgcggccgccggcgtgcgacatgatggcggcggcggcggcggaggggggatgcgaggaggcgagcggggtgaaggcggggatcttcttcgcggcgctgtacctggtggcgctggggagcgggtgcctcaagcccaacatcatcgcgcacggcgccgaccagttccggcgcggcggcggcggcggcggcgacggcgatggcgacgatggcggcgacgggaagcggctgtcgagctacttcaacgcggcctacttcagcttctgcgtgggggagctggtggcgctgacggtgctggtgtgggtgcagacgaggtcggggatggacgtggggttcggggtgtcggcggccgccatggccgtggggctggtcagcctcgtcgccggcgtcttcttctaccggaacaagccgccgcagggcagcatcttcatgcccatcgccaaggttttcgtcgcggcggtaaccaagaggaaacaagtgtgcccatcatcatcgtcgacgacagccgcctcgcatgctgtgatccccgccaccggtgccgcccctgtccaccgcatcaacaaattcaggttcttggacaaggcgtgcgtgaaggttcaggacggccatggcggcggcggcgacggggggaaggagagcgtgtggccgccgtgcacgccggcggaggtggagcaggtgaaggtgctactgtgcgtggtgcccatcttcgcgtgcaccatcgtcttcaacaccatcctggcgcagctgcagacgttctccgtgcagcagggctccgccatggacacccgcatcggcggcggcggcggcggcgccgccttccacatcccgccggcgtcgctgcaggccatcccctacctcgtcctcatcgcgctggtgccggcgtacgaggcgtgcttcgtgccggccatgcgccgcgccacgggcgtggacaccggcatcaccccgctccagcggatcggggtcggcctcttcgccgtcaccttctccatggtcgccgccgcgctcgtcgaggcacaccgccgccgccacgccggcgacgggctcctctccatcttctggatcgcgccgcagttcctggtgttcggcgtgtccgagatgttcaccgccgtggggctcatcgagttcttctacaagcagtcgctctccggcatgcaggccttcctcacctcaatgacctactgctcctactccttcggcttctacctcagctccctcctcgtctcgctcgtcaacaaggtcacctcgggcgacggcgccggcgccggcggcggcggctggctcagcgacaacgacctcaacaaggacaggctcgacctcttctactggctcctcgccgggctcagcctcctcaacttcttcaactacctcttctggtcgaggtggtactccaagagtgtggagacgaccgtgcaggtcgccggagttggaggagaaggcggcggcggcgagcagcaggaggagaagggtgttgacgaggtcaacatgggtcactga</cdnaseq>

Protein Sequence

<aaseq>ANMDVESRQGPKGGDTMAASEVSVDWRGRPCGSRKHGGMKAAVF VLGIQAFEMMAIAAVGNNLITYVFNEMHYPLSKSANIVTNFIGTVFLLSLLGGFLSDS YLGSFWTMLIFGFVELSGFILLAVQAHLPQLRPPACDMMAAAAAEGGCEEASGVKAGI FFAALYLVALGSGCLKPNIIAHGADQFRRGGGGGGDGDGDDGGDGKRLSSYFNAAYFS FCVGELVALTVLVWVQTRSGMDVGFGVSAAAMAVGLVSLVAGVFFYRNKPPQGSIFMP IAKVFVAAVTKRKQVCPSSSSTTAASHAVIPATGAAPVHRINKFRFLDKACVKVQDGH GGGGDGGKESVWPPCTPAEVEQVKVLLCVVPIFACTIVFNTILAQLQTFSVQQGSAMD TRIGGGGGGAAFHIPPASLQAIPYLVLIALVPAYEACFVPAMRRATGVDTGITPLQRI GVGLFAVTFSMVAAALVEAHRRRHAGDGLLSIFWIAPQFLVFGVSEMFTAVGLIEFFY KQSLSGMQAFLTSMTYCSYSFGFYLSSLLVSLVNKVTSGDGAGAGGGGWLSDNDLNKD RLDLFYWLLAGLSLLNFFNYLFWSRWYSKSVETTVQVAGVGGEGGGGEQQEEKGVDEV NMGH</aaseq>

Gene Sequence

