BGIOSGA000077

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Revision as of 09:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000077| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000077, complete gene.| tag = OS01G09...")
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Gene Name

BGIOSGA000077

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000077, complete gene.

LocusTag

OS01G0958800

Ensembl Transcript ID

BGIOSGA000077-TA

Ensembl Protein ID

BGIOSGA000077-PA

Length

3057

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46319914..46322970

Sequence Coding Region

46322855..46322970,46322649..46322750,46322469..46322542,46322302..46322373,46322192..46322220
,46321795..46321845,46321213..46321272,46321048..46321130,46320544..46320691
,46320393..46320443,46320144..46320248,46319914..46320045

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46319914..46322970 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46319914..46322970 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAAATCAGGCGCTGATTCCGTCTCAGCCGCCCGGCTCTATGATGCGCGCTCTTCCTCTGCGTGATCTACAGGCTCGTACTACCGATGCGCCGTTGATTTCTGCAGGGCGCAGATCGGCCTGCGGCGCGAGCTCGGGAGCTGTATACATGGAGAAAGCGAGGTTGAGAGCTTTCCAGAGGGAGCAAGCCACGGCCAAGACATGTATGGTCTCCAGCTTTGCGACGGATTTTCTCGAGATAAGGGCCAAAGAGCCGTCTGTTCATGTTCTGGTTATTCCCGGAAATCCAGGTATCGTTGCATTCTACAAGGACTTTGTTGAAGAGCTCTATGAGAACCTCGGTGGGCAAGCATCTATTACAGCGATTGGGCATATTTCACATAGCAAAAAGGTCGATTTCATTGAGCAAGAATTTCAACATTCGGAACAATCATTAGTTCTGGTTGGTCATTCAATTGGTGCCTACATATGCCTGGAAATCTTCAAAAGACTTCAGAAGAAGGTGAAACTTTGTGTAGGACTCTATCCATTTTTAACACTCAACAAGAAGTCCATGAAGCAATCAGCTATTGGATATATTGCAAGGTCATCTCTCCTAAGTAAAGGGGTTAGCTCATTTGTTTCTTTTATCGGATTACTCCAAGCTTCAGTAACTAGGGGCATCGTGAGAAGGTTACTTGGACCTTCATGGTCTGTAACGGCTGTCGAAGCTACATGCGGCCATCTCTTATGGTACCATACGATGCGTAATGTTCTCTTCATGGCAATGACAGAGTTCACGAAGCTCTCTGAAGAACCGGACTGGAATTTCATCAGTGCAAAACAGGACCAGATTGCATTTCTGTTTGATGTGGACGATCACTGGGGTCCGCTTGCACACTTGGAAGAGATCTCAAAGCGTGCTCCTGGGGTTGCCTTGTCTGTCGAAACTGAAGGCCATACACACGGCTATTGCTGCACGGAAGCTGGATCGTTTTGGGCTGCAGACTACGTGGCTAATTTGATTAAAACTAAATTCTGA</cdnaseq>

Protein Sequence

<aaseq>MANQALIPSQPPGSMMRALPLRDLQARTTDAPLISAGRRSACGASSGAVYMEKARLRAFQREQATAKTCMVSSFATDFLEIRAKEPSVHVLVIPGNPGIVAFYKDFVEELYENLGGQASITAIGHISHSKKVDFIEQEFQHSEQSLVLVGHSIGAYICLEIFKRLQKKVKLCVGLYPFLTLNKKSMKQSAIGYIARSSLLSKGVSSFVSFIGLLQASVTRGIVRRLLGPSWSVTAVEATCGHLLWYHTMRNVLFMAMTEFTKLSEEPDWNFISAKQDQIAFLFDVDDHWGPLAHLEEISKRAPGVALSVETEGHTHGYCCTEAGSFWAADYVANLIKTKF</aaseq>

