BGIOSGA000069

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Revision as of 09:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000069| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000069, complete gene.| tag = OsI_052...")
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Gene Name

BGIOSGA000069

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000069, complete gene.

LocusTag

OsI_05299

Ensembl Transcript ID

BGIOSGA000069-TA

Ensembl Protein ID

BGIOSGA000069-PA

Length

2214

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46434226..46436439

Sequence Coding Region

46436173..46436439,46435840..46436025,46435570..46435671,46435434..46435490,46435240..46435335
,46435070..46435162,46434828..46434953,46434689..46434721,46434554..46434604
,46434340..46434418,46434226..46434239

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46434226..46436439 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46434226..46436439 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCAGGGAGCAAGAAGAATCCAGAACCTTCCTCTTCTTCTTCTTCAGGCGATCTCGGCGGCAAGACCGTACAAGAGCTCCTCGACATGGACAAGGATGCCGTCTCTGAGCTAGTGTCCGACCACTTCCATCAGCTGTACTCTCTCCAGAACCATCTTGATGTTGATGATGATGATGATGACCATTGGTCTGAACACAATGAGCAAGAGGATCGATCTCAGTTGCAGGAGCGGCTAGCCTTCTACCGCATCATAGGTTATCAGTTATCAATGGGTGGCAAGATTGACGAACTGGACATTGCAAAACTGAAGGAGAAGTACTCTCCTGAAATGCTTTATAACAAGGGGTATTTCCAGTACTATGAGGATAGTCTTGAATGGTACTTCGATCCTGAAAGATGCATGTTGACTAGCCTTGATGACTACCAGAGGCTAGTGCTTTGTGATAATGGTTTGTACATGGACTGGGATCAATACCACTCAAATTATAGTACCTACGAGAGTGATCTAGCATATGTCAAATTCTGTGAAGAGCTAGCAAATGAGACTAAGTGGTTTGAAGATTATTTGGTACTCATTGCTGTTAAGGATAAGGTAACCATTGGTCAGTGGGACAAAGTTAAAAATATAGTTTACCTTCAAGCACTGAAGATCGCACTACGCATTCGTGTTGTTTCTCTAATGCAAATTATGGCTGGTTTCCAGGAATATATATGGAGCATGCGGTTTGATTGTTGTAACTACAGGGATTTTGATGGTGTGTATTTTGAGGTTTGGAAGCGGGTTGCTAAGCAAAAGATGGAATTCACTGATGCTCTGTCGGAACTCTATAGAGAAGATATGTTTCCCTTGCGCAATGTTGATATTAAGGATGAGCTTGACAACATTCGAGTGAGAGCGGGATTCCATTCGATGAAGGAAAATTACGACATCTACGTGGCTTGCATTGACGAAACGGTGCCAGAAAATGAAGCTCGTCAATTGATCAAAGAGGCCGTCATAAAAATGAATCGAAAACCAGAGACTTATTTGGATTACGCCAGGAACAAGTTGCAAATCGCACAAGATATCGGTTTGATCACCAAAAGTACACAGGACTAG</cdnaseq>

Protein Sequence

<aaseq>MAAGSKKNPEPSSSSSSGDLGGKTVQELLDMDKDAVSELVSDHFHQLYSLQNHLDVDDDDDDHWSEHNEQEDRSQLQERLAFYRIIGYQLSMGGKIDELDIAKLKEKYSPEMLYNKGYFQYYEDSLEWYFDPERCMLTSLDDYQRLVLCDNGLYMDWDQYHSNYSTYESDLAYVKFCEELANETKWFEDYLVLIAVKDKVTIGQWDKVKNIVYLQALKIALRIRVVSLMQIMAGFQEYIWSMRFDCCNYRDFDGVYFEVWKRVAKQKMEFTDALSELYREDMFPLRNVDIKDELDNIRVRAGFHSMKENYDIYVACIDETVPENEARQLIKEAVIKMNRKPETYLDYARNKLQIAQDIGLITKSTQD</aaseq>

