BGIOSGA000079

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Revision as of 09:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000079| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000079, complete gene.| tag = OS01G09...")
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Gene Name

BGIOSGA000079

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000079, complete gene.

LocusTag

OS01G0958100

Ensembl Transcript ID

BGIOSGA000079-TA

Ensembl Protein ID

BGIOSGA000079-PA

Length

2622

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46289509..46292130

Sequence Coding Region

46291834..46292130,46291618..46291722,46291453..46291526,46291309..46291367,46290712..46290749
,46290433..46290553,46290270..46290338,46290093..46290175,46289861..46289929
,46289709..46289771,46289509..46289622

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46289509..46292130 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46289509..46292130 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCACACTCCCACGTCATCCCCTTCCTCTCCCCGGCGGCGACGTCCGCGCGCTGCTCCCCCTACGGCCACCGCCGCCGCGGCCGCGCGGGGCTCCTGCGGTGCGCGGCGGCGGCGGGGCAGGCGGGGTTCTTCACCCGCCTGGGACGCCTCATCCAGGAGAAGGCCAAGAGCGACGTCGAGAAGCTCTTCTCCGGCTTCTCCAAGACCCGCGAGAGCCTCTCCGTCGTCGACGAGCTCCTCACCTACTGGAACCTCGCCGACACCGACCGCGTCCTCGACGAGCTCGAGGAGGCTCTGCTGGTGTCGGATTTTGGCCCCAAGATTTCGTTCCGGATCGTGGACACTCTACGCGAGGAAATCCGCGATGGCAAGCTCAAGTCTGGGGCTGAGATAAAGGAAGCGCTGAAAAGGTGTATTCTTGAACTGCTGACGAGCAAAGGCGGCAATCCGGAGCTGCAGCTCGGTTTCAGAAAGCCGGCAGTTATCATGATTGTGGGAGTGAATGGAGGTGGAAAGACTACCTCATTAGGAAAACTTGCTTACAGATTCAAGAATGAAGGAGTGAAGGTATTGATGGCAGCAGGTGATACCTTCAGAGCAGCAGCTCGTGACCAGCTAGAAGTTTGGGCAGAGAGAACAGGTTCAGAGATTGTTATCGATAATGATAAGAAAGCAAAACCTGCATCAGTTCTCTCGCAGGCAGTGAAGCGCGGGAAGCGTGAAGGATTTGATCTTGTTCTTTGCGACACGTCAGGACGACTTCATACAAATTATGGTCTGATGGAAGAATTGGTTTCCTGCAAGAAAGTCATAGCTAAAGCCCTTCCGGGTGCTCCTAATGAGATCTTGCTGGTTCTGGATGGCACGACTGGCTTGAATATGCTACAACAAGCGAGGGAGTTCAATGATGTTGTTGGAGTCACAGGATTCGTCCTAACAAAGCTTGATGGAACTGCTCGTGGTGGTTGTGTGGTTAGCGTTGTAGATGAACTTGGAATTCCAGTAAAGTTTATTGGTGTTGGTGAAGGGATGGAGGATCTTCAGCCTTTTGATGCTGAGGCATTTGTTGAAGCCATTTTTCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAHSHVIPFLSPAATSARCSPYGHRRRGRAGLLRCAAAAGQAGFFTRLGRLIQEKAKSDVEKLFSGFSKTRESLSVVDELLTYWNLADTDRVLDELEEALLVSDFGPKISFRIVDTLREEIRDGKLKSGAEIKEALKRCILELLTSKGGNPELQLGFRKPAVIMIVGVNGGGKTTSLGKLAYRFKNEGVKVLMAAGDTFRAAARDQLEVWAERTGSEIVIDNDKKAKPASVLSQAVKRGKREGFDLVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAREFNDVVGVTGFVLTKLDGTARGGCVVSVVDELGIPVKFIGVGEGMEDLQPFDAEAFVEAIFP</aaseq>

