BGIOSGA000072

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Revision as of 09:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000072| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000072, complete gene.| tag = OsI_052...")
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Gene Name

BGIOSGA000072

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000072, complete gene.

LocusTag

OsI_05295

Ensembl Transcript ID

BGIOSGA000072-TA

Ensembl Protein ID

BGIOSGA000072-PA

Length

3570

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46409419..46412988

Sequence Coding Region

46412811..46412988,46412560..46412699,46411966..46412057,46411705..46411818,46411089..46411231
,46409682..46409812,46409419..46409538

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46409419..46412988 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46409419..46412988 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGCTCCGCCTCCGTCCGCCGCCGCAGCCGGCCGCCAGCCTCGCATCCTTCCTCCCCTTCTCCCCCTTCAGGCGCTTCCTCCACTCGCCGTCCTGGCGCCCTCCTCCTCCTCCTCCTCCGCGCCGCCGCCGCCTCCTCTCCACTGCCGTCGCCTCCTCCTCCTCCTCCTCCAAAGGCTCGACAAGTCTTGAGGAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGTGAGGCCGCGCTTGCGTCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATTGATCGGATTGCGTGGCAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTTGTTCATGAGGTAGATGCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTGCTACCTACAAAAGCGTGTGCTAAACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACTGACAAGAGGGAGTATGCAGTAGAGATGAAGAAAGTTGTTGAAAGCACACAAAATCTTTTCATTAGAGAGGCAATGGCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTCCGCACTTTCTTCGGCATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGATGCAAACAAAACTGGAGCTGCCCAGGAAGCTATAAATGGTATTCGAAGGGCCAGCAAGGCCATGACTGAGCAAGAAGCCCGGCAAATACTAGGTATCAGCGAAAAGTCGACTTGGGAAGAGATCGTCCAGAAATACGATACTATGTTTGAGAGGAATGCTAAGAATGGGAGCTTCTATCTCCAGTCGAAAGTTCATCGGGCTAAAGAATGTCTAGAAGCTGTATATCAAAAGCCCGACGTACCTAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MLLRLRPPPQPAASLASFLPFSPFRRFLHSPSWRPPPPPPPRRRRLLSTAVASSSSSSKGSTSLEERYDVIVVGGGHAGCEAALASARLGARTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHEVDALGGEMGKIADRCYLQKRVLNSSKGPAVRALRAQTDKREYAVEMKKVVESTQNLFIREAMATEVMIGQNDNVEGVRTFFGMDFYAPSVVLTTGTFMSDANKTGAAQEAINGIRRASKAMTEQEARQILGISEKSTWEEIVQKYDTMFERNAKNGSFYLQSKVHRAKECLEAVYQKPDVPS</aaseq>

