BGIOSGA000017

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Revision as of 09:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000017| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000017, complete gene.| tag = OS01G09...")
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Gene Name

BGIOSGA000017

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000017, complete gene.

LocusTag

OS01G0973200

Ensembl Transcript ID

BGIOSGA000017-TA

Ensembl Protein ID

BGIOSGA000017-PA

Length

2672

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:47025641..47028312

Sequence Coding Region

47028129..47028312,47027675..47027740,47027440..47027625,47026875..47026982,47026702..47026791
,47026469..47026591,47025746..47025960,47025641..47025667

Genome Context

<gbrowseImage1> name=IndicaChromosome01:47025641..47028312 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:47025641..47028312 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAGGCGGCGGCGGCGGAGGAGGAGGAGCCATCGAGTTGCGCAGGAGGATGGCGGCGCAGTGTTTGGCGTTCGAGCGGCAGATCGCCGACGGCCGCGAGCGCACCAAGGCAGCGGCCTCCGCATTCAGCGCCGCCCTCCTCTCCGCCCGCTCCCTCTCCAACCACACCATTTCCCAGCGAGAAAAATCCAACCAACTAAAGGATCAGCTGCGCAAACTTGAAGCAGATTTTGCACAAGCTCTGTCCAGTCATGGAAGGTCTGAGACCCTTCAAACTTCCTCTGCAGTCCAAGGTAGCAACAAGACAAAGTATGACCTTACTGGTCAATCCATTACGAACGCAATTGCAACTAATGATCAGCTCAGCTGTTTGGTCACTGATAAGAGGGCCAGTAGAGATGAATATGCAAATGTCATATCAAGTCAACTTGAAGCTATTGAAGCCCTTGAAGCTAAAACTGACGCAGCAGGGAAAAAGAACCTAGATGAAGCTTTTATGTGGTACAAAAAGTTTCTTGGTTTTCAAGTTGTTGGTGGTGAAGGGGTGAAATTTGTCTTCAGCAAAATTGACATTCAAAACCCTGACAATGAATATTCGTTTTGCATAAAGCTCAACAAAGATAGATACAACCTACTTCAATGTACTCCATTTCTGAAAGATTCTGAAGAATTGGTGAAGGATCTAAACTGCAGTAATGATCTATTCAAGTTTGTGAGAATCATGAGAGAGAGGTTCCAGGCTGCTGCAATCAACGGGTTTCTTCCTGCTAGCTCATTATGCCCAGACATGTCGTCATCCATAACAGATTCATCACCACCGGCTTTATCAATTGATACTGGACGTGAAAGTACCACTACCACCAGCCAAAGTCACTCTCGAAGTCGGGCGAAAAATCAAGATAATCCTACTAAAAGAGGAGCCCGTCCTAGTAATTTGCTATCTAGCACTCGTCGATCTCCACGTGTTGCGGCTGCAGATGCAACTAATAGGTACTAG</cdnaseq>

Protein Sequence

<aaseq>MEGGGGGGGGAIELRRRMAAQCLAFERQIADGRERTKAAASAFSAALLSARSLSNHTISQREKSNQLKDQLRKLEADFAQALSSHGRSETLQTSSAVQGSNKTKYDLTGQSITNAIATNDQLSCLVTDKRASRDEYANVISSQLEAIEALEAKTDAAGKKNLDEAFMWYKKFLGFQVVGGEGVKFVFSKIDIQNPDNEYSFCIKLNKDRYNLLQCTPFLKDSEELVKDLNCSNDLFKFVRIMRERFQAAAINGFLPASSLCPDMSSSITDSSPPALSIDTGRESTTTTSQSHSRSRAKNQDNPTKRGARPSNLLSSTRRSPRVAAADATNRY</aaseq>

