BGIOSGA000070

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Revision as of 09:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000070| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000070, complete gene.| tag = P0483G1...")
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Gene Name

BGIOSGA000070

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000070, complete gene.

LocusTag

P0483G10.3

Ensembl Transcript ID

BGIOSGA000070-TA

Ensembl Protein ID

BGIOSGA000070-PA

Length

2922

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46428446..46431367

Sequence Coding Region

46431239..46431367,46430936..46431020,46430669..46430809,46430460..46430573,46429778..46429875
,46429627..46429703,46429453..46429558,46429120..46429247,46428888..46429032
,46428729..46428785,46428446..46428529

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46428446..46431367 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46428446..46431367 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGGGCGATCGGACTCATCACAAGCACTGGAATCAAGCTCATGTTCCCTCTGGAACTTCTAAGGACAAATTCCAGGCCAAAGGGCAACCGAAGTTTATTCCTGACAATTACAGCTCAGTGGATGAGGTTACTGCTGCGTTGAGAGACGCTGGTCTTGAGTCATCAAATCTGATTCTTGGTATTGACTTCACCAAAAGCAATGAATGGTCAGGCAGATATTCCTTTGGAAGAAAATCTCTGCATGCCATTAGTGCCACCCCTAATCCATATGAGCAAGCAATTTCTATAATTGGGCGAACACTGTCTCCTTTTGATGATGACAACTTGATACCATGTTTTGGATTTGGTGATGCTTCTACGCATGATCAGTCCGTCTTCAGCTTCTACCAAGACAGTCGTTCTTGCTGTGGTTTTGAAGAGGTTCTTGAAAGATATAGGCAAATTGTCCCACATTTGAACCTTTCAGGACCGACTTCTTTTGCTCCTCTTATCTACGCAGCAATTTCTGTTGTCGAAAATAGTAACTTGCAATACCATGTCCTCGTCATCATAGCTGATGGACAGGTGACCACCTCAAATACAAAGGATGGAAAATTAAGTCCGCAAGAACAAGCAACTATACAAGCAATTGTTGATGCAAGCTACTATCCTCTTTCAATTGTGATGGTTGGGGTGGGAGATGGGCCATGGGATGCGATGCAACACTTCGATGACTGTATTCCTGACAGAGCTTTTGACAATTTTCAGTTTGTGAACTTCACAGAGATTATGTCAACAAGTAAGGATATGCCAAAGAAAGAGGCTGCATTTGCCCTTGCAGCCCTTATGGAAATACCTTCTCAATATAAAGCAACTCAAGGCCTCCGACCACTGGAGAAGCATGCGGGTCATGTGGCCAGTCATCTGAGGATTCTTCCTCCTCCAAACAAAGTTCTTGAGAACGACAACGCTGCAGCCTCACGTCCTCCAACTGCAAGCTCCCAGTCAACTGGCTTCGGAAAGAATACCACTGATGAGCAGGTTTGCCCAATCTGCTTAACCAATCCAAAGGACATGGCTTTTCAATGCGGTCACCTGACATGCAAGGAATGTGGCCCAACTCTATCAACATGCCCCTTATGCCGCGTGCCAATTACGATGCGTGTAAGGCTCTACTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MWGDRTHHKHWNQAHVPSGTSKDKFQAKGQPKFIPDNYSSVDEVTAALRDAGLESSNLILGIDFTKSNEWSGRYSFGRKSLHAISATPNPYEQAISIIGRTLSPFDDDNLIPCFGFGDASTHDQSVFSFYQDSRSCCGFEEVLERYRQIVPHLNLSGPTSFAPLIYAAISVVENSNLQYHVLVIIADGQVTTSNTKDGKLSPQEQATIQAIVDASYYPLSIVMVGVGDGPWDAMQHFDDCIPDRAFDNFQFVNFTEIMSTSKDMPKKEAAFALAALMEIPSQYKATQGLRPLEKHAGHVASHLRILPPPNKVLENDNAAASRPPTASSQSTGFGKNTTDEQVCPICLTNPKDMAFQCGHLTCKECGPTLSTCPLCRVPITMRVRLYS</aaseq>