Gene Sequence

<dnaseqindica>1..178#290..429#932..1023#1171..1284#1758..1900#3177..3307#3451..3570#ATGCTGCTCCGCCTCCGTCCGCCGCCGCAGCCGGCCGCCAGCCTCGCATCCTTCCTCCCCTTCTCCCCCTTCAGGCGCTTCCTCCACTCGCCGTCCTGGCGCCCTCCTCCTCCTCCTCCTCCGCGCCGCCGCCGCCTCCTCTCCACTGCCGTCGCCTCCTCCTCCTCCTCCTCCAAAGGTAACGCTGCTCACCTCGTAGTGGTCGATGGGGATCTGAGTATTTGCGACCACATGAAACAAGCGAAAACGATTCTAATTGATGGATGGGTTTCTGCTATTCTGGCATTAGGCTCGACAAGTCTTGAGGAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGTGAGGCCGCGCTTGCGTCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATTGATCGGATTGCGTGGCAGGTCTAACACTGAGCTCCATTGCAATTTTTCACTTACTAGATTTCTTCATTTGTGTACTACCATATCCTTCCATTAGACCAAATTGTACTTTCTTTATGATTCCTGTATCTTGGTTACAAAAGCAAAGTTAGGTAGTAAAAGATCATATGCTAAAAATATGTGGTCATTGATTCCTTGTGGCATAGTTAGTTAAAATCTGCAATCATATACCCCATACAACATGAAGCAAGCAATTGAACCATGTTTCATAAGACTTGTATAAGTGCATGTCAAATCCACGGATTTTTCTTAGAAAATATGATATGGCATGTATAGTGGATGAAATGCTTACATACATACATTTTTGGAACTCATAGTACAAGGATAGTTTCCAACGTGGTATGTCCTCAGTCTAGGCTATAAGGATCTTAGCAAATCAACCTTTTTAACAAAGGGAACATTATGTTACTATTGTAATATGGCTACCTGTCCTAACTCTTCTTTTATTCCTTATGTTGCATAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTTGTTCATGAGGTAGATGCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTACATTTAATTGGTTCATTATTTTAGATAGATAGATTTTCTTTTCCCCTACTTTTTGGACTTTTAGTTGGTGTGTAGGTCTGAGAGATGAAACCTGCACCGAAATCCTCAAAGATCTATTGTCATACTGATTACTTCATCTCTTAGGTGCTACCTACAAAAGCGTGTGCTAAACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACTGACAAGAGGGAGTATGCAGTAGAGATGAAGAAAGTTGTTGAAAGGTCAATATGCACTCTCGTCTTTTATCAGAATTTACAAACTATATTCGAATTTGTTTGCCTTTTAGGTAAATCAAAAGACACCAAACTACTCCCTCCTGATTTCTGAATAAGAGCGAGCGTGCTGTGTAAATTCTGAATTGGCTGGAGTTATTCACGCGTTTCAGATATTCTTAAGTTGTACATGGTTATCCACAGAGTCACAAGGCTTGTGTTTTATTAGTTTAACCTATGAAGACAACTTCATTCATTTGACATGTGTTTTGATTGGTCCTGACCAAAGACTATTGACTAGATGTTAATTCTAATTTCTTGAGTAGAGGTGAATCTGTTTCTGCATATCTTTTACCTATAAATTCAACAAATATAGTTGATGTGTTCTTGTGATATCTAGAAATATGTTGTTGTTGAATGCAGGTACTTTAGTGTAATATCTTTCATGTTATTTACTGATTATTGCATATGCTATTTTTCAGCACACAAAATCTTTTCATTAGAGAGGCAATGGCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTCCGCACTTTCTTCGGCATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAGGTATGGAACATCTGACAATATGTATGAGTGAAGTTTTTTGTTATTCGTTATATACAAGTGTCATCTTCCACTTGTATCTGAAAATGCAAATTCCGTCATTCTTATATACTTTTGCTTCTCTCTTTCATTTGCCACTTTACATTTCATTGTTAAAGCAACGCCTTTTGTACTCTTATTAGTAAGATCTAGAAGCACTGTGCTTCTGTTGTGACAGTTAATTTGGTTTCTCTCTGATTAGAAGTCAAAATTTCAAAAGCACCCCTTGAATACAGTGTTCGTTTTATGTAATGATTGATCAAAGTTGTGAACCCTTGTGGATAATTGATTCTTTTGCTATCGATCTGGCACAGAAAATAGATTGAATGGACTTTGCACATTTGAACCTTCTTGTTCAAATATTTCCAAATGTATGTGGTATTTTCTCCGATAGACTTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATTTAAATAACATTTGATAAAATCAAAATGATGCCTTCAACTTGATTCAGCTTTTGCATCATGGTTCTTTAGTAGTTCAGTTCACATCCTTGTTATGCCTATGTGGATCATACAACAATTTTAGGCTGTGCTTGTAACCTGTAACTTTTGATGATTCTCGATCATGACTGAGTTAATGGGATATTGCATATACTGTTCCAAATAGTTTGCTTGAAGATTAGCAGACTGTTGATTGCATATGATTGTGAACTGTCTGATAATTTTCCAGTACAGATATTGTTGAACATAGCTTTTTCCTGCCATAACCTTCTACCAATATTCATGCTAAAACATCTAATTCTTTTATTATTATCTAAAGCGACATCTGTGAATTTGTGACTGCATTGCTAAATGTTCCATGGCACACATTTTTTTCTGAAAGGCAATCAATGATTTTGCGGTCCATTCTAAATGTTGCTCAACATAGCTTAAGTAGCCTACTTTATATGCTTCCAATTTATATGGAAGCATTTGCTTCCTTTGCATCTCTTTTGACTATACCATCCATGCCACGCATTCCCTAATGAAATTAATAATAAATTCTACCTTTGTCCTGTAGATGCAAACAAAACTGGAGCTGCCCAGGAAGCTATAAATGGTATTCGAAGGGCCAGCAAGGCCATGACTGAGCAAGAAGCCCGGCAAATACTAGGTATCAGCGAAAAGTCGACTTGGGAAGAGATCGTCCAGGTTTGTGACAATGTGCTTTCATTAACTTGATACGTTCCAGCAAATCAATTTTCTACCAATTAAGACTGTTAAAAGCACATGGCAGTCATTTGCTCTAGCCAGAAACTAGCATTGAATTTCTATCTTGTTGAAATACTTTGCAGAAATACGATACTATGTTTGAGAGGAATGCTAAGAATGGGAGCTTCTATCTCCAGTCGAAAGTTCATCGGGCTAAAGAATGTCTAGAAGCTGTATATCAAAAGCCCGACGTACCTAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000072