BGIOSGA000054

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Revision as of 09:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000054| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000054, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA000054

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000054, complete gene.

LocusTag

OSJNBB0035J08.15

Ensembl Transcript ID

BGIOSGA000054-TA

Ensembl Protein ID

BGIOSGA000054-PA

Length

1594

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46561808..46563401

Sequence Coding Region

46563342..46563401,46562862..46563255,46562031..46562644,46561808..46561873

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46561808..46563401 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46561808..46563401 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGACGGTGAGGATATCCAGCCTCTTGTCTGTGACAATGGCACTGGAATGGTCAAGGCTGGGTTTGCTGGAGATGATGCACCAAGGGCTGTTTTTCCTAGCATTGTTGGTCGTCCTCGCCACACTGGTGTCATGGTAGGGATGGGGCAGAAGGATGCATATGTTGGTGACGAAGCACAGTCCAAGAGAGGTATTCTCACGTTGAAGTACCCAATTGAGCATGGTATTGTAAGCAACTGGGATGACATGGAGAAGATCTGGCATCACACTTTCTATAATGAGCTTCGTGTTGCACCTGAGGAGCACCCTGTGTTGCTCACTGAAGCTCCCTTGAACCCCAAAGCCAACAGGGAGAAAATGACACAGATTATGTTTGAGACGTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTGCTTTCACTCTATGCTAGTGGCCGAACAACAGGTATTGTTCTGGACTCGGGTGATGGTGTGAGCCATACTGTTCCCATCTATGAAGGATATGCACTTCCTCATGCAATCCTTCGTCTGGATCTTGCTGGCCGTGACCTCACGGATTCTCTTATGAAGATCCTCACTGAAAGGGGTTACTCGTTCACAACCTCTGCCGAGCGGGAAATTGTGAGGGACATCAAGGAAAAGCTTGCATATGTTGCACTTGATTATGAGCAAGAGCTGGAAACTGCCAAGAACAGCTCTTCAATTGAGAAGAGCTATGAGCTGCCTGATGGCCAGGTGATTACCATTGGCTCAGAGAGGTTTAGGTGCCCTGAGGTCCTCTTCCAACCATCCATGATTGGTATGGAGTCCGCTGGAATCCATGAAACAACCTACAATTCCATCATGAAGTGCGACGTAGATATCAGGAAGGACCTGTATGGCAACGTAGTGCTGAGTGGAGGCACAACAATGTTCCCTGGCATCGCCGACCGTATGAGCAAGGAGATCACTGCCCTTGCTCCAAGCAGCATGAAGATCAAGGTTGTCGCTCCACCTGAACGCAAGTACAGTGTCTGGATAGGAGGGTCTATCCTGGCTTCTCTCAGCACCTTCCAGCAGATGTGGATATCGAAGGATGAGTATGATGAATCTGGCCCAGCAATTGTTCACAGGAAGTGCTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETAKNSSSIEKSYELPDGQVITIGSERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF</aaseq>

Gene Sequence

<dnaseqindica>1..60#147..540#758..1371#1529..1594#ATGGCTGACGGTGAGGATATCCAGCCTCTTGTCTGTGACAATGGCACTGGAATGGTCAAGGTCAGGAACTTCATCTTTTAAACCATCTATCATCTCCAAGACTCCAACTGCATTTTTACCAATTTGAATTCCTTAAAATTTTGCAGGCTGGGTTTGCTGGAGATGATGCACCAAGGGCTGTTTTTCCTAGCATTGTTGGTCGTCCTCGCCACACTGGTGTCATGGTAGGGATGGGGCAGAAGGATGCATATGTTGGTGACGAAGCACAGTCCAAGAGAGGTATTCTCACGTTGAAGTACCCAATTGAGCATGGTATTGTAAGCAACTGGGATGACATGGAGAAGATCTGGCATCACACTTTCTATAATGAGCTTCGTGTTGCACCTGAGGAGCACCCTGTGTTGCTCACTGAAGCTCCCTTGAACCCCAAAGCCAACAGGGAGAAAATGACACAGATTATGTTTGAGACGTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTGCTTTCACTCTATGCTAGTGGCCGAACAACAGGTATGTGATGTTTTACTTAACTTCTTTCTTTCCAATTTCTTGGTTCTTTTGCATCTATAGATTCATTTAGATGAGAGCTCGGATGATTAAGAACTATTCTTATACATTTTTAATGTTGGTCAGTAGGTGTTAGAATTATATTATCTATGCTCAATAATAGTCGTGCAATTATTTAATGTTGGTCAGTGCATATGGCTAATGCTGTTTTAATCAACAGGTATTGTTCTGGACTCGGGTGATGGTGTGAGCCATACTGTTCCCATCTATGAAGGATATGCACTTCCTCATGCAATCCTTCGTCTGGATCTTGCTGGCCGTGACCTCACGGATTCTCTTATGAAGATCCTCACTGAAAGGGGTTACTCGTTCACAACCTCTGCCGAGCGGGAAATTGTGAGGGACATCAAGGAAAAGCTTGCATATGTTGCACTTGATTATGAGCAAGAGCTGGAAACTGCCAAGAACAGCTCTTCAATTGAGAAGAGCTATGAGCTGCCTGATGGCCAGGTGATTACCATTGGCTCAGAGAGGTTTAGGTGCCCTGAGGTCCTCTTCCAACCATCCATGATTGGTATGGAGTCCGCTGGAATCCATGAAACAACCTACAATTCCATCATGAAGTGCGACGTAGATATCAGGAAGGACCTGTATGGCAACGTAGTGCTGAGTGGAGGCACAACAATGTTCCCTGGCATCGCCGACCGTATGAGCAAGGAGATCACTGCCCTTGCTCCAAGCAGCATGAAGATCAAGGTTGTCGCTCCACCTGAACGCAAGTACAGTGTCTGGATAGGAGGGTCTATCCTGGCTTCTCTCAGCACCTTCCAGCAGGTAAGTCCTTATCATTACAGCTTCTTAGATGCTCACCAGAATTAGTTCATAACTACTTCATAACCAATCCATTTTGTTTATTTGTCCACACCAAGTTGTATTTTAATGGTTTTGCTAATGCACATGTGATTTGTTTGCTTGGCATTGATAAAAACAGATGTGGATATCGAAGGATGAGTATGATGAATCTGGCCCAGCAATTGTTCACAGGAAGTGCTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000054