BGIOSGA000030

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Revision as of 09:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000030| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000030, complete gene.| tag = OsI_053...")
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Gene Name

BGIOSGA000030

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000030, complete gene.

LocusTag

OsI_05378

Ensembl Transcript ID

BGIOSGA000030-TA

Ensembl Protein ID

BGIOSGA000030-PA

Length

3404

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46856324..46859727

Sequence Coding Region

46859564..46859727,46859429..46859492,46859183..46859296,46858990..46859085,46858596..46858700
,46858395..46858424,46858091..46858159,46857619..46857708,46856710..46856850
,46856324..46856608

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46856324..46859727 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46856324..46859727 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGTTCTCCGGCTGCGCTTCGCCACTCTCCACCACCCTACGCTCTGGCCTCGCCCCGTTCACGCTGCGCCACCGACTCCGACTCCGTCGACTCCGCGCCTCCGACGACAACCTCCGAGAGGTCTGCGCCGGGCGCGTCCCGGAGCACGTCCTCCAGAGGGCTGAGGAGGTTGGCTATGTCGTCCCTACCGAGGGTGCAGGAGCAATCCTTGCCTGTCCTCTTACGGGTTCTGGAAAGACACTTGCCTATCTATTGTCGGTGTTCTCGGCCATAGATTTTGGGAGATCCTCGGTGCAAGCGCTGGTTGTGGTCCCAACCAGGGAGCTCGGCATGCAGGTTACCAAAGTTGCTCGAATACTTGCAGCAAAGGCCTGCACCGTTATGGCTTTGCTTGATGGTGGAATGCTAAGGAGGCAAAAGAGTTGGGTAAAGGCAGAGCCCCCGGCTATAATTGTTGCTACTGTTGCAAGCTTGTGCCAAATGATTGAGAAGCGTGCTTTCAGTCTTCAGTCTATGAGAGTATTAGTTATTGATGAGGTTGATTTTATTTTTGGGTCGTCAAAGCAAACTGATGTGGTTCATGTTCATGTCAACCCTGTACAACCCATGCCCTCTCACCTCCAGCACAAATATGCGATCTGCAGTAAGAAGGAAAGGTTGCATGTTTTACTATCCTTGCTTGAGAAGGATGCACCAAAGTCAGGGATTATATTTGTTGCTGAACAGTCTGAGAAATCAAAGAAGGCTGGACACCCTCCTTCAACTACTGTTGTTGTTGAATTCCTGAGAACTACGTACATGGGAAGCCTAGAGGTCCTTCTACTGGAAGAAGATATGAATTTCAATGCCCGTGCTACATCATTCACCGAGGTCAAGGGAAAAGGCTTTCTTCTAGTTTCCACTGACATAGCAAGCAGAGGGTTTGACCTCCCACAAACCAGCCACATATACAACTTTGACCTTCCCAAGACGGCTATTGACTATCTGCATCGTGCTGGAAGAACTGGGAGAGAACCATTCTCCAAGTTAGCTTGCAGCGTGACAACCCTCATAACAGAGGATGAGCACTTTGTATTACAGAGATTTCAGAATGAACTCAAGTTCCATTGTGAAGAGCTACCTGTAGAATCCATGTTCGCATTTAACTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAFSGCASPLSTTLRSGLAPFTLRHRLRLRRLRASDDNLREVCAGRVPEHVLQRAEEVGYVVPTEGAGAILACPLTGSGKTLAYLLSVFSAIDFGRSSVQALVVVPTRELGMQVTKVARILAAKACTVMALLDGGMLRRQKSWVKAEPPAIIVATVASLCQMIEKRAFSLQSMRVLVIDEVDFIFGSSKQTDVVHVHVNPVQPMPSHLQHKYAICSKKERLHVLLSLLEKDAPKSGIIFVAEQSEKSKKAGHPPSTTVVVEFLRTTYMGSLEVLLLEEDMNFNARATSFTEVKGKGFLLVSTDIASRGFDLPQTSHIYNFDLPKTAIDYLHRAGRTGREPFSKLACSVTTLITEDEHFVLQRFQNELKFHCEELPVESMFAFNL</aaseq>