Gene Sequence

<dnaseqindica>1..297#409..513#605..678#764..822#1382..1419#1578..1698#1793..1861#1956..2038#2202..2270#2360..2422#2509..2622#ATGGCGGCACACTCCCACGTCATCCCCTTCCTCTCCCCGGCGGCGACGTCCGCGCGCTGCTCCCCCTACGGCCACCGCCGCCGCGGCCGCGCGGGGCTCCTGCGGTGCGCGGCGGCGGCGGGGCAGGCGGGGTTCTTCACCCGCCTGGGACGCCTCATCCAGGAGAAGGCCAAGAGCGACGTCGAGAAGCTCTTCTCCGGCTTCTCCAAGACCCGCGAGAGCCTCTCCGTCGTCGACGAGCTCCTCACCTACTGGAACCTCGCCGACACCGACCGCGTCCTCGACGAGCTCGAGGAGGCGCGTCCCCTGCTCCACTGCTCTGCATGCTGTTCTCTCCTTCTTCACTGTTCGGCGCTGCTTCTGTCTTCGTTTTTTTTGAATGTTTCCTGCTTGGTCTCGTGCACGCAGGCTCTGCTGGTGTCGGATTTTGGCCCCAAGATTTCGTTCCGGATCGTGGACACTCTACGCGAGGAAATCCGCGATGGCAAGCTCAAGTCTGGGGCTGAGATAAAGGTCATTTCAGTTTCCTCTTAGTGTACATTGACATCGGCATTGTGATTGGTCTGATGATTCATTTTGTCATCTGTGGTGGTTGATTGTGCAGGAAGCGCTGAAAAGGTGTATTCTTGAACTGCTGACGAGCAAAGGCGGCAATCCGGAGCTGCAGCTCGGTTTCAGGTTCTGCTTTCTCCTGAATTCCTGCTCAGTGCCATTTGTTGCTTGCTGTTTGTAATTTGAGCAATGTTGTTCATCGTTATGGCAGAAAGCCGGCAGTTATCATGATTGTGGGAGTGAATGGAGGTGGAAAGACTACCTCATTAGGTACTCCTCTTGCATGCTTGGCTTTGTTAAGCTTAGATGTTTTTGTTCCATTCTGATAGATGGTCAATAAACGGTAACACACTCTCCTATGGTCCTACCCTAGTACCCTACTATATGGACAATTGACATTATGATGATGTTCTAAAGGCACAACACATGGTTATATAGGCACGCAAGTGCATTTGTGAAGGAAAAGATATTTGGTTATAAAAGCACAATACTGTAATTAGGCCATCACAAGATTATCTCTTATACACCAATGTACTAGTTACTCGAAGTGAATTTATCACGCCTATGTAAGGTATTTTCAGCTCAATGCAAAACTACTTGCATATTAAGCTTGGATTGTGGCATAGCATTGGATTAAGCTTCTGCAGGTTATCTTGTCGCTTTAAAGCTAATATGGTACCTAGATAGTAAGGAGCTCCTCAATATGCAGTTCTGGTTCGGGCATTTTCTACCATCTGCATCTGGCATCACTATTTAGTTTGGAACGTTTTATACAGCATGATGCTTTGAAGTGGAAGATTGATCTTACTCCTTTTTTATGTATTTGTAGGAAAACTTGCTTACAGATTCAAGAATGAAGGAGTGAAGGTGAGGCTATTTTCTAGACATACCCTGGTTTATAGGCTAGATGCATGGGAATTAAATTCAGCTATGTACATATTGCCTCACCACATTCTCTGAACATGTAATATTGTACAATAGATCAAAATAATGAGTTCATGTTCATGCTTTCAACAATAATATAGGTATTGATGGCAGCAGGTGATACCTTCAGAGCAGCAGCTCGTGACCAGCTAGAAGTTTGGGCAGAGAGAACAGGTTCAGAGATTGTTATCGATAATGATAAGAAAGCAAAACCTGCATCAGGTATGATTTTTTGATCTGCCAAGCATTGTGATCACACTCTGTTCTCATAAGGAGGTTAGCTTCTATGTTTCATCTAATTTGACTTGCTTGGTAGTTCTCTCGCAGGCAGTGAAGCGCGGGAAGCGTGAAGGATTTGATCTTGTTCTTTGCGACACGTCAGGACGTATGATTATTTTAGTGACTGAGAGCAGAATATGCATATGTTTGGTGATTTGCTGATTGGTTGAAATGACTTTGTTTCAGCACTTATTTTTCAGGACTTCATACAAATTATGGTCTGATGGAAGAATTGGTTTCCTGCAAGAAAGTCATAGCTAAAGCCCTTCCGGGTGCTCCTAATGTATGCTGTGTTTACATGCAAAGGACTTGATTTTGTGTTGATTGGATCATTTTGGCATGTGCAGTACTTTTGAGGGCAAGCTTAGAGAAGCACGGTTATGATTCTAATACTTCATAGCGCTCTCATTGTTATTAACTACTAGCATATATTCCTTGCTTAACAGGAGATCTTGCTGGTTCTGGATGGCACGACTGGCTTGAATATGCTACAACAAGCGAGGGAGTTCAATGATGTAATCACCATTTCCTGGTTATTTTGGTACTCCTGATTTTTCTTTTTTTTTTCATCAAGATATAACGAACTCTGTTGGCTTAATGCCAGGTTGTTGGAGTCACAGGATTCGTCCTAACAAAGCTTGATGGAACTGCTCGTGGTGGTTGTGTGGTATACACATATTCCTTGCCATATGCAGTTTATAAACAACAACATTTTAGTGGTTCACCTGAATTTTGTTGTTTGATCTATTGCAGGTTAGCGTTGTAGATGAACTTGGAATTCCAGTAAAGTTTATTGGTGTTGGTGAAGGGATGGAGGATCTTCAGCCTTTTGATGCTGAGGCATTTGTTGAAGCCATTTTTCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000079

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000079&oldid=37803"