BGIOSGA000060

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Revision as of 09:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000060| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000060, complete gene.| tag = P0483G1...")
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Gene Name

BGIOSGA000060

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000060, complete gene.

LocusTag

P0483G10.27

Ensembl Transcript ID

BGIOSGA000060-TA

Ensembl Protein ID

BGIOSGA000060-PA

Length

1848

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46499770..46501617

Sequence Coding Region

46501615..46501617,46501460..46501508,46500827..46501109,46500195..46500330,46499770..46499838

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46499770..46501617 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46499770..46501617 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATCATCTCCAAGAAGAACCGCCGCGAGATCTGCAAGTACCTCTTCCATGAGGGAGTCTTGTATGCCAAGAAGGACTACAACCTGGCCAAGCACCCAAAGGTTGATGTGCCCAACTTGGAGGTGATTAAGCTCATGCAGAGCTTCAAGTCAAAGGAGTATGTGAGGGAGACCTTCTCGTGGCAGCACTACTACTGGTACCTGACCAATGATGGCATTGAGCACCTCCGCAGCTACCTCAACCTGCCATCTGAGGTTGTGCCTAACACCCTCAAGAAGTCTGCCAAGCCCCCGTCTCGCCCATTCGGCTCTGGCCCTCCTGGTGACCGCCCCAGAGGCCCGCCTCGCTTTGAGGGTGACAGGCCCAGGTTTGGTGACAGGGATGGTTACAGGGGTGGCCCACGTGGTGCTCCAGGTGATTTTGGTGGCGAGAAGGGTGGTGCTCCAGCTGAGTTCCAGCCATCTTTTAGGGGTAGCAGACCTGGCTTTGGTCGTGGCGGTGGTGGCGCATTCGGTGGTGGCGCATCTTCCATGGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MIISKKNRREICKYLFHEGVLYAKKDYNLAKHPKVDVPNLEVIKLMQSFKSKEYVRETFSWQHYYWYLTNDGIEHLRSYLNLPSEVVPNTLKKSAKPPSRPFGSGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRGSRPGFGRGGGGAFGGGASSME</aaseq>

Gene Sequence

<dnaseqindica>1..3#110..158#509..791#1288..1423#1780..1848#ATGGTGAGTAGCGACCTCCGAAACCGAGCCACATTCGTTTGCTCCGCTATGCTCTACCCGTTCCGTTGTCTGACGCGATGCCGCGCTTTGTTTTTTTTTTGTGTCGCAGATCATCTCCAAGAAGAACCGCCGCGAGATCTGCAAGTACCTCTTCCATGGTGAGATTCTCCCCCTTTCTTCTCCTCTATACGCCGACTCTGTACATTGTGTATGTGCTGATCGTGATTGCAAGCTTCGACTTGATGTGGTGTTGCAGTAGGGTTTAGGTGGTTGCATTCGCTTGATTCCAATAGGGCAGATTTTGATTGCATTGTCTGCAATTGTTCATTCACTATGGCTGTCTGAGGTTTATAGGTTTGACGAATTCAGTTACATTGCTCCCAGATTTACTCCAAATATTATGTTGAAACATGTTTTATTTGATTGGTCATGTATTTGCTGAAGGCCTGAATGATGGTACCTTTATTTGTTATGAGTTGAAGTGCTAATTTAATTCAACTATATGCAGAGGGAGTCTTGTATGCCAAGAAGGACTACAACCTGGCCAAGCACCCAAAGGTTGATGTGCCCAACTTGGAGGTGATTAAGCTCATGCAGAGCTTCAAGTCAAAGGAGTATGTGAGGGAGACCTTCTCGTGGCAGCACTACTACTGGTACCTGACCAATGATGGCATTGAGCACCTCCGCAGCTACCTCAACCTGCCATCTGAGGTTGTGCCTAACACCCTCAAGAAGTCTGCCAAGCCCCCGTCTCGCCCATTCGGCTCTGGCCCTCCTGGTGACCGCCCCAGGTGAGCATTTATTCCTTTTGGGTTTATCATCTGCATATGCGAATACGGAAATTGGATGCTATTGCTGTGATGGATATTCTTTAGGTGGTGGTCCTGTTTTCAAATATGCAAATTGTGTAGCGACCATGTACCACTCGTCGAATGGACCATCAGATTACCCCATAGGAACCTTGCCACAAGTCATCTAATTCAATTTGCAGATCCAACATGTTTTTGGGTACTAAATCGCACAGTGGGGCTGATTTGTGGCAACAAATTTAGATTCATTGATGTAATTAGTTGAAACCATTTAACTGTGTTGCAAGTCTTCTCCTCGAACTGAACAGAGACCTGTTCTTTTGGTTGGGATTTCAATTTTTTACACATACCGTATCTAATCTTCCTAACATGTACTCAAATGATATAATCTGGCTGCTTTTGTTTATGAATGTATTGCCTGAAAACTCTAGTGGAGTAGTGGAGTCACTGATATTATCCTTTTCTGTTCGTGTGGCAGAGGCCCGCCTCGCTTTGAGGGTGACAGGCCCAGGTTTGGTGACAGGGATGGTTACAGGGGTGGCCCACGTGGTGCTCCAGGTGATTTTGGTGGCGAGAAGGGTGGTGCTCCAGCTGAGTTCCAGCCATCTTTTAGGGTAAGAGCTCTAATGACCATCTGCATACCTATATGCCATTGCTAGGTTCATCCAGACTGCTCATAGATAATTTATTGGCTTAATAATTTGGAACATTTGAATGGGTTTAGACCATGCATTTTCTTCTGTTTGCCTTGAACTTTAGCACGTCATGTTTCCATCCTTGTATTTGTTCAAACTGTTGTGTCCTTGCTTGTATAGGTTGAGTATCCATCTTAGGCTGTGTTAATAGATTTTATGTTAGGACATGTAAACATATAGCATGTTCAGGAACCCTTGTGTTGACAGCAGTGATATTCATAAAAGTAGCTGCTTGTAGACTAACTTGATACCCCTTGTAAATCTTGGATGTTCAGGGTAGCAGACCTGGCTTTGGTCGTGGCGGTGGTGGCGCATTCGGTGGTGGCGCATCTTCCATGGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000060