Gene Sequence

<dnaseqindica>1..267#415..600#769..870#950..1006#1105..1200#1278..1370#1487..1612#1719..1751#1836..1886#2022..2100#2201..2214#ATGGCGGCAGGGAGCAAGAAGAATCCAGAACCTTCCTCTTCTTCTTCTTCAGGCGATCTCGGCGGCAAGACCGTACAAGAGCTCCTCGACATGGACAAGGATGCCGTCTCTGAGCTAGTGTCCGACCACTTCCATCAGCTGTACTCTCTCCAGAACCATCTTGATGTTGATGATGATGATGATGACCATTGGTCTGAACACAATGAGCAAGAGGATCGATCTCAGTTGCAGGAGCGGCTAGCCTTCTACCGCATCATAGGTTATCAGGTAGTGTGTGTATCTAACTATCCCTTACTCTTAATCATCATTATATGTAGATATGATGAGCCAAATCCTGTGTATGTGTTTTTTGTTCGATGCATCTTCTCTTCTTTGTGTTAAAATTACTCTATGATGATCTGTCTTCTGTTGCAGTTATCAATGGGTGGCAAGATTGACGAACTGGACATTGCAAAACTGAAGGAGAAGTACTCTCCTGAAATGCTTTATAACAAGGGGTATTTCCAGTACTATGAGGATAGTCTTGAATGGTACTTCGATCCTGAAAGATGCATGTTGACTAGCCTTGATGACTACCAGAGGCTAGTGCTTTGTGATAATGTAGGTATCGTCGTGTCAAAATTTTGATTCCTCCATGACAACTACAGAAATTAATGCTTGCTTATTTCTGTCAGTTCTTGGTACAACCAACTGTGTTGCTATAATGGACGATGCCATAGTAGATGGCCGCTTGTGCAATTAATGGACCATGTGTTATTCTTTGTGTAGGGTTTGTACATGGACTGGGATCAATACCACTCAAATTATAGTACCTACGAGAGTGATCTAGCATATGTCAAATTCTGTGAAGAGCTAGCAAATGAGACTAAGGTATGACTGACTCAAGGTGAAAATACTGGCCATATGCCATCTAATCATCCTTGTCTGATGTCATTTATTCACATGGCAGTGGTTTGAAGATTATTTGGTACTCATTGCTGTTAAGGATAAGGTAACCATTGGTCAGGTAACCATCCCAAAAGCCATTTGTGCCTAATAAACTGTTGTGCAATGTATATTTATGTTATAATGCGTCAATTGATGGCAACTGTTTCCATTGTTTAGTGGGACAAAGTTAAAAATATAGTTTACCTTCAAGCACTGAAGATCGCACTACGCATTCGTGTTGTTTCTCTAATGCAAATTATGGCTGGTTTCCAGGTAATGCCTCCTGTTAATTTTAATTGGCAAGCATAAGTGGTGATGGTATTTAACAATAGTACTATCTTCTAATTTAGGAATATATATGGAGCATGCGGTTTGATTGTTGTAACTACAGGGATTTTGATGGTGTGTATTTTGAGGTTTGGAAGCGGGTTGCTAAGCAAAAGGTTAGATTACTTCAATGTGCACAACCATGCAACTTATGGTGCTTCTTTTTCTGTCCGTCATTTGCTTTATATTCTTACTTAGTGACGTATAATTATGCTATTTCATCTTCTATCAGATGGAATTCACTGATGCTCTGTCGGAACTCTATAGAGAAGATATGTTTCCCTTGCGCAATGTTGATATTAAGGATGAGCTTGACAACATTCGAGTGAGAGCGGGATTCCATTCGATGAAGGAAAATGTAGGTTCCTCTTCTCAGTTTTGTTACATCAGGATGATTTTGAACTCGTCAAATCATTTCGTCAATCCATCCATCCTTATCACAATTTTGTTTCTCTGTTGTCCAGTACGACATCTACGTGGCTTGCATTGACGAAACGGTAAGCCTGCATTTGCATGAGATTCATCCCTCAACTGGAATATGTTCTTCACATAAATCACACTGATGGAACATCTATGTGTAGGTGCCAGAAAATGAAGCTCGTCAATTGATCAAAGAGGCCGTCATAAAAATGGTTAGTGGATTTATTTCCCTATCAAGCAAACCTATCCTGGGTAGTAGTTGATAATTTTCCTAATTGATTATGGTGTTGAGTGCCTTCTCCGAATCGGTCCTATTTTGCTAATTCTGAGGCGAACTTTATCTTCAGAATCGAAAACCAGAGACTTATTTGGATTACGCCAGGAACAAGTTGCAAATCGCACAAGATATCGGTTTGATCACCAAAAGTACGCATACACTTCTCAACAGTGGGACATGATTTATATACATCTTTATAATGGGGACAAATCTGTGGATTCTAATTTTTCTTGTATTATTTACTTGTAGGTACACAGGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000069