BGIOSGA000029

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Revision as of 09:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000029| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000029, complete gene.| tag = P0518C0...")
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Gene Name

BGIOSGA000029

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000029, complete gene.

LocusTag

P0518C01.4-1

Ensembl Transcript ID

BGIOSGA000029-TA

Ensembl Protein ID

BGIOSGA000029-PA

Length

2254

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46861274..46863527

Sequence Coding Region

46863330..46863527,46863112..46863169,46862814..46862881,46862197..46862376,46861949..46862045
,46861756..46861862,46861523..46861656,46861274..46861415

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46861274..46863527 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46861274..46863527 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCGGCGGCGGCGGCTGCTTCTGCTCCCCGCCTCCTCCTGCCGCCGGCCGCCTCCACCTTCCCACACCAGCACGAGCACGTCCGCCGCAACTGGCACCGGCCCCGCCGCCAGGTCATCTCTGCCCGCGCCGGCGCCTCCGTCGCCGCCCGGGGCCTTGATGCAGACGACTTCCGCCATCCGCTGGACAAGCAGAACACACTGCTGCTGAGAGCAGTTCCAGGGCTTAATGATATGGGCAAGGCTTTGCTAGGACCAGTTTCTGAGCAAGTTATGGTACTTCAGAACATTGGATCGTCTGTGCTAGTCTCTGAAAACCAGCTTTCAGATCTTCATCAGATCTTGACCGAGGCAGCAAAACTATTGAACACAGACGCTCCTGACTTGTACATTCGGCAGAACCCTGTTCCTAATGCTTACACCTTAGCGATCAGTGGCAAAAAGCCATTCATAGTTGTTCATACAAGCCTTGTGGAGCTGCTCACTAGAAAAGAACTGCAGGCTGTGTTGGCTCATGAACTGGGACACCTCAAGTGTGACCATGGCGTGTGGCTTACATTTGCCAACATACTGACAATGGGAGCATACTCTGTCCCTGGATTTGGCATGGTTGCTGGGTTTCTGGAAGAGCAGCTCTACAGGTGGCTCCGGGCTGCAGAGCTGACTTGTGATCGAGCGGCTCTTCTTGTAGTGCAGGACCCCAAGGTTGTGATATCTGTGCTGATGAAACTGGCCGGAGGGTGCCCGTCGCTTGCGGACCAGCTGAACGTGGACGCCTTCCTGGAGCAAGCTCGCTCCTACGACAAAGCTGCGTCAAACCCCGTCGGCTGGTACATCCGGAACGCTCAGACGAGAGAGCTGTCGCATCCTCTGCCGGTGATGCGAGCCCGCGAGATCGACGAGTGGTCCAGGAGCCGAGAGTACAAGACGGTGCAGCAGAAGGTCATTCAGCTCCAGCTCAATGATCACGATGCAAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAASAPRLLLPPAASTFPHQHEHVRRNWHRPRRQVISARAGASVAARGLDADDFRHPLDKQNTLLLRAVPGLNDMGKALLGPVSEQVMVLQNIGSSVLVSENQLSDLHQILTEAAKLLNTDAPDLYIRQNPVPNAYTLAISGKKPFIVVHTSLVELLTRKELQAVLAHELGHLKCDHGVWLTFANILTMGAYSVPGFGMVAGFLEEQLYRWLRAAELTCDRAALLVVQDPKVVISVLMKLAGGCPSLADQLNVDAFLEQARSYDKAASNPVGWYIRNAQTRELSHPLPVMRAREIDEWSRSREYKTVQQKVIQLQLNDHDAS</aaseq>

