BGIOSGA000015

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Revision as of 09:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000015| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000015, complete gene.| tag = P0698H1...")
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Gene Name

BGIOSGA000015

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000015, complete gene.

LocusTag

P0698H10.18

Ensembl Transcript ID

BGIOSGA000015-TA

Ensembl Protein ID

BGIOSGA000015-PA

Length

3123

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:47039746..47042868

Sequence Coding Region

47042811..47042868,47041982..47042304,47041766..47041901,47041471..47041613,47041208..47041331
,47039746..47040188

Genome Context

<gbrowseImage1> name=IndicaChromosome01:47039746..47042868 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:47039746..47042868 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAATTGCTGCGGAACCAAGATTAGCTCCGACGCCATCTCCCGGAACGCATCTGGTTCAAGAAGAAGAAGATCAGGAAGCAGGAGGAAGGGGACGGGGCTGAGCAGCCGGGTGTCGTCGTCGGTGGCGGCGGTGACCCCACGGAGCGAGGGCGAGATCCTGCGGTGTGCCAACGTGAGGAGCTTCGCGTTCAACGAGCTCAAGACGGCGACGAGGAACTTCCGGCCCGACAGCGTGCTCGGCGAGGGAGGCTTCGGCTCCGTCTTCAAGGGTTGGGTGGACGAGAACACCTTCCTCCCCAGCAGGCCCGGCACCGGCATGGTCATCGCCGTCAAGAAGCTCAACCAGGACGGCTTCCAGGGCCACAGGGAATGGCTGGCCGAAGTGAACTACCTTGGGCAACTGTCACACCCAAATCTTGTAAAGCTTGTAGGCTACTGCCTTCAAGATGAGCAGAGGCTTCTTGTCTACGAGTTCATGCCTCGGGGAAGCTTGGAGAATCATCTTTTCAGGAGGGGCTCACATTTTCAGCCTCTCTCCTGGAATCTTCGAATGAAAGTTGCCCTTGGAGCAGCAAAGGGACTTGCCTTTCTCCACAGCGACAAGGCCAAAGTTATCTACCGTGATTTCAAGACTTCCAATGTTCTTCTCGATTCGAACTACAATGCAAAGCTGTCTGATTTCGGGTTGGCAAAGGATGGGCCAACTGGTGACAAGAGCCATGTCTCAACAAGAGTTATGGGCACATACGGATATGCTGCTCCTGAATATCTTGCGACAGGGCATCTGAGTGCGAAGAGCGACGTGTACAGCTTCGGGGTGGTGATGGTGGAGATGCTGTCGGGGCGGCGCGCGCTGGACAAGAACCGCCCCGCCGGCGAGCACAACCTGGTGGAGTGGGCTCGGCCCTACCTCAGCAGCAGGCGCCGGATCTTCCGCATCCTGGACGCCCGCCTCGCCGGCCAGTACTCGCTCGCCGGAGCCCACAAAGCGGCGGCGCTGGCGCTGCAGTGCCTCTCCGCCGACGCCAGGAACCGGCCCACCATGCACCAGGTGGTCGCCGCGCTGGAGCAGCTTCAGGAGACGACGACCACGTCTCATCATCATCGGTCGCCGCAGAGCAGGATGTTGCTCGGCGGCCGTGGCTTCAACGCCAGCGGCAGGTCGTCTGCTGGTGCTGGTGCTCGTCCGAGGCGGCTGTCGGCGTCGCCTCTGCCTGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MGNCCGTKISSDAISRNASGSRRRRSGSRRKGTGLSSRVSSSVAAVTPRSEGEILRCANVRSFAFNELKTATRNFRPDSVLGEGGFGSVFKGWVDENTFLPSRPGTGMVIAVKKLNQDGFQGHREWLAEVNYLGQLSHPNLVKLVGYCLQDEQRLLVYEFMPRGSLENHLFRRGSHFQPLSWNLRMKVALGAAKGLAFLHSDKAKVIYRDFKTSNVLLDSNYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLSAKSDVYSFGVVMVEMLSGRRALDKNRPAGEHNLVEWARPYLSSRRRIFRILDARLAGQYSLAGAHKAAALALQCLSADARNRPTMHQVVAALEQLQETTTTSHHHRSPQSRMLLGGRGFNASGRSSAGAGARPRRLSASPLPA</aaseq>