Gene Sequence

<dnaseqindica>1..116#221..322#429..502#598..669#751..779#1126..1176#1699..1758#1841..1923#2280..2427#2528..2578#2723..2827#2926..3057#ATGGCAAATCAGGCGCTGATTCCGTCTCAGCCGCCCGGCTCTATGATGCGCGCTCTTCCTCTGCGTGATCTACAGGCTCGTACTACCGATGCGCCGTTGATTTCTGCAGGGCGCAGGTAGGTAGGCCGGAGACGAACGCCTTTGATTTCTCGCATCGCATCGCAGCTTAGTTAGTAGCGAGCTCACTGTGTTTCATCGGTTAGCACTTGAGGTTGTTTAGATCGGCCTGCGGCGCGAGCTCGGGAGCTGTATACATGGAGAAAGCGAGGTTGAGAGCTTTCCAGAGGGAGCAAGCCACGGCCAAGACATGTATGGTCTCCAGGTATCTTGCATTGCGTCTGGCTTCCTAGCAGTTTGGCTTAGGTTGAGTAAAATTTCACAGCGTGGGTTGTTGATTTCTATTGTTACAAGCAAGCAATTCTGTGCAGCTTTGCGACGGATTTTCTCGAGATAAGGGCCAAAGAGCCGTCTGTTCATGTTCTGGTTATTCCCGGAAATCCAGGTTAGTGGCACACTGAAGATCGGTGAGAATTGATGTGTTGCATTGCTCATGAAAGAGTATTGAGGTCATTGGAGAATCCTGTTGCTGTTTGGCAGGTATCGTTGCATTCTACAAGGACTTTGTTGAAGAGCTCTATGAGAACCTCGGTGGGCAAGCATCTATTACAGGTAAGTGTGGTGTAATCTATGCATTTTTTGTATGGACTATCTATGTGGCTTGCTGCTTGCTGATAAATTTTCACTATGCAGCGATTGGGCATATTTCACATAGCAAAAAGGTAATGTATAGCTTTGCTTTACCTGTTTACCTCAAGTTGCAGCTGATTTTCACAAAATTCATAACAGGATGCAGAGCGTGGACCATTGTTTTCGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTCCAATCATGTTGAAAGCATCCTTATTCCACTCTCTCTTCCCTTACTCAAATTGTTCTGGAAATGATTTATGTTCTTTTATCNTGTGTGGTTGCTGCTATAACACCCCCCCCCCCAACCAACCCTCCCTCCCCAATCCCCTCATCACCCCTGAGAAAGACACGTCTTTCTGGTTTAATCCATTTACATGCATGCAGGTCGATTTCATTGAGCAAGAATTTCAACATTCGGAACAATCATTAGTTCTGGTATGCCTTGCCTTCACTACCACAAGCCTTCTTTGGTTAAAGTTATGTTTTTATTTGGGTGCTGTCTGGATATTCAAGTACTTTTAGTATATACCATTATACATATCTACATACGATTTAAAGTTTAAATATTGTGATTCTAATTGACCTTTAGAAAAGGACAAGCCTCTGGTTCAAATATCTTCAGAATATGACGAGATTTGTGAAATCCAAAAGTTTTCTGTAGTACAAAATTTTATCGTTATTCCACTACTTGATTGCCTAGTCCAAGTTCATTAGTCTAGGATCGATTTTTTTTTTATGAATTTTGCTTTCACATGCACAATTCATCTTGGTTCTTTTGTGTATTTTGACATCACATCATTATATCTCCATTCATCACTGTAATGAGAAAATATTGCTCTGAGATCACGATAGTATTGTTATCTGTCCAAGTATGTGTGCTCAATACTTGAAAACCGTGTCCAAATTATTTTTCTGTATGAAGCCATTCACCTTGATTATTTCATCTTACTAATGAAGGTTGGTCATTCAATTGGTGCCTACATATGCCTGGAAATCTTCAAAAGACTTCAGAAGAAGGTATGGATACCTGTCCAAGTCGGACAATTCTTTACCGCAATGTGTTATTGCTTCACTTTCTGTGTTCGTTTCTCCTGGACAGGTGAAACTTTGTGTAGGACTCTATCCATTTTTAACACTCAACAAGAAGTCCATGAAGCAATCAGCTATTGGATATATTGCAAGGTACTGAAATGCTCTGGATAGTGATGAAGTTGTTTACAATTGTCAATATAGTCATATCCTGATAGGCTAAATATAGTCAGAAAATCAAGTGGTGCGACATATGGGAAGGCCAAACTTAAAGTTTGCCTGCATTTTCATTATTTATTGACAAATGCAACATATGAGACCATACATTATAAGTTGCTAAACAAAGTCTTTCAATAGGTATTCAATTAGTGTTGTTCATCTTTTGAGTGTTGTTTTGGACTTTTGGTGGTTAACTTTTGGCATGAGTTCCCAAGGGCAAAGATTATATTATCTAGTCCCCAGTTGACTTTCATTTTGCTTACATGGGTTTTCTCAACTGGGCATGGCAGGTCATCTCTCCTAAGTAAAGGGGTTAGCTCATTTGTTTCTTTTATCGGATTACTCCAAGCTTCAGTAACTAGGGGCATCGTGAGAAGGTTACTTGGACCTTCATGGTCTGTAACGGCTGTCGAAGCTACATGCGGCCATCTCTTATGGGTGAGTTCTGAGCTTCACCATCCCACTAAGAGAGATGTCTTATATGTTTCTACTATCTGAAAATGTCTGAGACATTACTCCTTTATGGCAAATTGTGCAGTACCATACGATGCGTAATGTTCTCTTCATGGCAATGACAGAGTTCACGAAGGTGGTTTTTTTTCCCCCACAATGTTGGCATTACTATTTAAAAGCACAAGAGTATACTCAGTAGAGTAGACAACTTTACAACTAACATGGAGCCATTCTCCGTTTTACCTGTCTAGCTTTTCTTAACTATTTTAATGCATTCCAGCTCTCTGAAGAACCGGACTGGAATTTCATCAGTGCAAAACAGGACCAGATTGCATTTCTGTTTGATGTGGACGATCACTGGGGTCCGCTTGCACACTTGGAAGAGGTGAACAGATCATTTGCTATTCCAAAACTGCTCTTATTATTGTACTTACGATCCTGACCATCTTGCTTATGTTAACTTGTCGCTCCGAGAATTGACAGATCTCAAAGCGTGCTCCTGGGGTTGCCTTGTCTGTCGAAACTGAAGGCCATACACACGGCTATTGCTGCACGGAAGCTGGATCGTTTTGGGCTGCAGACTACGTGGCTAATTTGATTAAAACTAAATTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000077