<dnaseqindica>3883..4807#3450..3574#1235..1714#439..656#172..310#gcctgaccacacaagcacaaagcaagcactatcaccaaaaggatcagagaagaaactgatatcactatctgatcagtgtagcattgcagcctctcttcttggtaggagtgagctagcacagtgaagagctaattaagccatttgtgtgagcttgcgttgagtgagctctgagctaatatggatgttgagtcaaggcaaggccccaagggtggtgacaccatggctgcctccgaggtctccgtggactggaggggcaggccttgcggctctcgcaagcatggcggcatgaaagcggccgtctttgtgctaggttcgtttaattagttagttactctcttaatccattatttcttgggtagaaatatgttgcttgatctgatttgttcttgtttgtgtttgtgttttgttggatatcgtttgcattgatgatgattgcagggatccaggcgttcgagatgatggcgatcgcggcggtggggaacaacctgatcacctacgtcttcaacgagatgcactacccgctgtcaaagtcggccaacatcgtgaccaacttcattggcaccgtcttcctcctctccctcctcggtggcttcctctccgactcctacctcggaagcttctggaccatgctcatcttcggcttcgtcgagctctccgtaagaaattgattcatccatccttcatcgtcgatctcttctctttgatatcgcactacgataaaattgacattctttacacctagatgcaactttttgggtccttttttagactgcatttcttggctccttgcaagcaagaacagctgaacaggatcggatcttgtttgtttgtttgtttaatcatgtagggatgttgtttctaggtaggattatatataaaattaaccagataagacacgcgaaagattcagcgactgttcatcgtgccgcgaaaatgatgaggttttgaggaggaggcagcaagttcagcgtaaaggtgagagagagagtggaagaaaatcatggctgcctccatccaatgcggccatgctagctagtgcgccgcccaaaacgccactcgactccacaatatcatttcttggcttttgattttaattttcgagcaggttcattgcatcccatcccatgaccatatccatggcgataattaaccattactgattaatgcgccgccaactttagttagtttagctaataatttttgttgtttttttatttctaatttttcttggcaggggttcatactgctggccgtgcaggcgcacctgccgcagctgcggccgccggcgtgcgacatgatggcggcggcggcggcggaggggggatgcgaggaggcgagcggggtgaaggcggggatcttcttcgcggcgctgtacctggtggcgctggggagcgggtgcctcaagcccaacatcatcgcgcacggcgccgaccagttccggcgcggcggcggcggcggcggcgacggcgatggcgacgatggcggcgacgggaagcggctgtcgagctacttcaacgcggcctacttcagcttctgcgtgggggagctggtggcgctgacggtgctggtgtgggtgcagacgaggtcggggatggacgtggggttcggggtgtcggcggccgccatggccgtggggctggtcagcctcgtcgccggcgtcttcttctaccggaacaagccgccgcagggcagcatcttcatgcccatcgccaaggtacgtacgttatgccgtacaatacaatcgtcgtacgtgtacggttcgtcatgtacttttatacgctttcttcttttttttttttagagaaaaatatttcttacccggcctctacatccaatcagatatatgcagactttttaaattagaaacttaactctcaaacaatctaatctgaaacttgctactacgattaaactctagatctttaggatacgcttaggacattgcaaccacaattgcatcttcttttcttttctagttggcacattgaaatatcttttgatataattttgacagccatcttttttttaaatgaactctctgtttctaaaatataataacatagtattccattccatgtaacctagtactacgaatctatgtttaattgaactatgaatttagtagatttatagtactgtgttggtgtctattctagtactacgaatttatctcattctgttttagcatcttatattttaggagaggtaggattatttttaatcggacggagtatacaagttggaaacaaatactacatcattgtgttgcatttgcaaaagcagagccaaccaactctgtttttgtgccagctactatattcccctaaaaatattgttgcattcataaatattggaggtcaattttaagctaggtctatgttctctgttcctgcatatggtagttacttgaaaaatcctgaaaatatgataacgtgcattatggtgccatctgtcgctacacaaatatatagtaatatataagtataaaggttagagaaaacatggccgtgggccctagcaatgcgtttctgcactagctaaatagaatatatataatatgtgacaagactaattaatattaagaagcaccataggtagatcaaatttaaaaatgtaaggatgaaaaggcatgtgtatgtacaacaaattaaacaacagaaagtttgaccatacgtatcatcctgattccttgtttggaaagtactactccagatacgctgcttttatatactagtataaaagcaaaaccgcctattttcgttaaatataatgcataatctttatttgatccaaaaaagctacatgatcaaacaggagtttggtacagggactattttatcctcatagtcacctcgtgcactaccacataaaaagcacacgagatcatgggtttacaaccgtttctacattaaacaaaatgaaatgctacctagtttattgccaaatgaagtatttagtcaataaaggaaaagaaagcatatatatgatttactgaatgagataataatgtatatgtatgttgggataaaaaaaataaaactgatgattttaagttacacactggctggcctcctctgccttttctttcttctttctgggacaagttgacaagggctagtggctcagctttatttctctcttttgtgtgggtcaagaattaccactgtctgctgggaggtacctttgattattgatcacagaaatggaggcccattctgttatgcttgtgatacatcaatcatgtttgcatgtgtggggagagacatgtaacatgactgacaatgatctcaggacagcatatatatctttccagcttaattttgtttttagttcttgacttagatcggtataaaccccctaaaactcaattgcacgtgaaaataacaaactctcactcgatcgctgacattttgagctgatggtcggtacatgtgactcaatatgtataggttttcgtcgcggcggtaaccaagaggaaacaagtgtgcccatcatcatcgtcgacgacagccgcctcgcatgctgtgatccccgccaccggtgccgcccctgtccaccgcatcaacaaattcaggtaggtaaaaaaatatttgtaagtggcactgtaatatactacttatttttaaaaaatatatggcaccgttaacttttcgcataatgtttgaccattcgtcttattcaaaaatttaatattaattcataaaaatataagttaagattatattttatttgataataaaacaagtcacaacaagataaaaataaaatttatataatttttttaataagattaatagataaatattatgccaaaagtcaaatggcgtgatatatttcgaaggagtataatagtttactcatttcatgtatgcatgcttacaggttcttggacaaggcgtgcgtgaaggttcaggacggccatggcggcggcggcgacggggggaaggagagcgtgtggccgccgtgcacgccggcggaggtggagcaggtgaaggtgctactgtgcgtggtgcccatcttcgcgtgcaccatcgtcttcaacaccatcctggcgcagctgcagacgttctccgtgcagcagggctccgccatggacacccgcatcggcggcggcggcggcggcgccgccttccacatcccgccggcgtcgctgcaggccatcccctacctcgtcctcatcgcgctggtgccggcgtacgaggcgtgcttcgtgccggccatgcgccgcgccacgggcgtggacaccggcatcaccccgctccagcggatcggggtcggcctcttcgccgtcaccttctccatggtcgccgccgcgctcgtcgaggcacaccgccgccgccacgccggcgacgggctcctctccatcttctggatcgcgccgcagttcctggtgttcggcgtgtccgagatgttcaccgccgtggggctcatcgagttcttctacaagcagtcgctctccggcatgcaggccttcctcacctcaatgacctactgctcctactccttcggcttctacctcagctccctcctcgtctcgctcgtcaacaaggtcacctcgggcgacggcgccggcgccggcggcggcggctggctcagcgacaacgacctcaacaaggacaggctcgacctcttctactggctcctcgccgggctcagcctcctcaacttcttcaactacctcttctggtcgaggtggtactccaagagtgtggagacgaccgtgcaggtcgccggagttggaggagaaggcggcggcggcgagcagcaggaggagaagggtgttgacgaggtcaacatgggtcactgacatgtgggttcgaaccgcacgtctagtatattaggtggattattaatcatttaacctagtcttaaccttttttttatggtttttccttgtatggaaaaatattagtaagggtggatgtatatgagtccccacctaattaaggagagtgtgtgtgatgtataaattaattaatcaaaagggattaggtgattattacttagtaatgatccctgattaggtcaagtcaaaaggtagtagttctgagtttgactctgcaaggatgcaagagtagtggtatttgggtagggatcaagtgatcaagtacgtatctagtccttttctttaatgataaggagctagtatatatctatgtactttatatatgtagctatcatgtaaatgacaaaaggatttgccataaaagcaaagtactgataatagttggtgcaaaaaatactttcactgttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0235200, RefSeq:Os11g0235200