Gene Sequence

<dnaseqindica>1..58#565..887#968..1103#1256..1398#1538..1661#2681..3123#ATGGGCAATTGCTGCGGAACCAAGATTAGCTCCGACGCCATCTCCCGGAACGCATCTGGTAATCTAGCTTCTTCAATTTCTCTCGTATATATTTCACCATCTAGCTAGCTGCATAGGACGTACTAGGAGTAGATAGATTCTTGATTCAAGTAAAAAAGTAACCGCTGAGTAGTGAGGCATGTATGATTAGGAATGGAGATGTTCGTTTGTGCCTGCCTGCAATTTGTTGATCATTCCTAATTGCTTGAGTTTGTTGAAATCGATCCTAGTAGGTTAGGTAGATCATGCCGTTTCCAGTTCCAGTTGAACTGAAATAAGCGATCGGTTTCAGACAGAGACAGGACGACGCCTGCACATACTAGTAGTATATCATCTTGTACTAATCCTTGATGGACTAGTATAGTATGAAATCATTCACTTTTGTAACTAAATATTATGGTCATCTCAATCAATCTGAGAAAGAAGTTGTTATATAGATGAGGCTTCTGCATTGTGCGGTGGCGTTAACTGGTTGGTAAATTGACAATGCATGCGTATGATATGAGCTCAGTAATTGGTGGTCAGGTTCAAGAAGAAGAAGATCAGGAAGCAGGAGGAAGGGGACGGGGCTGAGCAGCCGGGTGTCGTCGTCGGTGGCGGCGGTGACCCCACGGAGCGAGGGCGAGATCCTGCGGTGTGCCAACGTGAGGAGCTTCGCGTTCAACGAGCTCAAGACGGCGACGAGGAACTTCCGGCCCGACAGCGTGCTCGGCGAGGGAGGCTTCGGCTCCGTCTTCAAGGGTTGGGTGGACGAGAACACCTTCCTCCCCAGCAGGCCCGGCACCGGCATGGTCATCGCCGTCAAGAAGCTCAACCAGGACGGCTTCCAGGGCCACAGGGAATGGCTGGTATGGATTTTCTTTCTTTCTGCATAACTCTTGATTGATATACTACTGTAGTATATAATAACTTGCATTTTAATTTGCAGGCCGAAGTGAACTACCTTGGGCAACTGTCACACCCAAATCTTGTAAAGCTTGTAGGCTACTGCCTTCAAGATGAGCAGAGGCTTCTTGTCTACGAGTTCATGCCTCGGGGAAGCTTGGAGAATCATCTTTTCAGGAGTAAGCCGCGCCTCCTCTCAACTGCCCTTTTCTTTTTCTTTTAATTTACTATTACTAGTATATATATTCGGGATGATTTTGATTTTTCTCAACCGAGAAGTCTGAAACGGATGGTGGTGTTGACAAGTTTTGGACGGCCTTGCACAATGCAGGGGGCTCACATTTTCAGCCTCTCTCCTGGAATCTTCGAATGAAAGTTGCCCTTGGAGCAGCAAAGGGACTTGCCTTTCTCCACAGCGACAAGGCCAAAGTTATCTACCGTGATTTCAAGACTTCCAATGTTCTTCTCGATTCGGTACGCTACTATCAATATACGTTCGTCGTTTTATCCTCATCTCACAAGCATTAATTAATTGTCAGTTGTTAAATTGCTGATCAATATATGATAATTCGATTCGGTGCCTCAACTCTACTCTCTTGTTCGTCACTGACAGAACTACAATGCAAAGCTGTCTGATTTCGGGTTGGCAAAGGATGGGCCAACTGGTGACAAGAGCCATGTCTCAACAAGAGTTATGGGCACATACGGATATGCTGCTCCTGAATATCTTGCGACAGGTAAGCATTCAGACCTGCGCTGCAAATTTTCAATTTGATTCTTGTTTTGCTCAAACCTTTTCCTACAACTATTTATAGAATTTCAGTTGTTACTAGTAGAAGTATATGTTAAAGATCAGACTTTATATATGTAATGATAATGAAAGGTCAGATGCATTTTAGCAAGACAATCTCTGCATTTGCCAGGGTTGCTAGCTGTTGTTGTTAGGCTATCTCTAACAATGAAACCCAAAATACAAGACCCATTTCATATTTGCATAGCGCTACAGTCAAATAGTTCAATACCTATTTTTGGTCTTCTCCAACAATAAGACCTAAAAGAGAACCCTTACTGTAAATAGGTCTTCAGGAGAGAGGATACTCAGATTTAGGTTATACTTCTTATAGCACGTAAAATGGGTCTTCTCTATAGGTACTCTGTTAGAGGCTAAAATAGTACTATCGAAGACTCATTTTGGGTTTAGGTGCTCTTATAGGTCACTTGTTGGAGACAGTCTTATGTATGCAGATGCAGTAGGTATGTGTAAGGATTAAAAGGTTATAGTGAAAGCTGGTCTGCTTGGCAGCTTGTGCTCGTCCTGAAGCACTAGACGAAGTAGTAAAGAATACTCATCCTCTCCTGTTGAAAGCTGAAGTCATATATAGAGTAGTTAGGTGCAGACAAGTCTGTCCAATTTTTTTGTCATGGTTTCAGACCGGCCTAACTGGCTTTGCTTAAATGTGGACTGGACCCCTTGAGCACATGTGCTAAACCAAATTAATTACACTTTCTTTAGTTAATTACTCACTCGATCATATATCCACAGAAATAAAAAATGCTGCACAATCTTGTACGTGCTACAGTACTACTACCTAGATATATACTATATACTAAGAAATTAAGAATGCCGAGAAAGACCTGTAGTCTCAGATGAGCTGTACTCTAATAGGTAGGTGTCGGTTAATCTGTAATGCATACAGCATCTAAACAGAAACGTAGCTCAGCTAATGATGATGCATCTGAATGTTGGATGGTGCAGGGCATCTGAGTGCGAAGAGCGACGTGTACAGCTTCGGGGTGGTGATGGTGGAGATGCTGTCGGGGCGGCGCGCGCTGGACAAGAACCGCCCCGCCGGCGAGCACAACCTGGTGGAGTGGGCTCGGCCCTACCTCAGCAGCAGGCGCCGGATCTTCCGCATCCTGGACGCCCGCCTCGCCGGCCAGTACTCGCTCGCCGGAGCCCACAAAGCGGCGGCGCTGGCGCTGCAGTGCCTCTCCGCCGACGCCAGGAACCGGCCCACCATGCACCAGGTGGTCGCCGCGCTGGAGCAGCTTCAGGAGACGACGACCACGTCTCATCATCATCGGTCGCCGCAGAGCAGGATGTTGCTCGGCGGCCGTGGCTTCAACGCCAGCGGCAGGTCGTCTGCTGGTGCTGGTGCTCGTCCGAGGCGGCTGTCGGCGTCGCCTCTGCCTGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000015