Gene Sequence

<dnaseqindica>1..184#573..638#688..873#1331..1438#1522..1611#1722..1844#2353..2567#2646..2672#ATGGAAGGCGGCGGCGGCGGAGGAGGAGGAGCCATCGAGTTGCGCAGGAGGATGGCGGCGCAGTGTTTGGCGTTCGAGCGGCAGATCGCCGACGGCCGCGAGCGCACCAAGGCAGCGGCCTCCGCATTCAGCGCCGCCCTCCTCTCCGCCCGCTCCCTCTCCAACCACACCATTTCCCAGCGAGGTATCGGCCCTTCTTCCTTACTGGAGTAGGACTATATCACTACGGATGGACTGGATCTGGTTTACTCTCGTCTCATCTAAAATCTCACACTAGACAATGTTAGGTTTAGGTTTTCTGTGGGATCCGCGCAAGCAATTTCTCTGTCCTGCTTTTTTTCCATTTCGGAGATTCGACTCTTTCCAAATGTCGCATACTTAATCCCTGCTTCTGCACGCATAAATAAGCCAAGCGTGTGGCCTATGGTTAATTGTTCCCTTCTTGCATTCCTGCAACTAATTTATCGTTGACTGTGCACTGCGATTTGTGAATTGTGAGTACAAATTCTGTTTCACGGTAATAAAAAAAAAGATGGGGAACTGACTTGGGCTTGTGCCTTTCTGGATGACAGAAAAATCCAACCAACTAAAGGATCAGCTGCGCAAACTTGAAGCAGATTTTGCACAAGCTCTGTCCAGTAAGTACAACCTTTTCTTCACTATCTAGTGTTTTGGGATATTCTTCAGGTCATGGAAGGTCTGAGACCCTTCAAACTTCCTCTGCAGTCCAAGGTAGCAACAAGACAAAGTATGACCTTACTGGTCAATCCATTACGAACGCAATTGCAACTAATGATCAGCTCAGCTGTTTGGTCACTGATAAGAGGGCCAGTAGAGATGAATATGCAAATGTCATATCAAGTCAACTTGAAGGTAACATAAGTTTGCGGTTCTAGTACAGGAATTTGGAGTGAGATAGATACCTTTATGACTTACGGTTCACTCAATTTGTTTGATAGGATATTTAGGCTTCACTTCCGTTGGGCACAAGTCGTTTCAGAATCACAGCCTTTAATGCATCATTTGTGGGGTTTTATTTTATTAAGGAACTCCAGTTTTGGTGCATTGGCTCAGCTATTGCTTGGTCTCTAAGTGCTTTACTCTGCATTACAAATAAAAAGGCCAGATTGAGAATTGATTGGAGCTCTTAGGTCCAATGTATCGTATTTTCAGATCCTTTTCTAATGATATGGGTTTATCTTTTGCTATGTATGCATTTCTAGCTGTGTCTATGCCAATTTGGTTCTTTTGTTTCAATATTTTCCATTGGCCATACAGAAACTAAAATATATAGGCCATAAGCCCTTAATGTCTCTTCATTTGATGGCAGCTATTGAAGCCCTTGAAGCTAAAACTGACGCAGCAGGGAAAAAGAACCTAGATGAAGCTTTTATGTGGTACAAAAAGTTTCTTGGTTTTCAAGTTGTTGGTGGTGAAGGTAATGGAAGTTTTAGTGATATTGCCAATTAAATTAGCTCAGTGTTATCTCTGCTGACAAAGTTACAATTACCGTTTTGCAAGGGGTGAAATTTGTCTTCAGCAAAATTGACATTCAAAACCCTGACAATGAATATTCGTTTTGCATAAAGCTCAACAAAGATAGATACAACCGTGAGTTACAACTGTCTAATATCCATGCAATTATACTGCCTAAGTCATATTATTATATTCTTTGGTGAAAGTGTTGTTGTTAATGATGCCTTCTTTTGTGTTGATAACAGTACTTCAATGTACTCCATTTCTGAAAGATTCTGAAGAATTGGTGAAGGATCTAAACTGCAGTAATGATCTATTCAAGTTTGTGAGAATCATGAGAGAGAGGTTCCAGGCTGCTGCAATCAACGGTACTCCATTTTGCATGTTTTCATTATAAATCTGCGTTGAGTTCCTTTTCCCCAGAACACATGATCAGTGCATGTGTTTACCAAGATTACCGCCTCTCTCTTAAAAACACTACCACAAGCCCTACTGAAATTCATCCTGAAAAGGATATGGGTATCATATCTCTTTCTAGAGAAATGAACCCCTTATCCCTATATCCATGAGGCCACGATAAACCTCTTAACTTCAAGAAATTTTGAAGAGTTAAATGCAGGGAGCCCAACAAAATACAGACTTACAGAGGTTCCATACAGGAAGATAAACAATTAATTCTCCATTTCCCAAAGTCAAATGGACACTGACCTGACAACAAGATCGATATTAATGGTCATTGCATGATGAGAGGTTGTCTAGCTTTCCAGGTTTTTGGAGTTAAAACAGAATTCTTTTCATGGTTCCATTGAAAAGCTGTAAGATGTCACTGAACCGGTTGTCCCATTTTCATCTTACTGTTGTTGTTGTTGTCTACAGGGTTTCTTCCTGCTAGCTCATTATGCCCAGACATGTCGTCATCCATAACAGATTCATCACCACCGGCTTTATCAATTGATACTGGACGTGAAAGTACCACTACCACCAGCCAAAGTCACTCTCGAAGTCGGGCGAAAAATCAAGATAATCCTACTAAAAGAGGAGCCCGTCCTAGTAATTTGCTATCTAGCACTCGTCGATCTCCACGTGTTGCGGTAAGTGCATTGTATCATCCCCTCAGGCATAATTTTAGCTGGTTATTGATATTTACCTGGTGCCTTTTTTGTTCTCAGGCTGCAGATGCAACTAATAGGTACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000017