Gene Sequence

<dnaseqindica>1..129#348..432#559..699#795..908#1493..1590#1665..1741#1810..1915#2121..2248#2336..2480#2583..2639#2839..2922#ATGTGGGGCGATCGGACTCATCACAAGCACTGGAATCAAGCTCATGTTCCCTCTGGAACTTCTAAGGACAAATTCCAGGCCAAAGGGCAACCGAAGTTTATTCCTGACAATTACAGCTCAGTGGATGAGGTGACCAACTTACCAGCAAATCTTTTAATTAGTATTCTTGTGTTCATGTCTCAAGTCTAAACAAATTAATCTGCTACCTTTGATCTCTCCTTTAGATATAAGTTTATTCTCCAAAATTTCTTACCAATATTTTTCAAGCTCGAATATTCTTCACTACAGGAAAATGATGCCTGCAGCATCTGCTTGTACGTAACCTGTTACCTGTTTTGATTTTGAAGGTTACTGCTGCGTTGAGAGACGCTGGTCTTGAGTCATCAAATCTGATTCTTGGTATTGACTTCACCAAAAGCAATGAATGGTCAGGTGATGCTACTTCTGTATTGAGGATGTTACATACATTGGCTGTTTCCTTTAAGCCTTGCTATCAATTTTACTCGAGGATCCGTTTTGGTTTAAACAAACATTTTTTTCCCTGCTGAATTTCTGTAGGCAGATATTCCTTTGGAAGAAAATCTCTGCATGCCATTAGTGCCACCCCTAATCCATATGAGCAAGCAATTTCTATAATTGGGCGAACACTGTCTCCTTTTGATGATGACAACTTGATACCATGTTTTGGATTTGGTGATGGTAAGTTATATCTGGATTTCCTCTTTTCCCCTTACAAATTTGTTTTCACTAGTATACTTCCTGTATGAACTGCTACTATCTAATTCATTATGTAGCTTCTACGCATGATCAGTCCGTCTTCAGCTTCTACCAAGACAGTCGTTCTTGCTGTGGTTTTGAAGAGGTTCTTGAAAGATATAGGCAAATTGTCCCACATTTGAACCTTTCAGGTAAGAAGGGCATCATCCCCCTTTATTCAGTTCAGATTGTAGAATGATAACAGGTTATGATTTTCACTTACTATTTTATTTCAGTAACCACCAAAGAACAGTTCAGTCAATATTTAGCTGTTCTTTTTTTTTTTGCGGGGAATATTTAGCTGTTCTTTCTTCTAGCATGGATTATGATTTAGAGTAACCAATGTTTTGGTGTGCCATTTTATTTGTACAAGTTGTTTTTAAAAATATTCAATATTTCTTCTATCAAATTGTTATAGCATAGTACACACAGAGTTGTCCTTGAGAATGCTCAGCAATTTGGAAACTAGTTTTCAGTCATCACTTTTGCAGCTTTATTTGCTCATTATTCACGGCATCATGATTATATACTTCGTTGTTCTATTATTTGGTCTTGATTTCATTGAATTTTGAATAACTCCTGTAAATGAAAGGTATTGTCTAATGTAGCTCATTTGCTGTGTTTCACCGAATAATAATAACTCAATAAGCTGTTTGTAAGTAGTAGGTAACTCCACTAGCACTGCTGTTTTGTGCTTTTTGCCTGGTTCATTATTTTGTTCGACCGGTGTGTGCAGGACCGACTTCTTTTGCTCCTCTTATCTACGCAGCAATTTCTGTTGTCGAAAATAGTAACTTGCAATACCATGTCCTCGTCATCATAGCTGATGGACAGGTAATTGTTTACAGCCACTGAAAATTACTTATATAGCATTGCCAGCATGTGACTTACCTAAGCAAAAACTGTAGGTGACCACCTCAAATACAAAGGATGGAAAATTAAGTCCGCAAGAACAAGCAACTATACAAGCAATTGTTGATGCAAGGTAAATTAAATTCGTCCTTGGTTAGAACTTGGTGTTAAAGTTTTACTGAAACCCATTTGGTTGCTCAGCTACTATCCTCTTTCAATTGTGATGGTTGGGGTGGGAGATGGGCCATGGGATGCGATGCAACACTTCGATGACTGTATTCCTGACAGAGCTTTTGACAATTTTCAGGTGATTATAATACTACTATTTTGTCATTTCAATTCCGAAATTTCAACATTGCTCCACTTATGCATGAGCAAACTGATGATTCCAGTGAGAAATCATACTACGTTGAATGTAAATAATCTACTTTCTGACTAGAAGAGACTTGTATAGTGATTTCATATCTATTTATTTAGCTAGAAGTTAGAATCTTACTAATAAACTACTGCAGTTTGTGAACTTCACAGAGATTATGTCAACAAGTAAGGATATGCCAAAGAAAGAGGCTGCATTTGCCCTTGCAGCCCTTATGGAAATACCTTCTCAATATAAAGCAACTCAAGGCCTCCGACCACTGGAGTACTTGCTCTTCTCAGTTCATTGCAGCCCTGCATTAGTTTCATAGCATCCTTATCACACACTTTGTTTCTTCATTTTTATTAACAGGAAGCATGCGGGTCATGTGGCCAGTCATCTGAGGATTCTTCCTCCTCCAAACAAAGTTCTTGAGAACGACAACGCTGCAGCCTCACGTCCTCCAACTGCAAGCTCCCAGTCAACTGGCTTCGGAAAGAATACCACTGATGAGCAGGTAGGCACAATTTGGGCAAGTAGCTCTTGATGAGTTTAAACATTTTTTTTTCTCCAGAACTGTGGCATAACTCTTATTATTTTCTTTTATGGCATCATCAAGGTTTGCCCAATCTGCTTAACCAATCCAAAGGACATGGCTTTTCAATGCGGTCACCTGGTAAGGTTTTCTATGCTGTGGCATGAGTTCTGTTGGTGAAATCAAATTATGAAATCTATGCTGGCATATGTATAACTATATTTCTAGTGAAACTGTAGGTGAACATAGTGGAATCGTATTTTTTTTCCAAAATTTGAAATGATTAAATCAGTAGTAGTTTGAGGGATTAACAGATCTTCTTTACTTCTGTTTGTTCAAGACATGCAAGGAATGTGGCCCAACTCTATCAACATGCCCCTTATGCCGCGTGCCAATTACGATGCGTGTAAGGCTCTACTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000070