Gene Sequence

<dnaseqindica>1..164#236..299#432..545#643..738#1028..1132#1304..1333#1569..1637#2020..2109#2878..3018#3120..3404#ATGGCCGCGTTCTCCGGCTGCGCTTCGCCACTCTCCACCACCCTACGCTCTGGCCTCGCCCCGTTCACGCTGCGCCACCGACTCCGACTCCGTCGACTCCGCGCCTCCGACGACAACCTCCGAGAGGTCTGCGCCGGGCGCGTCCCGGAGCACGTCCTCCAGAGGTGCTTCCCTCTCTTCCTCGTTCGAGATTTTTTTTTAATTATTTATGCTCATGGGTTTAATTTTCTTCCAGGGCTGAGGAGGTTGGCTATGTCGTCCCTACCGAGGGTGCAGGAGCAATCCTTGCCTGTCCTCTTGTCTGGCCAAGACTGCATCCTCCACGCACAGGTGCTGTTCCTCCTCCTCCTCAAGCTTTGCTTACTCTCCTTAGATTGTTTCATGCTGTACAGTGATAGCAATCTGATCTTACTATTGCTGGTTGAATGTAGACGGGTTCTGGAAAGACACTTGCCTATCTATTGTCGGTGTTCTCGGCCATAGATTTTGGGAGATCCTCGGTGCAAGCGCTGGTTGTGGTCCCAACCAGGGAGCTCGGCATGCAGGTGATAAGCTGCTTGGCTGCTTGCTATGCAATTATCTTCCACCTGCCTTGTGCGTCCCTTCTAACTCACCTTGTTGCTGTTATTGTGCCAATGTAAGGTTACCAAAGTTGCTCGAATACTTGCAGCAAAGGCCTGCACCGTTATGGCTTTGCTTGATGGTGGAATGCTAAGGAGGCAAAAGAGTTGGGTAAAGGTATTTTCAGTCTATGCTCAATAGCTAATTCTTCAGTTCCTAGCCCAAAAAGAAAACTGTGATAGTGCTTCAGTTTAATACAGGAGCATTTTAGCCATGCCGTGGTTATGTCCATATCTCCCTTTGATATTAGTTTTCAGGCCTCTTGGTGTAAATGTTGCCAAATTGGTTATACTGATGTACGCACTTCACTTTCTTTTTGTTTCTACTTGACGCATAAAGAGCAGGCTATTTAAATTTCTCTTACCTGTTGTTTGCTTCCCCGCTGACTATATTGATCTATTTCCAGGCAGAGCCCCCGGCTATAATTGTTGCTACTGTTGCAAGCTTGTGCCAAATGATTGAGAAGCGTGCTTTCAGTCTTCAGTCTATGAGAGTATTAGTTATTGATGAGGTGATTCTTGAGTCCTAAATCAAACTTTTTTGCAGTATAAGCTCAGTCTGCTAATGCAATATCTGACTCTGTATATTTGCAAAGAGCCCAAGAGGCTATTTGAAGTTTGGAACTCATTTAGTTGATTTTTTTCAAGACAGAATACCTAATGTACTCATTGCTGTTTGATAGGTTGATTTTATTTTTGGGTCGTCAAAGCAAGTAAGCTCTCTTCGCAAAATATTAACATCTTATTCAGCAGCTTCCAGTCGTCAGACCATATTTGCTAGCGCATCGATTCCTCAGCACAATCGCTTTGTGCATGACTGTGTGCAACATAAGTGGACTAAGGTTGCACTTCTTTATCTATATGGCTTGAACGTACACTATTATTATTGAATGAAAAGATGGACCTTTTTGACCTCATGTTTGCATATTCTGTCTTATCTGTGTGCAGACTGATGTGGTTCATGTTCATGTCAACCCTGTACAACCCATGCCCTCTCACCTCCAGCACAAATATGCGGTGGGCATATAAATTTCTTTTTATGATAATCTTACATTCTAAATGCCTTCAATCATTTCCTACAACTGTGGAACTTAATACCTGTCTTGAACATAGTAAATAGGCGTGTTTCAGTTGGGGCCTAAAACCTAAACCCACAGGCACGGGCATTCCTTGCATAAGCTCATTAAACAGCATGCATGTGATTATGGCAAAAGTTTAGTCCTTTTACAAAGCATTGCACATCTTCTTTTAGTTTTCAGTGATCTCATGAGTCTCTTTTACTTTTCTGTTCCTGAAAAATCTTGCGAGTATGGGTGACTAACCCCCTTGCTCCTGAAAAATATCTTTTGACCTGATTTTTGTTCTTGCTGATTATGGTAATTTTTTAATTAATGTACAGATCTGCAGTAAGAAGGAAAGGTTGCATGTTTTACTATCCTTGCTTGAGAAGGATGCACCAAAGTCAGGGATTATATTTGTTGCTGAACAGGTATTGCTACTTGTGGATTCCATTTACTCCATGGCATGTTGATTATAGTGTTGCTCCAGGGTGATGGGATGTGCCAATTTAGGGGTTAGAAATTATTCTAGAGGGACCAACCGGCCAAGGGACCTCATGATGGACCATTTATGCTATCCTATATGCAAATACAAAATGTTACTTATCATAGATAGTCTTTATCTGCTGGTATGGAATAATTTTCATTTTTGGTACGATTGAAGATTTAATATCTGATTCTGTTTCAATGGGAATCACAGCTAGTCCATTAGCTGATATTCTTCATTTTTATCGTTCCTATGACTAGCAACAAAACATTTAAGCAAGACTTTAAAAAAAAATCAAAATGTCCTTTATCATTGTATACCGAAAATGCCGGGGCGATGGAACCTATTAGCATGTGTTCGTGTAGGGGTACCGTAGACTCCAGCATATAAGGGTATTCTGTACTAGCGTGGTGCTAATGTGCTATGATTAATTACCAGCTCCAGAGCATAATATATATACATTAATAGTTTCTTGAAAACAGTTCTATATTTCATTTACATTAGTTCCAATTTTTAGAACCGTATATTCAGCATTCACAGACATGTGTAAGTACTAGCAATTTGGTTTGTTTACTAACTGGGCAGTATCATATGTTTTTCACCAAGGTCTGAGCGATTCTTCTAGAACGAATGAATATTTACTTAACCAGAATAGTAGTGTGGCAACCTCACGTTGCAGTTTGTTTGTTAACTGTTCAACCTGTTCTGTTAGTCTGAGAAATCAAAGAAGGCTGGACACCCTCCTTCAACTACTGTTGTTGTTGAATTCCTGAGAACTACGTACATGGGAAGCCTAGAGGTCCTTCTACTGGAAGAAGATATGAATTTCAATGCCCGTGCTACATCATTCACCGTTCGTGTTCTCTTTCTATTCTTTCTGACGTTCCCACTATAAAGACATGTTTGATTTTGAAAAATCCATATCTTCACACAAGTATCGATGTTCCTCTGCAGGAGGTCAAGGGAAAAGGCTTTCTTCTAGTTTCCACTGACATAGCAAGCAGAGGGTTTGACCTCCCACAAACCAGCCACATATACAACTTTGACCTTCCCAAGACGGCTATTGACTATCTGCATCGTGCTGGAAGAACTGGGAGAGAACCATTCTCCAAGTTAGCTTGCAGCGTGACAACCCTCATAACAGAGGATGAGCACTTTGTATTACAGAGATTTCAGAATGAACTCAAGTTCCATTGTGAAGAGCTACCTGTAGAATCCATGTTCGCATTTAACTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000030

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000030&oldid=37754"