Gene Sequence

<dnaseqindica>1..198#359..416#647..714#1152..1331#1483..1579#1666..1772#1872..2005#2113..2254#ATGGCTGCGGCGGCGGCGGCTGCTTCTGCTCCCCGCCTCCTCCTGCCGCCGGCCGCCTCCACCTTCCCACACCAGCACGAGCACGTCCGCCGCAACTGGCACCGGCCCCGCCGCCAGGTCATCTCTGCCCGCGCCGGCGCCTCCGTCGCCGCCCGGGGCCTTGATGCAGACGACTTCCGCCATCCGCTGGACAAGCAGGTGAATTCCCAATTAATTTGCTACTGCCTGCTTCCACTGCTGCAGTGCTTATGATATATCATGCCTACTGTAGTATATATGTAATGTAATACAAGGATTAAGTATGTCCTTCCTGAATGATGATGGATGATTGCTGAGTTTCTCCTTCCTTGGCCTGCAGAACACACTGCTGCTGAGAGCAGTTCCAGGGCTTAATGATATGGGCAAGGCTTTGCTAGGTCACCACCACTTACTCAATAATTCCCCTCTCTTCTTTTCAGCTTTAGTCCCATCCTTAGGTTACCCTTATCAATTACTATTATCATCCTTCACTGATCAATTCCCCTTTTTGTAACTCTTTTAACTTAGCTGAATTAATATTTGCTTCACAGTGTTATTTACTGCTCCATACTGTGCCTTTCTCTTGCTGTTAATCTTTTTTTTTCTTTTTACCTAAATGCTAATGCAGGACCAGTTTCTGAGCAAGTTATGGTACTTCAGAACATTGGATCGTCTGTGCTAGTCTCTGAAAACCAGGTGCGCTTTTCATGTTAATCATTTTTAAGCCATTTTCAATTTCTTAACTTATTATTGCAATAACAGATAACCTCATTGAAAGGGGAAAATAGTTCATCAAAGATAAAAAAAAAGGACAAACCAGTAGTACCGATAGAAAGCCATGAGGCTTAACTTTTCCATGTAAATCATAATATTACTTCCACTATGAATATGGAGTTATTCTAGCAAAAGAGAGGCAGAAGCACGCATAAGACATGCAGACAAATCCATGGATATATTATAAATTACTTTTGTTGGGAAAAAAAAACTTTTTGTAGAACATTGCACAAACAATGAGCATAAGTAACGCTGATATCCAACCATACACTGGTTCTACCATTTCATGTCTTTTATATATCTTATGATTTCTTTTCTTACTCCATTGCGGCATTTACACTTTTGTTTCTTTTCCTCAGCTTTCAGATCTTCATCAGATCTTGACCGAGGCAGCAAAACTATTGAACACAGACGCTCCTGACTTGTACATTCGGCAGAACCCTGTTCCTAATGCTTACACCTTAGCGATCAGTGGCAAAAAGCCATTCATAGTTGTTCATACAAGCCTTGTGGAGCTGCTCACTAGAAAAGAACTGCAGGTAGATACATGACTGTGATCATCAGTAGCTGTGTGTTTATTTATCAGTTAACCCGCTCTCTTCAGTCTTTGCATTGTAAACCATGAAGATATCATATCAGACTATGGTGTTAGTAGTAACTCATGGTGTGAAGATTTGTGTGTTTGGCTAGGCTGTGTTGGCTCATGAACTGGGACACCTCAAGTGTGACCATGGCGTGTGGCTTACATTTGCCAACATACTGACAATGGGAGCATACTCTGTCCCTGGTAAGCTGATCTCCATCTGAATAACTAACCTTAAATTGGGAGTACACTAGTATTAATCCATCAGATGCATGTATTGATCTTACCAGGATTTGGCATGGTTGCTGGGTTTCTGGAAGAGCAGCTCTACAGGTGGCTCCGGGCTGCAGAGCTGACTTGTGATCGAGCGGCTCTTCTTGTAGTGCAGGACCCCAAGGTAATCAAAATCTGAATTGGATTTGTAGCAGTGTACTAGTACTTACTACTCGGTGATGATTAATGTGACTGAACGGGCGTGTTGATTGATTGTCAAGAGGTTGTGATATCTGTGCTGATGAAACTGGCCGGAGGGTGCCCGTCGCTTGCGGACCAGCTGAACGTGGACGCCTTCCTGGAGCAAGCTCGCTCCTACGACAAAGCTGCGTCAAACCCCGTCGGCTGGTACATCCGGTCAGCCAAACAAACATCTTCTTACTCCAGCTGCTGCTTTAACTTGCTGCTACTGCTTGGTGAGATTAATTTGGTGTTTGTCATATGCATATGTGTGTGTGGTGCAGGAACGCTCAGACGAGAGAGCTGTCGCATCCTCTGCCGGTGATGCGAGCCCGCGAGATCGACGAGTGGTCCAGGAGCCGAGAGTACAAGACGGTGCAGCAGAAGGTCATTCAGCTCCAGCTCAATGATCACGATGCAAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000029